Silke Langenheder
Professor , Head of Program for Limnology at Department of Ecology and Genetics; Limnology
- Telephone:
- +46 18 471 27 10
- Mobile phone:
- +46 73 820 18 54
- E-mail:
- silke.langenheder@ebc.uu.se
- Visiting address:
- Evolutionsbiologiskt centrum (EBC)
Norbyvägen 18 D
752 36 Uppsala - Postal address:
- Norbyvägen 18 D
752 36 Uppsala
Download contact information for Silke Langenheder at Department of Ecology and Genetics; Limnology
Short presentation
I am a professor in Limnology at Uppsala University and work on a range of projects in the field of community and ecosystem ecology. I am also the Coordinator of the SITES AquaNet mesocosm infrastructure.
Keywords
- microbial ecology
- aquatic ecosystem ecology
- community ecology
Research
The overall aim with my research is to gain a better understanding of the mechanisms that regulate diversity and functioning of microbial communities in freshwater systems, in particular in response to environmental change and disturbances.
My group addresses the following fundamental ecological questions:
(1) What determines the relationship between diversity and ecosystem functioning?
(2) What are the mechanisms regulating diversity across space and time?
(3) How do environmental change and disturbances influence biodiversity and ecosystem functioning?
To address the above questions we use primarily experimental studies using both lab-scale microcosms as well as field-based mesocosms.
Current projects focus on how the relative importance of different assembly mechanisms that structure bacterial metacommunities (selection, drift, and dispersal) is influenced by different global environmental change drivers. We are also investigating how different feeding modes of flagellates (heterotrophic vs mixotrophic) respond to environmental change related to eutrophication and browning of lakes.
I also work with coordinated mesocosm experiments using the SITES AquaNet infrastructure. Recent experiments focused, for example, on effects of different run-off and salinity disturbance regimes on the functioning and composition of plankton communities.
Group members:
Berenike Bick (PhD student)
Marina Ivankovic (Post-doc)
Hareena Sidhu (MSc student)
Konstantinos Kleidonaris (MSc student)

Publications
Recent publications
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Part of Limnology and Oceanography Letters, 2026
- DOI for The Zooplankton International Geospatial dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research
- Download full text (pdf) of The Zooplankton International Geospatial dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research
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Human contributions to global soundscapes are less predictable than the acoustic rhythms of wildlife
Part of Nature Ecology & Evolution, p. 1585-1598, 2025
- DOI for Human contributions to global soundscapes are less predictable than the acoustic rhythms of wildlife
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Linking nutrient availability and community size to stochasticity in microbial community assembly
Part of FEMS Microbiology Ecology, 2025
- DOI for Linking nutrient availability and community size to stochasticity in microbial community assembly
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Part of Limnology and Oceanography, 2025
- DOI for Nutrient pulse scenarios drive contrasting patterns in the functional stability of freshwater phytoplankton
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Trophic strategies of freshwater nanoflagellates under variable run-off scenarios
Part of Limnology and Oceanography, 2025
- DOI for Trophic strategies of freshwater nanoflagellates under variable run-off scenarios
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All publications
Articles in journal
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Human contributions to global soundscapes are less predictable than the acoustic rhythms of wildlife
Part of Nature Ecology & Evolution, p. 1585-1598, 2025
- DOI for Human contributions to global soundscapes are less predictable than the acoustic rhythms of wildlife
- Download full text (pdf) of Human contributions to global soundscapes are less predictable than the acoustic rhythms of wildlife
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Linking nutrient availability and community size to stochasticity in microbial community assembly
Part of FEMS Microbiology Ecology, 2025
- DOI for Linking nutrient availability and community size to stochasticity in microbial community assembly
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Part of Limnology and Oceanography, 2025
- DOI for Nutrient pulse scenarios drive contrasting patterns in the functional stability of freshwater phytoplankton
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Trophic strategies of freshwater nanoflagellates under variable run-off scenarios
Part of Limnology and Oceanography, 2025
- DOI for Trophic strategies of freshwater nanoflagellates under variable run-off scenarios
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Part of Freshwater Biology, 2025
- DOI for Effects of Changing Snow and Ice Cover Conditions on Phytoplankton Chlorophyll-a and Community Composition in a Mesotrophic Lake
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Part of Oikos, 2025
- DOI for Addressing grand ecological challenges in aquatic ecosystems: how can mesocosms be used to advance solutions?
