Carl-Johan Rubin

An intronic copy number variation in Syntaxin 17 determines speed of greying and melanoma incidence in Grey horses

Rubin, Carl-Johan; Hodge, McKaela; Naboulsi, Rakan; Beckman, Madeleine et al.

Part of Nature Communications, 2024

• DOI for An intronic copy number variation in Syntaxin 17 determines speed of greying and melanoma incidence in Grey horses
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Complex genetic architecture of the chicken Growth1 QTL region

Ou, Jen-Hsiang; Rönneburg, Tilman; Carlborg, Örjan; Honaker, Christa F. et al.

Part of PLOS ONE, 2024

• DOI for Complex genetic architecture of the chicken Growth1 QTL region
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Selection against domestication alleles in introduced rabbit populations

Andrade, Pedro; Alves, Joel M.; Pereira, Paulo; Rubin, Carl-Johan et al.

Part of Nature Ecology & Evolution, 2024

• DOI for Selection against domestication alleles in introduced rabbit populations

Whole-genome selective sweep analyses identifies the region and candidate gene associated with white earlobe color in Mediterranean chickens

Guo, Ying; Rubin, Carl-Johan; Rönneburg, Tilman; Wang, Shouzhi et al.

Part of Poultry Science, 2024

• DOI for Whole-genome selective sweep analyses identifies the region and candidate gene associated with white earlobe color in Mediterranean chickens
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Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes

Jayaprasad, Suvratha; Peona, Valentina; Ellerstrand, Simon J.; Rossini, Roberto et al.

Part of Molecular Ecology, 2024

• DOI for Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes
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An intronic copy number variation in Syntaxin 17 determines speed of greying and melanoma incidence in Grey horses

Rubin, Carl-Johan; Hodge, McKaela; Naboulsi, Rakan; Beckman, Madeleine et al.

Part of Nature Communications, 2024

• DOI for An intronic copy number variation in Syntaxin 17 determines speed of greying and melanoma incidence in Grey horses
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Complex genetic architecture of the chicken Growth1 QTL region

Ou, Jen-Hsiang; Rönneburg, Tilman; Carlborg, Örjan; Honaker, Christa F. et al.

Part of PLOS ONE, 2024

• DOI for Complex genetic architecture of the chicken Growth1 QTL region
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Selection against domestication alleles in introduced rabbit populations

Andrade, Pedro; Alves, Joel M.; Pereira, Paulo; Rubin, Carl-Johan et al.

Part of Nature Ecology & Evolution, 2024

• DOI for Selection against domestication alleles in introduced rabbit populations

Whole-genome selective sweep analyses identifies the region and candidate gene associated with white earlobe color in Mediterranean chickens

Guo, Ying; Rubin, Carl-Johan; Rönneburg, Tilman; Wang, Shouzhi et al.

Part of Poultry Science, 2024

• DOI for Whole-genome selective sweep analyses identifies the region and candidate gene associated with white earlobe color in Mediterranean chickens
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Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes

Jayaprasad, Suvratha; Peona, Valentina; Ellerstrand, Simon J.; Rossini, Roberto et al.

Part of Molecular Ecology, 2024

• DOI for Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes
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Long-read whole-genome analysis of human single cells

Hård, Joanna; Mold, Jeff E; Eisfeldt, Jesper; Tellgren-Roth, Christian et al.

Part of Nature Communications, 2023

• DOI for Long-read whole-genome analysis of human single cells
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Community-wide genome sequencing reveals 30 years of Darwin's finch evolution

Enbody, Erik D.; Sendell-Price, Ashley T.; Sprehn, C. Grace; Rubin, Carl-Johan et al.

Part of Science, p. 1427-+, 2023

• DOI for Community-wide genome sequencing reveals 30 years of Darwin's finch evolution

A frame-shift mutation in COMTD1 is associated with impaired pheomelanin pigmentation in chicken

Bi, Huijuan; Tranell, Jonas; Harper, Dawn C.; Lin, Weifeng et al.

Part of PLOS Genetics, 2023

• DOI for A frame-shift mutation in COMTD1 is associated with impaired pheomelanin pigmentation in chicken
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Rapid adaptive radiation of Darwin's finches depends on ancestral genetic modules

Rubin, Carl-Johan; Enbody, Erik D.; Dobreva, Mariya P.; Abzhanov, Arhat et al.

