Bergquist Group

Central and peripheral kynurenine pathway metabolites in COVID-19: Implications for neurological and immunological responses

Li, Xueqi; Edén, Arvid; Malwade, Susmita; Cunningham, Janet L. et al.

Part of Brain, behavior, and immunity, p. 163-176, 2025

• DOI for Central and peripheral kynurenine pathway metabolites in COVID-19: Implications for neurological and immunological responses

Comprehensive quantification of C4 to C26 free fatty acids using a supercritical fluid chromatography-mass spectrometry method in pharmaceutical-grade egg yolk powders intended for total parenteral nutrition use

Retrato, Mark Dennis Chico; Nguyen, Anh Vu; Ubhayasekera, S. J. Kumari A.; Bergquist, Jonas

Part of Analytical and Bioanalytical Chemistry, 2025

• DOI for Comprehensive quantification of C4 to C26 free fatty acids using a supercritical fluid chromatography-mass spectrometry method in pharmaceutical-grade egg yolk powders intended for total parenteral nutrition use
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A multi-tissue longitudinal proteomics study to evaluate the suitability of post-mortem samples for pathophysiological research

Beusch, Christian; Braesch-Andersen, Ken; Felldin, Ulrika; Sabatier, Pierre et al.

Part of Communications Biology, 2025

• DOI for A multi-tissue longitudinal proteomics study to evaluate the suitability of post-mortem samples for pathophysiological research
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Pharmacokinetics and Alterations in Glucose and Insulin Levels After a Single Dose of Canagliflozin in Healthy Icelandic Horses

Michanek, Peter; Bröjer, Johan; Lilliehöök, Inger; Fjordbakk, Cathrine T et al.

Part of Journal of Veterinary Pharmacology and Therapeutics, p. 41-49, 2025

• DOI for Pharmacokinetics and Alterations in Glucose and Insulin Levels After a Single Dose of Canagliflozin in Healthy Icelandic Horses
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Targeted analysis of seven selected tryptophan-melatonin metabolites: Simultaneous quantification of plasma analytes using fast and sensitive UHPLC-MS/MS

Kaleta, Michal; Kolitha, Bhagya S.; Novak, Ondrej; Rad, Farshid Mashayekhy et al.

Part of Journal of chromatography. B, 2025

• DOI for Targeted analysis of seven selected tryptophan-melatonin metabolites: Simultaneous quantification of plasma analytes using fast and sensitive UHPLC-MS/MS
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EACH Erasmus Mundus programme: advancing excellence in analytical chemistry education and industry impact

Rebane, Riin; Teearu, Anu; Helm, Irja; Bobacka, Johan et al.

Part of Analytical and Bioanalytical Chemistry, p. 1035-1047, 2025

• DOI for EACH Erasmus Mundus programme: advancing excellence in analytical chemistry education and industry impact
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A metabolomics perspective on 2 years of high-intensity training in horses

Johansson, L.; Ringmark, S.; Bergquist, Jonas; Skiöldebrand, E. et al.

Part of Scientific Reports, 2024

• DOI for A metabolomics perspective on 2 years of high-intensity training in horses
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Toward ovarian cancer screening with protein biomarkers using dried, self-sampled cervico-vaginal fluid

Hedlund Lindberg, Julia; Widgren, Anna; Ivansson, Emma; Gustavsson, Inger M. et al.

Part of iScience, 2024

• DOI for Toward ovarian cancer screening with protein biomarkers using dried, self-sampled cervico-vaginal fluid
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Analysis of tryptophan metabolites and related compounds in human and murine tissue: development and validation of a quantitative and semi-quantitative method using high resolution mass spectrometry

Abujrais, Sandy; Ubhayasekera, S.J. Kumari A.; Bergquist, Jonas

Part of Analytical Methods, p. 1074-1082, 2024

• DOI for Analysis of tryptophan metabolites and related compounds in human and murine tissue: development and validation of a quantitative and semi-quantitative method using high resolution mass spectrometry
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Hearing loss and its association with the proteome of perilymph, cerebrospinal fluid, and tumor tissue in patients with vestibular schwannoma

Edvardsson Rasmussen, Jesper; Li, Peng; Laurell, Göran; Bergquist, Jonas et al.