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Part of Freshwater Biology, p. 1748-1759, 2024
- DOI for Cyanobacteria can benefit from freshwater salinization following the collapse of dominant phytoplankton competitors and zooplankton herbivores
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Global freshwater distribution of Telonemia protists
Part of The ISME Journal, 2024
- DOI for Global freshwater distribution of Telonemia protists
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Part of Water Research, 2024
- DOI for Disinfection by-product formation potential in response to variability in dissolved organic matter and nutrient inputs: Insights from a mesocosm study
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Part of Limnology and Oceanography Letters, p. 19-29, 2023
- DOI for Lake salinization drives consistent losses of zooplankton abundance and diversity across coordinated mesocosm experiments
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Environmental variability in aquatic ecosystems: Avenues for future multifactorial experiments
Part of Limnology and Oceanography Letters, p. 247-266, 2023
- DOI for Environmental variability in aquatic ecosystems: Avenues for future multifactorial experiments
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Part of Limnology and Oceanography Letters, p. 8-18, 2023
- DOI for Widespread variation in salt tolerance within freshwater zooplankton species reduces the predictability of community-level salt tolerance
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Infection strategies of different chytrids in a diatom spring bloom
Part of Freshwater Biology, p. 972-986, 2023
- DOI for Infection strategies of different chytrids in a diatom spring bloom
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Part of Scientific Reports, 2023
- DOI for Carbon dioxide reduction by photosynthesis undetectable even during phytoplankton blooms in two lakes
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Part of Ecology, 2022
- DOI for Accounting for temporal change in multiple biodiversity patterns improves the inference of metacommunity processes
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Integrating multiple dimensions of ecological stability into a vulnerability framework
Part of Journal of Ecology, p. 374-386, 2022
- DOI for Integrating multiple dimensions of ecological stability into a vulnerability framework
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Part of Proceedings of the National Academy of Sciences of the United States of America, 2022
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Part of The ISME Journal, p. 2635-2643, 2022
- DOI for Effects of ecosystem size-induced environmental fluctuations on the temporal dynamics of community assembly mechanisms
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Part of Limnology and Oceanography, p. 385-400, 2021
- DOI for SITES AquaNet: An open infrastructure for mesocosm experiments with high frequency sensor monitoring across lakes
- Download full text (pdf) of SITES AquaNet: An open infrastructure for mesocosm experiments with high frequency sensor monitoring across lakes
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Part of Ecology, 2021
- DOI for Functionally reversible impacts of disturbances on lake food webs linked to spatial and seasonal dependencies
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Warming mediates the resistance of aquatic bacteria to invasion during community coalescence
Part of Molecular Ecology, p. 1345-1356, 2021
- DOI for Warming mediates the resistance of aquatic bacteria to invasion during community coalescence
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Association between Aquatic Micropollutant Dissipation and River Sediment Bacterial Communities
Part of Environmental Science and Technology, p. 14380-14392, 2020
- DOI for Association between Aquatic Micropollutant Dissipation and River Sediment Bacterial Communities
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Part of Scientific Reports, 2020
- DOI for Disturbance history can increase functional stability in the face of both repeated disturbances of the same type and novel disturbances
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Part of Scientific Reports, p. 1-13, 2020
- DOI for Using null models to compare bacterial and microeukaryotic metacommunity assembly under shifting environmental conditions
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Streamlined and Abundant Bacterioplankton Thrive in Functional Cohorts
Part of mSystems, 2020
- DOI for Streamlined and Abundant Bacterioplankton Thrive in Functional Cohorts
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River biofilms adapted to anthropogenic disturbances are more resistant to WWTP inputs
Part of FEMS Microbiology Ecology, 2020
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Part of Scientific Reports, 2019
- DOI for Thickness determines microbial community structure and function in nitrifying biofilms via deterministic assembly
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Decomposing multiple dimensions of stability in global change experiments
Part of Ecology Letters, p. 21-30, 2018
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Part of Environmental Microbiology Reports, p. 493-500, 2018
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Part of Frontiers in Microbiology, 2018
- DOI for Dispersal Modifies the Diversity and Composition of Active Bacterial Communities in Response to a Salinity Disturbance
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Increased water colour affects freshwater plankton communities in a mesocosm study
Part of Aquatic Microbial Ecology, p. 1-17, 2018
- DOI for Increased water colour affects freshwater plankton communities in a mesocosm study
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Part of Scientific Reports, 2018
- DOI for High abundances of the nuisance raphidophyte Gonyostomum semen in brown water lakes are associated with high concentrations of iron
- Download full text (pdf) of High abundances of the nuisance raphidophyte Gonyostomum semen in brown water lakes are associated with high concentrations of iron
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Dispersal timing determines the importance of priority effects in bacterial communities
Part of The ISME Journal, p. 644-646, 2018
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Functional and Compositional Stability of Bacterial Metacommunities in Response to Salinity Changes
Part of Frontiers in Microbiology, 2017
- DOI for Functional and Compositional Stability of Bacterial Metacommunities in Response to Salinity Changes
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Part of Environmental Microbiology, p. 251-260, 2017
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Part of The ISME Journal, p. 1764-1776, 2017
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Bacterial metacommunity organization in a highly connected aquatic system
Part of FEMS Microbiology Ecology, 2017
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Part of Environmental Microbiology Reports, p. 479-485, 2016
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Part of PLOS ONE, 2016
- DOI for Effects of Dispersal and Initial Diversity on the Composition and Functional Performance of Bacterial Communities
- Download full text (pdf) of Effects of Dispersal and Initial Diversity on the Composition and Functional Performance of Bacterial Communities
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Part of Ecology, p. 2716-2728, 2016
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Part of Environmental Microbiology, p. 2275-2287, 2015
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The spatial structure of bacterial communities is influenced by historical environmental conditions
Part of Ecology, p. 1134-1140, 2014
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Part of FEMS Microbiology Ecology, p. 102-112, 2014
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Can marine bacteria be recruited from freshwater sources and the air?
