Johan Reimegård

Origin, structure, and composition of the spider major ampullate silk fiber revealed by genomics, proteomics, and single-cell and spatial transcriptomics

Sonavane, Sumalata; Hassan, Sameer; Chatterjee, Urmimala; Soler, Lucile et al.

Ingår i Science Advances, 2024

• DOI för Origin, structure, and composition of the spider major ampullate silk fiber revealed by genomics, proteomics, and single-cell and spatial transcriptomics
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Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network

Hunt, George; Vaid, Roshan; Pirogov, Sergei; Pfab, Alexander et al.

Ingår i Genome Biology, 2024

• DOI för Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network
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Genetic atlas of hygro-and thermosensory cells in the vinegar fly Drosophila melanogaster

Corthals, Kristina; Andersson, Vilma; Churcher, Allison; Reimegård, Johan et al.

Ingår i Scientific Reports, 2023

• DOI för Genetic atlas of hygro-and thermosensory cells in the vinegar fly Drosophila melanogaster
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Nuclear-specific gene expression in heterokaryons of the filamentous ascomycete Neurospora tetrasperma

Meunier, Cecile; Darolti, Iulia; Reimegård, Johan; Mank, Judith E. et al.

Ingår i Proceedings of the Royal Society of London. Biological Sciences, 2022

• DOI för Nuclear-specific gene expression in heterokaryons of the filamentous ascomycete Neurospora tetrasperma
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Abundantly expressed class of noncoding RNAs conserved through the multicellular evolution of dictyostelid social amoebas

Kjellin, Jonas; Avesson, Lotta; Reimegård, Johan; Liao, Zhen et al.

Ingår i Genome Research, s. 436-447, 2021

• DOI för Abundantly expressed class of noncoding RNAs conserved through the multicellular evolution of dictyostelid social amoebas
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Origin, structure, and composition of the spider major ampullate silk fiber revealed by genomics, proteomics, and single-cell and spatial transcriptomics

Sonavane, Sumalata; Hassan, Sameer; Chatterjee, Urmimala; Soler, Lucile et al.

Ingår i Science Advances, 2024

• DOI för Origin, structure, and composition of the spider major ampullate silk fiber revealed by genomics, proteomics, and single-cell and spatial transcriptomics
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Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network

Hunt, George; Vaid, Roshan; Pirogov, Sergei; Pfab, Alexander et al.

Ingår i Genome Biology, 2024

• DOI för Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network
• Ladda ner fulltext (pdf) av Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network

Genetic atlas of hygro-and thermosensory cells in the vinegar fly Drosophila melanogaster

Corthals, Kristina; Andersson, Vilma; Churcher, Allison; Reimegård, Johan et al.

Ingår i Scientific Reports, 2023

• DOI för Genetic atlas of hygro-and thermosensory cells in the vinegar fly Drosophila melanogaster
• Ladda ner fulltext (pdf) av Genetic atlas of hygro-and thermosensory cells in the vinegar fly Drosophila melanogaster

Nuclear-specific gene expression in heterokaryons of the filamentous ascomycete Neurospora tetrasperma

Meunier, Cecile; Darolti, Iulia; Reimegård, Johan; Mank, Judith E. et al.

Ingår i Proceedings of the Royal Society of London. Biological Sciences, 2022

• DOI för Nuclear-specific gene expression in heterokaryons of the filamentous ascomycete Neurospora tetrasperma
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Abundantly expressed class of noncoding RNAs conserved through the multicellular evolution of dictyostelid social amoebas

Kjellin, Jonas; Avesson, Lotta; Reimegård, Johan; Liao, Zhen et al.

Ingår i Genome Research, s. 436-447, 2021

• DOI för Abundantly expressed class of noncoding RNAs conserved through the multicellular evolution of dictyostelid social amoebas
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A combined approach for single-cell mRNA and intracellular protein expression analysis

Reimegård, Johan; Tarbier, Marcel; Danielsson, Marcus; Schuster, Jens et al.

Ingår i Communications Biology, 2021

• DOI för A combined approach for single-cell mRNA and intracellular protein expression analysis
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Comparative analysis of genome-wide DNA methylation in Neurospora

Hosseini, Sara; Meunier, Cécile; Nguyen, Diem; Reimegård, Johan et al.