Part of Scientific Reports, 2024

• DOI for Hearing loss and its association with the proteome of perilymph, cerebrospinal fluid, and tumor tissue in patients with vestibular schwannoma
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Environmental contaminants, sex hormones and SHBG in an elderly population

Kushnir, Mark M.; Salihovic, Samira; Bergquist, Jonas; Lind, P. Monica et al.

Part of Environmental Research, 2024

• DOI for Environmental contaminants, sex hormones and SHBG in an elderly population

Allopregnanolone and progesterone in relation to a single electroconvulsive therapy seizure and subsequent clinical outcome: an observational cohort study

Thörnblom, Elin; Cunningham, Janet L.; Gingnell, Malin; Landén, Mikael et al.

Part of BMC Psychiatry, 2024

• DOI for Allopregnanolone and progesterone in relation to a single electroconvulsive therapy seizure and subsequent clinical outcome: an observational cohort study
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A proteomics perspective on 2 years of high-intensity training in horses: a pilot study

Johansson, L.; Ringmark, S.; Bergquist, Jonas; Skiöldebrand, E. et al.

Part of Scientific Reports, 2024

• DOI for A proteomics perspective on 2 years of high-intensity training in horses: a pilot study
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Proteomic Profiles Associated With Postsurgical Progression in Nonfunctioning Pituitary Adenomas

Hallen, Tobias; Johannsson, Gudmundur; Thorsell, Annika; Olsson, Daniel S. et al.

Part of Journal of Clinical Endocrinology and Metabolism, p. 1485-1493, 2024

• DOI for Proteomic Profiles Associated With Postsurgical Progression in Nonfunctioning Pituitary Adenomas
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Untargeted metabolomics and quantitative analysis of tryptophan metabolites in myalgic encephalomyelitis patients and healthy volunteers: a comparative study using high resolution mass spectrometry

Abujrais, Sandy; Vallianatou, Theodosia; Bergquist, Jonas

2024

• DOI for Untargeted metabolomics and quantitative analysis of tryptophan metabolites in myalgic encephalomyelitis patients and healthy volunteers: a comparative study using high resolution mass spectrometry
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Effects of early treatment with nonsteroidal anti-inflammatory drugs (NSAIDs) on the bronchoalveolar lavage proteome and oxylipids during bovine respiratory syncytial virus (BRSV) infection

Hägglund, Sara; Laloy, Eve; Alvarez, Ignacio; Guo, Yongzhi et al.

Part of PLOS ONE, 2024

• DOI for Effects of early treatment with nonsteroidal anti-inflammatory drugs (NSAIDs) on the bronchoalveolar lavage proteome and oxylipids during bovine respiratory syncytial virus (BRSV) infection
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Proteomics Panel of BAL Fluid Associated with Ventilator-induced Lung Injury

Wen, Ya; Zhang, Xiang; Cacciani, Nicola; Hedström, Yvette et al.

Part of American Journal of Respiratory Cell and Molecular Biology, p. 12-15, 2024

• DOI for Proteomics Panel of BAL Fluid Associated with Ventilator-induced Lung Injury

Multi-omics analysis of aggregative multicellularity

Edelbroek, Bart; Orzechowski Westholm, Jakub; Bergquist, Jonas; Söderbom, Fredrik

Part of iScience, 2024

• DOI for Multi-omics analysis of aggregative multicellularity
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Ruxolitinib: A new hope for ventilator-induced diaphragm dysfunction

Addinsall, Alex B.; Cacciani, Nicola; Moruzzi, Noah; Akkad, Hazem et al.

Part of Acta Physiologica, 2024

• DOI for Ruxolitinib: A new hope for ventilator-induced diaphragm dysfunction
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SARS-CoV-2 and HSV-1 Induce Amyloid Aggregation in Human CSF Resulting in Drastic Soluble Protein Depletion

Christ, Wanda; Kapell, Sebastian; Sobkowiak, Michal J.; Mermelekas, Georgios et al.

Part of ACS Chemical Neuroscience, p. 4095-4104, 2024

• DOI for SARS-CoV-2 and HSV-1 Induce Amyloid Aggregation in Human CSF Resulting in Drastic Soluble Protein Depletion

Proteomic and Lipidomic Profiling of Calves Experimentally Co-Infected with Influenza D Virus and Mycoplasma bovis: Insights into the Host-Pathogen Interactions

Alvarez, Ignacio; Ducatez, Mariette; Guo, Yongzhi; Lion, Adrien et al.