Part of Science Advances, 2022

• DOI for Rapid adaptive radiation of Darwin's finches depends on ancestral genetic modules
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Spatiotemporal variations in retrovirus-host interactions among Darwin’s finches

Hill, Jason; Lillie, Mette; Pettersson, Mats; Rubin, Carl-Johan et al.

Part of Nature Communications, 2022

• DOI for Spatiotemporal variations in retrovirus-host interactions among Darwin’s finches
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Heterochiasmy and the establishment of gsdf as a novel sex determining gene in Atlantic halibut

Edvardsen, Rolf Brudvik; Wallerman, Ola; Furmanek, Tomasz; Kleppe, Lene et al.

Part of PLOS Genetics, 2022

• DOI for Heterochiasmy and the establishment of gsdf as a novel sex determining gene in Atlantic halibut
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The nedd-8 activating enzyme gene underlies genetic resistance to infectious pancreatic necrosis virus in Atlantic salmon

Pavelin, Jon; Jin, Ye Hwa; Gratacap, Remi L.; Taggart, John B. et al.

Part of Genomics, p. 3842-3850, 2021

• DOI for The nedd-8 activating enzyme gene underlies genetic resistance to infectious pancreatic necrosis virus in Atlantic salmon

A multispecies BCO2 beak color polymorphism in the Darwin's finch radiation

Enbody, Erik D.; Sprehn, Charlotte Grace; Abzhanov, Arhat; Bi, Huijuan et al.

Part of Current Biology, p. 5597-56040000000, 2021

• DOI for A multispecies BCO2 beak color polymorphism in the Darwin's finch radiation
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The polarity protein Par3 coordinates positively self-renewal and negatively invasiveness in glioblastoma

Dadras, Mahsa Shahidi; Caja, Laia; Mezheyeuski, Artur; Liu, Sijia et al.

Part of Cell Death and Disease, 2021

• DOI for The polarity protein Par3 coordinates positively self-renewal and negatively invasiveness in glioblastoma
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Ultralow amounts of DNA from long-term archived serum samples produce high-quality methylomes

Wojewodzic, Marcin W.; Leithaug, Magnus; Lauritzen, Marianne; Lyle, Robert et al.

Part of Clinical Epigenetics, 2021

• DOI for Ultralow amounts of DNA from long-term archived serum samples produce high-quality methylomes
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The Human Adenovirus 2 Transcriptome: An Amazing Complexity of Alternatively Spliced mRNAs

Westergren Jakobsson, Amanda; Segerman, Bo; Wallerman, Ola; Bergström Lind, Sara et al.

Part of Journal of Virology, 2021

• DOI for The Human Adenovirus 2 Transcriptome: An Amazing Complexity of Alternatively Spliced mRNAs
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Comparison of anadromous and landlocked Atlantic salmon genomes reveals signatures of parallel and relaxed selection across the Northern Hemisphere

Kjaerner-Semb, Erik; Edvardsen, Rolf B.; Ayllon, Fernando; Vogelsang, Petra et al.

Part of Evolutionary Applications, p. 446-461, 2021

• DOI for Comparison of anadromous and landlocked Atlantic salmon genomes reveals signatures of parallel and relaxed selection across the Northern Hemisphere

Reconstruction of the birth of a male sex chromosome present in Atlantic herring

Rafati, Nima; Chen, Junfeng; Herpin, Amaury; Pettersson, Mats et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 24359-24368, 2020

• DOI for Reconstruction of the birth of a male sex chromosome present in Atlantic herring
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Brain Transcriptomics of Wild and Domestic Rabbits Suggests That Changes in Dopamine Signaling and Ciliary Function Contributed to Evolution of Tameness

Sato, Daiki X.; Rafati, Nima; Ring, Henrik; Younis, Shady et al.

Part of Genome Biology and Evolution, p. 1918-1928, 2020

• DOI for Brain Transcriptomics of Wild and Domestic Rabbits Suggests That Changes in Dopamine Signaling and Ciliary Function Contributed to Evolution of Tameness

Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs

Bianchi, Matteo; Rafati, Nima; Karlsson, Åsa; Murén, Eva et al.