Ingår i Epigenetics, s. 972-987, 2020

• DOI för Comparative analysis of genome-wide DNA methylation in Neurospora
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A Spatiotemporal Organ-Wide Gene Expression and Cell Atlas of the Developing Human Heart

Asp, Michaela; Giacomello, Stefania; Larsson, Ludvig; Wu, Chenglin et al.

Ingår i Cell, s. 1647-+, 2019

• DOI för A Spatiotemporal Organ-Wide Gene Expression and Cell Atlas of the Developing Human Heart

New insights into the human heart development using a combined spatial and single-cell transcriptomics approach

Giacomello, Stefania; Asp, Michaela; Wärdell, Eva; Reimegård, Johan et al.

Ingår i Human Genomics, s. 50-51, 2018

• DOI för New insights into the human heart development using a combined spatial and single-cell transcriptomics approach
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Identification of endoribonuclease specific cleavage positions reveals novel targets of RNase III in Streptococcus pyogenes

Le Rhun, Anais; Lecrivain, Anne-Laure; Reimegård, Johan; Proux-Wera, Estelle et al.

Ingår i Nucleic Acids Research, s. 2329-2340, 2017

• DOI för Identification of endoribonuclease specific cleavage positions reveals novel targets of RNase III in Streptococcus pyogenes
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Spatially resolved transcriptome profiling in model plant species

Giacomello, Stefania; Salmen, Fredrik; Terebieniec, Barbara K.; Vickovic, Sanja et al.

Ingår i NATURE PLANTS, 2017

• DOI för Spatially resolved transcriptome profiling in model plant species

Genomic analysis reveals major determinants of cis-regulatory variation in Capsella grandiflora

Steige, Kim A.; Laenen, Benjamin; Reimegård, Johan; Scofield, Douglas G. et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 1087-1092, 2017

• DOI för Genomic analysis reveals major determinants of cis-regulatory variation in Capsella grandiflora

RNA sequencing uncovers antisense RNAs and novel small RNAs in Streptococcus pyogenes

Le Rhun, Anais; Beer, Yan Yan; Reimegård, Johan; Chylinski, Krzysztof et al.

Ingår i RNA Biology, s. 177-195, 2016

• DOI för RNA sequencing uncovers antisense RNAs and novel small RNAs in Streptococcus pyogenes
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Cis-Regulatory Changes Associated with a Recent Mating System Shift and Floral Adaptation in Capsella

Steige, Kim A.; Reimegård, Johan; Koenig, Daniel; Scofield, Douglas G. et al.

Ingår i Molecular biology and evolution, s. 2501-2514, 2015

• DOI för Cis-Regulatory Changes Associated with a Recent Mating System Shift and Floral Adaptation in Capsella
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A method to map changes in bacterial surface composition induced by regulatory RNAs in Escherichia coli and Staphylococcus aureus

Hammann, Philippe; Parmentier, Delphine; Cerciat, Marie; Reimegård, Johan et al.

Ingår i Biochimie, s. 175-179, 2014

• DOI för A method to map changes in bacterial surface composition induced by regulatory RNAs in Escherichia coli and Staphylococcus aureus
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Massive functional mapping of a 5'-UTR by saturation mutagenesis, phenotypic sorting and deep sequencing

Holmqvist, Erik; Reimegard, Johan; Wagner, Gerhart E. H.

Ingår i Nucleic Acids Research, 2013

• DOI för Massive functional mapping of a 5'-UTR by saturation mutagenesis, phenotypic sorting and deep sequencing
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A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp

Holmqvist, Erik; Unoson, Cecilia; Reimegård, Johan; Wagner, Gerhart E. H.

Ingår i Molecular Microbiology, s. 414-427, 2012

• DOI för A mixed double negative feedback loop between the sRNA MicF and the global regulator Lrp

Making Sense of Antisense

Reimegård, Johan

2010

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AntisenseRNA: fast, specific target prediction for bacterial sRNAs through models of interaction and evolutionary conservation

Reimegård, Johan; Ardell, David; Wagner, Gerhart Eduard Heinrich

The sRNA MicF targets its own regulator Lrp and promotes a positive feedback loop

Holmqvist, Erik; Unoson, Cecilia; Reimegård, Johan; Wagner, Gerhart E. H.