Part of Viruses, 2024

• DOI for Proteomic and Lipidomic Profiling of Calves Experimentally Co-Infected with Influenza D Virus and Mycoplasma bovis: Insights into the Host-Pathogen Interactions
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Elevated Plasma Levels of Arginines During Labor Among Women with Spontaneous Preterm Birth: A Prospective Cohort Study

Akhter, Tansim; Hedeland, Mikael; Bergquist, Jonas; Ubhayasekera, Kumari et al.

Part of American Journal of Reproductive Immunology, 2024

• DOI for Elevated Plasma Levels of Arginines During Labor Among Women with Spontaneous Preterm Birth: A Prospective Cohort Study
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Elevated plasma level of arginine and its metabolites at labor among women with preeclampsia: A prospective cohort study

Akhter, Tansim; Hedeland, Mikael; Bergquist, Jonas; Larsson, Anders et al.

Part of American Journal of Hypertension, p. 184-191, 2024

• DOI for Elevated plasma level of arginine and its metabolites at labor among women with preeclampsia: A prospective cohort study
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Text Mining and Computational Chemistry Reveal Trends in Applications of Laser Desorption/Ionization Techniques to Small Molecules

Bergman, Nina P.; Bergquist, Jonas; Hedeland, Mikael; Palmblad, Magnus

Part of Journal of the American Society for Mass Spectrometry, p. 2507-2515, 2024

• DOI for Text Mining and Computational Chemistry Reveal Trends in Applications of Laser Desorption/Ionization Techniques to Small Molecules
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Deciphering Proteomic Expression in Inflammatory Disorders: A Mass Spectrometry Exploration Comparing Infectious, Noninfectious, and Traumatic Brain Injuries in Human Cerebrospinal Fluid

Dyhrfort, Philip; Lindblad, Caroline; Widgren, Anna; Virhammar, Johan et al.

Part of Neurotrauma Reports, p. 857-873, 2024

• DOI for Deciphering Proteomic Expression in Inflammatory Disorders: A Mass Spectrometry Exploration Comparing Infectious, Noninfectious, and Traumatic Brain Injuries in Human Cerebrospinal Fluid

Silencing DTX3L Inhibits the Progression of Cervical Carcinoma by Regulating PI3K/AKT/mTOR Signaling Pathway

Hu, Wei; Hu, Yaorui; Pei, Yao; Li, Rongrong et al.

Part of International Journal of Molecular Sciences, 2023

• DOI for Silencing DTX3L Inhibits the Progression of Cervical Carcinoma by Regulating PI3K/AKT/mTOR Signaling Pathway
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Capillary electrophoresis - A bibliometric analysis

Palmblad, Magnus; van Eck, Nees Jan; Bergquist, Jonas

Part of TrAC. Trends in analytical chemistry, 2023

• DOI for Capillary electrophoresis - A bibliometric analysis
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Text mining and computational chemistry reveal trends in applications and applicability of capillary electrophoresis

Palmblad, Magnus; Vleugels, Reinier; Bergquist, Jonas

Part of TrAC. Trends in analytical chemistry, 2023

• DOI for Text mining and computational chemistry reveal trends in applications and applicability of capillary electrophoresis
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A fast ultra performance supercritical fluid chromatography-tandem mass spectrometric method for profiling of targeted phytosterols

Jayantha, J. B. S. K.; Rad, Farshid Mashayekhy; Vidanarachchi, J. K.; Bergquist, Jonas et al.

Part of Journal of chromatography. B, 2023

• DOI for A fast ultra performance supercritical fluid chromatography-tandem mass spectrometric method for profiling of targeted phytosterols
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Temporal pathway analysis of cerebrospinal fluid proteome in herpes simplex encephalitis

Nääs, Anja; Li, Peng; Ahlm, Clas; Aurelius, Elisabeth et al.

Part of Infectious Diseases, p. 694-705, 2023

• DOI for Temporal pathway analysis of cerebrospinal fluid proteome in herpes simplex encephalitis

Comparison of nutritional and trace element concentrations in some Sri Lankan traditional rice varieties

Kodikara, Chamali; Vidanarachchi, Janak K.; Nissanka, Sarath P.; Bergquist, Jonas et al.