Part of BMC Genomics, 2020

• DOI for Whole-genome genotyping and resequencing reveal the association of a deletion in the complex interferon alpha gene cluster with hypothyroidism in dogs
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Exploring a Pool-seq-only approach for gaining population genomic insights in nonmodel species

Kurland, Sara; Wheat, Christopher W.; Mancera, Maria de la Paz Celorio; Kutschera, Verena E. et al.

Part of Ecology and Evolution, p. 11448-11463, 2019

• DOI for Exploring a Pool-seq-only approach for gaining population genomic insights in nonmodel species
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The horse Y chromosome as an informative marker for tracing sire lines

Felkel, Sabine; Vogl, Claus; Rigler, Doris; Dobretsberger, Viktoria et al.

Part of Scientific Reports, 2019

• DOI for The horse Y chromosome as an informative marker for tracing sire lines
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Identification and validation of genetic variants predictive of gait in standardbred horses

McCoy, Annette M.; Beeson, Samantha K.; Rubin, Carl-Johan; Andersson, Leif et al.

Part of PLOS Genetics, 2019

• DOI for Identification and validation of genetic variants predictive of gait in standardbred horses
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Genetics of adaptation in modern chicken

Qanbari, Saber; Rubin, Carl-Johan; Maqbool, Khurram; Weigend, Steffen et al.

Part of PLOS Genetics, 2019

• DOI for Genetics of adaptation in modern chicken
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Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard

Andrade, Pedro; Pinho, Catarina; Perez i de lanuza, Guillem; Afonso, Sandra et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 5633-5642, 2019

• DOI for Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard

Elevated proportions of deleterious genetic variation in domestic animals and plants

Makino, Takashi; Rubin, Carl-Johan; Carneiro, Miguel; Axelsson, Erik et al.

Part of Genome Biology and Evolution, p. 276-290, 2018

• DOI for Elevated proportions of deleterious genetic variation in domestic animals and plants
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A genomic map of clinal variation across the European rabbit hybrid zone

Rafati, Nima; Blanco-Aguiar, Jose A.; Rubin, Carl-Johan; Sayyab, Shumaila et al.

Part of Molecular Ecology, p. 1457-1478, 2018

• DOI for A genomic map of clinal variation across the European rabbit hybrid zone

Analysis of porcine body size variation using re-sequencing data of miniature and large pigs

Reimer, C.; Rubin, Carl-Johan; Sharifi, A. R.; Ha, N. -T et al.

Part of BMC Genomics, 2018

• DOI for Analysis of porcine body size variation using re-sequencing data of miniature and large pigs
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Whole-genome comparison of endogenous retrovirus segregation across wild and domestic host species populations

Rivas-Carrillo, Salvador Daniel; Pettersson, Mats; Rubin, Carl-Johan; Jern, Patric

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 11012-11017, 2018

• DOI for Whole-genome comparison of endogenous retrovirus segregation across wild and domestic host species populations
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Changes in brain architecture are consistent with altered fear processing in domestic rabbits

Brusini, Irene; Carneiro, Miguel; Wang, Chunliang; Rubin, Carl-Johan et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 7380-7385, 2018

• DOI for Changes in brain architecture are consistent with altered fear processing in domestic rabbits

Asian horses deepen the MSY phylogeny

Felkel, S.; Vogl, C.; Rigler, D.; Jagannathan, V. et al.

Part of Animal Genetics, p. 90-93, 2018

• DOI for Asian horses deepen the MSY phylogeny

Dwarfism and Altered Craniofacial Development in Rabbits Is Caused by a 12.1 kb Deletion at the HMGA2 Locus

Carneiro, Miguel; Hu, Dou; Archer, John; Feng, Chungang et al.

Part of Genetics, p. 955-965, 2017

• DOI for Dwarfism and Altered Craniofacial Development in Rabbits Is Caused by a 12.1 kb Deletion at the HMGA2 Locus

Moderate nucleotide diversity in the Atlantic herring is associated with a low mutation rate

Feng, Chungang; Pettersson, Mats; Lamichhaney, Sangeet; Rubin, Carl-Johan et al.

Part of eLIFE, 2017

• DOI for Moderate nucleotide diversity in the Atlantic herring is associated with a low mutation rate
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The evolutionary history of the DMRT3 'Gait keeper' haplotype

Staiger, E. A.; Almén, M. S.; Promerova, M.; Brooks, S. et al.

Part of Animal Genetics, p. 551-559, 2017

• DOI for The evolutionary history of the DMRT3 'Gait keeper' haplotype

Y Chromosome Uncovers the Recent Oriental Origin of Modern Stallions

Wallner, Barbara; Palmieri, Nicola; Vogl, Claus; Rigler, Doris et al.

Part of Current Biology, p. 2029-2035, 2017

• DOI for Y Chromosome Uncovers the Recent Oriental Origin of Modern Stallions

Large Deletions at the SHOX Locus in the Pseudoautosomal Region Are Associated with Skeletal Atavism in Shetland Ponies

Rafati, Nima; Andersson, Lisa S.; Mikko, Sofia; Feng, Chungang et al.

Part of G3, p. 2213-2223, 2016

• DOI for Large Deletions at the SHOX Locus in the Pseudoautosomal Region Are Associated with Skeletal Atavism in Shetland Ponies
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The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing

Martínez Barrio, Álvaro; Lamichhaney, Sangeet; Fan, Guangyi; Rafati, Nima et al.

Part of eLIFE, 2016

• DOI for The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing
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Atlantic salmon populations reveal adaptive divergence of immune related genes - a duplicated genome under selection

Kjaerner-Semb, Erik; Ayllon, Fernando; Furmanek, Tomasz; Wennevik, Vidar et al.

Part of BMC Genomics, 2016

• DOI for Atlantic salmon populations reveal adaptive divergence of immune related genes - a duplicated genome under selection
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Regulatory mutations in TBX3 disrupt asymmetric hair pigmentation underlying Dun camouflage colour in horses

Imsland, Freyja; McGowan, Kelly; Rubin, Carl-Johan; Henegar, Corneliu et al.

Part of Nature Genetics, p. 152-158, 2016

• DOI for Regulatory mutations in TBX3 disrupt asymmetric hair pigmentation underlying Dun camouflage colour in horses

Second generation sequencing of microRNA in Human Bone Cells treated with Parathyroid Hormone or Dexamethasone

Laxman, Navya; Rubin, Carl-Johan; Mallmin, Hans; Nilsson, Olle et al.

Part of Bone, p. 181-188, 2016

• DOI for Second generation sequencing of microRNA in Human Bone Cells treated with Parathyroid Hormone or Dexamethasone

Decreased fracture rate, pharmacogenetics and BMD response in 79 Swedish children with osteogenesis imperfecta types I, III and IV treated with Pamidronate

Lindahl, Katarina; Kindmark, Andreas; Rubin, Carl-Johan; Malmgren, B. et al.

Part of Bone, p. 11-18, 2016

• DOI for Decreased fracture rate, pharmacogenetics and BMD response in 79 Swedish children with osteogenesis imperfecta types I, III and IV treated with Pamidronate

Evolution of Darwin's finches and their beaks revealed by genome sequencing

Lamichhaney, Sangeet; Berglund, Jonas; Almen, Markus Sällman; Maqbool, Khurram et al.

Part of Nature, 2015

• DOI for Evolution of Darwin's finches and their beaks revealed by genome sequencing

A Genomic Duplication is Associated with Ectopic Eomesodermin Expression in the Embryonic Chicken Comb and Two Duplex-comb Phenotypes

Dorshorst, Ben; Harun-Or-Rashid, Mohammad; Bagherpoor, Alireza Jian; Rubin, Carl-Johan et al.

Part of PLOS Genetics, 2015

• DOI for A Genomic Duplication is Associated with Ectopic Eomesodermin Expression in the Embryonic Chicken Comb and Two Duplex-comb Phenotypes
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Genetic epidemiology, prevalence, and genotype-phenotype correlations in the Swedish population with osteogenesis imperfecta

Lindahl, Katarina; Astrom, Eva; Rubin, Carl-Johan; Grigelioniene, Giedre et al.

Part of European Journal of Human Genetics, p. 1042-1050, 2015

• DOI for Genetic epidemiology, prevalence, and genotype-phenotype correlations in the Swedish population with osteogenesis imperfecta

The vgll3 Locus Controls Age at Maturity in Wild and Domesticated Atlantic Salmon (Salmo salar L.) Males

Ayllon, Fernando; Kjaerner-Semb, Erik; Furmanek, Tomasz; Wennevik, Vidar et al.