Part of International journal of food science & technology, p. 5168-5182, 2023

• DOI for Comparison of nutritional and trace element concentrations in some Sri Lankan traditional rice varieties
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The Combination of Quantitative Proteomics and Systems Genetics Analysis Reveals that PTN Is Associated with Sleep-Loss-Induced Cognitive Impairment

Zhou, Yutong; Li, Hui; Liu, Xiaoya; Chi, Xiaodong et al.

Part of Journal of Proteome Research, p. 2936-2949, 2023

• DOI for The Combination of Quantitative Proteomics and Systems Genetics Analysis Reveals that PTN Is Associated with Sleep-Loss-Induced Cognitive Impairment

Research and education in analytical chemistry: Industrial and academic perspectives from a survey conducted in Sweden

Bergquist, Jonas; Emmer, Åsa; Farbrot, Anne; Turner, Charlotta

Part of Analytical and Bioanalytical Chemistry, p. 2151-2161, 2023

• DOI for Research and education in analytical chemistry: Industrial and academic perspectives from a survey conducted in Sweden
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LC-MS/MS Analysis of Cyanotoxins in Bivalve Mollusks: Method Development, Validation and First Evidence of Occurrence of Nodularin in Mussels (Mytilus edulis) and Oysters (Magallana gigas) from the West Coast of Sweden

Amortegui, Julio Cesar Espana; Pekar, Heidi; Retrato, Mark Dennis Chico; Persson, Malin et al.

Part of Toxins, 2023

• DOI for LC-MS/MS Analysis of Cyanotoxins in Bivalve Mollusks: Method Development, Validation and First Evidence of Occurrence of Nodularin in Mussels (Mytilus edulis) and Oysters (Magallana gigas) from the West Coast of Sweden
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Simultaneous determination of 22 fatty acids in total parenteral nutrition (TPN) components by gas chromatography-mass spectrometry (GC-MS)

Retrato, Mark Dennis Chico; Qiu, Siyuan; Lundquist, Anna; Muratovic, Aida Zuberovic et al.

Part of Analytical Methods, p. 2480-2489, 2023

• DOI for Simultaneous determination of 22 fatty acids in total parenteral nutrition (TPN) components by gas chromatography-mass spectrometry (GC-MS)
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Hyperandrogenic Symptoms Are a Persistent Suffering in Midlife Women with PCOS; a Prospective Cohort Study in Sweden

Persson, Sofia; Ubhayasekera, Kumari; Bergquist, Jonas; Turkmen, Sahruh et al.

Part of Biomedicines, 2023

• DOI for Hyperandrogenic Symptoms Are a Persistent Suffering in Midlife Women with PCOS; a Prospective Cohort Study in Sweden
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The association between maternal body mass index and serial plasma oxytocin levels during labor

Isgren, Anna Ramo; Carlhall, Sara; Retrato, Mark Dennis Chico; Kodikara, Chamali et al.

Part of PLOS ONE, 2023

• DOI for The association between maternal body mass index and serial plasma oxytocin levels during labor
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Plasma levels of arginines at term pregnancy in relation to mode of onset of labor and mode of childbirth

Akhter, Tansim; Hedeland, Mikael; Bergquist, Jonas; Ubhayasekera, Kumari et al.

Part of American Journal of Reproductive Immunology, 2023

• DOI for Plasma levels of arginines at term pregnancy in relation to mode of onset of labor and mode of childbirth
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Myalgic encephalomyelitis/chronic fatigue syndrome and fibromyalgia are indistinguishable by their cerebrospinal fluid proteomes

Schutzer, Steven E.; Liu, Tao; Tsai, Chia-Feng; Petyuk, Vladislav A. et al.

Part of Annals of Medicine, 2023

• DOI for Myalgic encephalomyelitis/chronic fatigue syndrome and fibromyalgia are indistinguishable by their cerebrospinal fluid proteomes
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Identification of cytoskeletal proteins as binding partners of Bri2 BRICHOS domain

Shimozawa, Makoto; Tigro, Helene; Biverstal, Henrik; Shevchenko, Ganna et al.