Part of PLOS Genetics, 2015

• DOI for The vgll3 Locus Controls Age at Maturity in Wild and Domesticated Atlantic Salmon (Salmo salar L.) Males
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Dominant Red Coat Color in Holstein Cattle Is Associated with a Missense Mutation in the Coatomer Protein Complex, Subunit Alpha (COPA) Gene

Dorshorst, Ben; Henegar, Corneliu; Liao, Xiaoping; Almén, Markus Sällman et al.

Part of PLOS ONE, 2015

• DOI for Dominant Red Coat Color in Holstein Cattle Is Associated with a Missense Mutation in the Coatomer Protein Complex, Subunit Alpha (COPA) Gene
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Global miRNA expression and correlation with mRNA levels in primary human bone cells

Laxman, Navya; Rubin, Carl-Johan; Mallmin, Hans; Nilsson, Olle et al.

Part of RNA, p. 1433-1443, 2015

• DOI for Global miRNA expression and correlation with mRNA levels in primary human bone cells
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Candidate genes underlying heritable differences in reproductive seasonality between wild and domestic rabbits

Carneiro, Miguel; Piorno, Vicente; Rubin, Carl-Johan; Alves, Joel M. et al.

Part of Animal Genetics, p. 418-425, 2015

• DOI for Candidate genes underlying heritable differences in reproductive seasonality between wild and domestic rabbits

The role of pleiotropy and linkage in genes affecting a sexual ornament and bone allocation in the chicken

Johnsson, M.; Rubin, Carl-Johan; Hoglund, A.; Sahlqvist, Anna-Stina et al.

Part of Molecular Ecology, p. 2275-2286, 2014

• DOI for The role of pleiotropy and linkage in genes affecting a sexual ornament and bone allocation in the chicken

A cis-Regulatory Mutation of PDSS2 Causes Silky-Feather in Chickens

Feng, Chungang; Gao, Yu; Dorshorst, Ben; Song, Chi et al.

Part of PLOS Genetics, 2014

• DOI for A cis-Regulatory Mutation of PDSS2 Causes Silky-Feather in Chickens
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Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

Carneiro, Miguel; Rubin, Carl-Johan; Di Palma, Federica; Albert, Frank W. et al.

Part of Science, p. 1074-1079, 2014

• DOI for Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

ZBED6 Modulates the Transcription of Myogenic Genes in Mouse Myoblast Cells

Jiang, Lin; Wallerman, Ola; Younis, Shady; Rubin, Carl-Johan et al.

Part of PLOS ONE, 2014

• DOI for ZBED6 Modulates the Transcription of Myogenic Genes in Mouse Myoblast Cells
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Differentiation and Phylogenetic Relationships in Mycobacterium spp with Special Reference to the RNase P RNA Gene rnpB

Herrmann, Björn; Stolt, Pelle; Abdeldaim, Guma; Rubin, Carl-Johan et al.

Part of Current Microbiology, p. 634-639, 2014

• DOI for Differentiation and Phylogenetic Relationships in Mycobacterium spp with Special Reference to the RNase P RNA Gene rnpB

Prehistoric genomes reveal the genetic foundation and cost of horse domestication

Schubert, Mikkel; Jonsson, Hakon; Chang, Dan; Sarkissian, Clio Der et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, 2014

• DOI for Prehistoric genomes reveal the genetic foundation and cost of horse domestication

Allele Dependent Silencing of Collagen Type I Using Small Interfering RNAs Targeting 3'UTR Indels: a Novel Therapeutic Approach in Osteogenesis Imperfecta

Lindahl, Katarina; Kindmark, Andreas; Laxman, Navya; Åström, Eva et al.

Part of International Journal of Medical Sciences, p. 1333-1343, 2013

• DOI for Allele Dependent Silencing of Collagen Type I Using Small Interfering RNAs Targeting 3'UTR Indels: a Novel Therapeutic Approach in Osteogenesis Imperfecta
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Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

Orlando, Ludovic; Ginolhac, Aurelien; Zhang, Guojie; Froese, Duane et al.

Part of Nature, p. 74-+, 2013

• DOI for Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

Heritable genome-wide variation of gene expression and promoter methylation between wild and domesticated chickens

Natt, Daniel; Rubin, Carl-Johan; Wright, Dominic; Johnsson, Martin et al.

Part of BMC Genomics, p. 59, 2012

• DOI for Heritable genome-wide variation of gene expression and promoter methylation between wild and domesticated chickens

Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring

Lamichhaney, Sangeet; Barrio, Alvaro Martinez; Rafati, Nima; Sundström, Görel et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 19345-19350, 2012

• DOI for Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring

Onset of Sexual Maturity in Female Chickens is Genetically Linked to Loci Associated with Fecundity and a Sexual Ornament

Wright, D.; Rubin, Carl-Johan; Schutz, K.; Kerje, Susanne et al.

Part of Reproduction in domestic animals, p. 31-36, 2012

• DOI for Onset of Sexual Maturity in Female Chickens is Genetically Linked to Loci Associated with Fecundity and a Sexual Ornament

The Rose-comb Mutation in Chickens Constitutes a Structural Rearrangement Causing Both Altered Comb Morphology and Defective Sperm Motility

Imsland, Freyja; Feng, Chungang; Boije, Henrik; Bed'hom, Bertrand et al.

Part of PLOS Genetics, 2012

• DOI for The Rose-comb Mutation in Chickens Constitutes a Structural Rearrangement Causing Both Altered Comb Morphology and Defective Sperm Motility
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Strong signatures of selection in the domestic pig genome

Rubin, Carl-Johan; Megens, H. -J; Barrio, Alvaro Martinez; Maqbool, K. et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 19529-19536, 2012

• DOI for Strong signatures of selection in the domestic pig genome

A Sexual Ornament in Chickens Is Affected by Pleiotropic Alleles at HAO1 and BMP2, Selected during Domestication

Johnsson, Martin; Gustafson, Ida; Rubin, Carl-Johan; Sahlqvist, Anna-Stina et al.

Part of PLOS Genetics, 2012

• DOI for A Sexual Ornament in Chickens Is Affected by Pleiotropic Alleles at HAO1 and BMP2, Selected during Domestication
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Genotype-phenotype correlations and pharmacogenetic studies in 140 Swedish families with osteogenesis imperfecta

Lindahl, Katarina; Rubin, Carl-Johan; Astrom, E.; Malmgren, B. et al.

Part of Bone, 2012

• DOI for Genotype-phenotype correlations and pharmacogenetic studies in 140 Swedish families with osteogenesis imperfecta

Mutations in DMRT3 affect locomotion in horses and spinal circuit function in mice

Andersson, Lisa S.; Larhammar, Martin; Memic, Fatima; Wootz, Hanna et al.

Part of Nature, p. 642-646, 2012

• DOI for Mutations in DMRT3 affect locomotion in horses and spinal circuit function in mice

COL1 C-Propeptide Cleavage Site Mutations Cause High Bone Mass Osteogenesis Imperfecta

Lindahl, Katarina; Barnes, Aileen M.; Fratzl-Zelman, Nadja; Whyte, Michael P. et al.

Part of Human Mutation, p. 598-609, 2011

• DOI for COL1 C-Propeptide Cleavage Site Mutations Cause High Bone Mass Osteogenesis Imperfecta

Allele-specific gene silencing in osteogenesis imperfecta

Ljunggren, Östen; Lindahl, Katarina; Rubin, Carl-Johan; Kindmark, Andreas

Part of Endocrine Development, p. 85-90, 2011

• DOI for Allele-specific gene silencing in osteogenesis imperfecta

A Complex Genomic Rearrangement Involving the Endothelin 3 Locus Causes Dermal Hyperpigmentation in the Chicken

Dorshorst, Ben; Molin, Anna-Maja; Rubin, Carl-Johan; Johansson, Anna M. et al.

Part of PLoS Genetics, 2011

• DOI for A Complex Genomic Rearrangement Involving the Endothelin 3 Locus Causes Dermal Hyperpigmentation in the Chicken

Whole genome resequencing reveals loci under selection during chicken domestication

Rubin, Carl-Johan; Zody, Michael C.; Eriksson, Jonas; Meadows, Jennifer et al.

Part of Nature, p. 587-591, 2010

• DOI for Whole genome resequencing reveals loci under selection during chicken domestication

ZBED6: the birth of a new transcription factor in the common ancestor of placental mammals

Andersson, Leif; Andersson, Göran; Hjälm, Göran; Jiang, Lin et al.