Part of Molecular and Cellular Neuroscience, 2023

• DOI for Identification of cytoskeletal proteins as binding partners of Bri2 BRICHOS domain
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Increased CSF-decorin predicts brain pathological changes driven by Alzheimer's A beta amyloidosis

Jiang, Richeng; Smailovic, Una; Haytural, Hazal; Tijms, Betty M. et al.

Part of Acta neuropathologica communications, 2022

• DOI for Increased CSF-decorin predicts brain pathological changes driven by Alzheimer's A beta amyloidosis
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Acetylation of Checkpoint suppressor 1 enhances its stability and promotes the progression of triple-negative breast cancer

Xu, Zhaowei; Liu, Shuyan; Feng, Chun; Xu, Fuyi et al.

Part of Cell Death Discovery, 2022

• DOI for Acetylation of Checkpoint suppressor 1 enhances its stability and promotes the progression of triple-negative breast cancer
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When a 17-Year-Old Girl Is Diagnosed with Myalgic Encephalomyelitis: A Case Study from the Swedish Health Care System—A Parent Perspective

Horwitz, Eva Bojner; Axelsson, Jonas; Polo, Olli; Widebert, Leif et al.

Part of Case Reports in Clinical Medicine, p. 280-296, 2022

• DOI for When a 17-Year-Old Girl Is Diagnosed with Myalgic Encephalomyelitis: A Case Study from the Swedish Health Care System—A Parent Perspective
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Myalgic Encephalomyelitis/Chronic Fatigue Syndrome and fibromyalgia are indistinguishable by their cerebrospinal fluid proteomes

Schutzer, Steven E.; Liu, Tao; Tsai, Chia-Feng; Petyuk, Vladislav A. et al.

Part of bioRxiv Neurology, 2022

• DOI for Myalgic Encephalomyelitis/Chronic Fatigue Syndrome and fibromyalgia are indistinguishable by their cerebrospinal fluid proteomes

The potential use of supercharging agents for improved mass spectrometric analysis of monoclonal antibodies and antibody-drug conjugates

Källsten, Malin; Visanu, Diana; Pijnappel, Matthijs; Lehmann, Fredrik et al.

Part of joural of the american society for mass spectronomy, 2022

• DOI for The potential use of supercharging agents for improved mass spectrometric analysis of monoclonal antibodies and antibody-drug conjugates

Membrane Sampling Separates Naphthenic Acids from Biogenic Dissolved Organic Matter for Direct Analysis by Mass Spectrometry

Duncan, Kyle D.; Hawkes, Jeffrey A.; Berg, Mykelti; Clarijs, Bas et al.

Part of Environmental Science and Technology, p. 3096-3105, 2022

• DOI for Membrane Sampling Separates Naphthenic Acids from Biogenic Dissolved Organic Matter for Direct Analysis by Mass Spectrometry

Reduced high-intensity training distance in growing horses had no effect on IGF-1 concentrations, but training onset interrupted time-dependent IGF-1 decline

Johansson, L.; Ringmark, S.; Skioldebrand, E.; Bergquist, Jonas et al.

Part of Comparative Exercise Physiology, p. 201-209, 2022

• DOI for Reduced high-intensity training distance in growing horses had no effect on IGF-1 concentrations, but training onset interrupted time-dependent IGF-1 decline

Perspective: Drawing on Findings From Critical Illness to Explain Myalgic Encephalomyelitis/Chronic Fatigue Syndrome

Stanculescu, Dominic; Bergquist, Jonas

Part of Frontiers in Medicine, 2022

• DOI for Perspective: Drawing on Findings From Critical Illness to Explain Myalgic Encephalomyelitis/Chronic Fatigue Syndrome
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Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid

Liu, Jian; Yang, Chunhua; Zhang, Huayu; Hu, Wei et al.

Part of PROTEOMICS - Clinical Applications, 2022

• DOI for Quantitative proteomics approach reveals novel biomarkers and pathological mechanism of keloid
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Semantic Annotation of Experimental Methods in Analytical Chemistry

Palmblad, Magnus; Asein, Enahoro; Bergman, Nina; Ivanova, Arina et al.

Part of Analytical Chemistry, p. 15464-15471, 2022

• DOI for Semantic Annotation of Experimental Methods in Analytical Chemistry
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