Part of Transcription, p. 144-148, 2010

• DOI for ZBED6: the birth of a new transcription factor in the common ancestor of placental mammals

The genetic architecture of domestication in the chicken: effects of pleiotropy and linkage

Wright, Dominic; Rubin, Carl-Johan; Martinez Barrio, Alvaro; Schütz, K. et al.

Part of Molecular Ecology, p. 5140-5156, 2010

• DOI for The genetic architecture of domestication in the chicken: effects of pleiotropy and linkage

Heterozygosity for a coding SNP in COL1A2 confers a lower BMD and an increased stroke risk

Lindahl, Katarina; Rubin, Carl-Johan; Brändström, Helena; Karlsson, Magnus K. et al.

Part of Biochemical and Biophysical Research Communications - BBRC, p. 501-505, 2009

• DOI for Heterozygosity for a coding SNP in COL1A2 confers a lower BMD and an increased stroke risk

Copy number variation in intron 1 of SOX5 causes the Pea-comb phenotype in chickens

Wright, Dominic; Boije, Henrik; Meadows, Jennifer; Bed'hom, Bertrand et al.

Part of PLoS Genetics, 2009

• DOI for Copy number variation in intron 1 of SOX5 causes the Pea-comb phenotype in chickens

Allele dependent silencing of COL1A2 using small interfering RNAs

Lindahl, Katarina; Rubin, Carl-Johan; Kindmark, Andreas; Ljunggren, Östen

Part of International Journal of Medical Sciences, p. 361-365, 2008

Differential gene expression in femoral bone from red junglefowl and domestic chicken, differing for bone phenotypic traits

Rubin, Carl-Johan; Lindberg, Johan; Fitzsimmons, Carolyn; Savolainen, Peter et al.

Part of BMC Genomics, p. 208, 2007

• DOI for Differential gene expression in femoral bone from red junglefowl and domestic chicken, differing for bone phenotypic traits

Quantitative Trait Loci for BMD and Bone Strength in an Intercross Between Domestic and Wildtype Chickens

Rubin, Carl-Johan; Brändström, Helena; Wright, Dominic; Kerje, Susanne et al.

Part of Journal of Bone and Mineral Research, p. 375-384, 2007

• DOI for Quantitative Trait Loci for BMD and Bone Strength in an Intercross Between Domestic and Wildtype Chickens

Phylogenetic relationships and species differentiation of 39 Legionella species by sequence determination of the RNase P RNA gene rnpB

Rubin, Carl-Johan; Thollesson, Mikael; Kirsebom, Leif A; Herrmann, Björn

Part of Int J Syst Evol Microbiol, p. 2039-49, 2005

Comparison of a duplex quantitative real-time PCR assay and the COBAS Amplicor CMV Monitor test for detection of cytomegalovirus

Herrmann, Björn; Larsson, Viviana Cavaglia; Rubin, Carl-Johan; Sund, Fredrik et al.

Part of Journal of Clinical Microbiology, p. 1909-14, 2004

• DOI for Comparison of a duplex quantitative real-time PCR assay and the COBAS Amplicor CMV Monitor test for detection of cytomegalovirus

Characterization of ompA genotypes by sequence analysis of DNA from all detected cases of Chlamydia trachomatis infections during 1 year of contact tracing in a Swedish County.

Lysén, Maria; Osterlund, Anders; Rubin, Carl-Johan; Persson, Tina et al.

Part of J Clin Microbiol, p. 1641-7, 2004

The role of ZBED6 in transcriptional regulation studied by transcriptome  analysis after RNAi in mouse myoblasts

Jiang, Lin; Rubin, Carl-Johan; Gilbert, Elizabeth; Sundström, Elisabeth et al.

Functional Genomics of Bone Metabolism: Novel Candidate Genes Identified by Studies in Chicken Models

Rubin, Carl-Johan

2008

• Download full text (pdf) of Functional Genomics of Bone Metabolism: Novel Candidate Genes Identified by Studies in Chicken Models

Allele-Specific Gene Silencing in Osteogenesis Imperfecta

Ljunggren, Östen; Lindahl, Katarina; Rubin, Carl-Johan; Kindmark, Andreas

Part of Cartilage and Bone Development and Its Disorders, p. 85-90, 2011