Part of The ISME Journal, p. 2423-2430, 2014
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Weak seasonality and synchrony among bacterial communities in small pools
Part of Aquatic Microbial Ecology, p. 223-229, 2013
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Weak seasonality and synchrony among bacterial communities in small pools
Part of Aquatic Microbial Ecology, p. 223-229, 2013
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Biogeography of bacterial communities exposed to progressive long-term environmental change
Part of The ISME Journal, p. 937-948, 2013
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Mechanisms determining the fate of dispersed bacterial communities in new environments
Part of ISME Journal, p. 61-71, 2013
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Part of BMC Ecology, p. 14, 2012
- DOI for Role of functionally dominant species in varying environmental regimes: evidence for the performance-enhancing effect of biodiversity
- Download full text (pdf) of Role of functionally dominant species in varying environmental regimes: evidence for the performance-enhancing effect of biodiversity
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Effects of Disturbance Intensity and Frequency on Bacterial Community Composition and Function
Part of PLOS ONE, 2012
- DOI for Effects of Disturbance Intensity and Frequency on Bacterial Community Composition and Function
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Temporal variation of beta-diversity and assembly mechanisms in a bacterial metacommunity
Part of The ISME Journal, p. 1107-1114, 2012
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Importance of space and the local environment for linking local and regional abundances of microbes
Part of Aquatic Microbial Ecology, p. 35-45, 2012
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Unraveling assembly of stream biofilm communities
Part of The ISME Journal: multidisciplinary journal of microbial ecology, p. 1459-1468, 2012
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Part of The ISME Journal, p. 1127-1136, 2012
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Fundamentals of microbial community resistance and resilience
Part of Frontiers in Microbiology, p. 417, 2012
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Function-specific response to depletion of microbial diversity
Part of The ISME Journal, p. 351-361, 2011
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Part of The ISME Journal, p. 1086-1094, 2011
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Bacterial biodiversity-ecosystem function relations are modified by environmental complexity
Part of PLOS ONE, 2010
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Regional invariance among microbial communities
Part of Ecology Letters, p. 118-127, 2010
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Part of Environmental Microbiology, p. 658-669, 2010
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Part of Soil Biology and Biochemistry, p. 2292-2298, 2009
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Resource availability influences the diversity of a functional group of heterotrophic soil bacteria.
Part of Environmental Microbiology, p. 2245-2256, 2008
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The role of environmental and spatial factors for the composition of aquatic bacterial communities
Part of Ecology, p. 2154-2161, 2007
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Does ecosystem size determine aquatic bacterial richness? Comment
Part of Ecology, p. 252-253, 2007
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Changes in bacterial community composition along a solar radiation gradient in humic waters
Part of AQUATIC SCIENCES, p. 415-424, 2006
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Part of FEMS Microbiology Ecology, p. 406-417, 2006
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Part of Applied and Environmental Microbiology, p. 212-220, 2006
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Weak coupling between community composition and functioning of aquatic bacteria
Part of Limnology and Oceanography, p. 957-967, 2005
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Growth dynamics within bacterial communities in riverine and estuarine batch cultures
Part of Aquatic Microbial Ecology, p. 137-148, 2004
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Growth dynamics within bacterial communities in riverine and estuarine batch cultures
Part of Aquatic Microbial Ecology, p. 137-148, 2004
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Part of FEMS Microbiology Ecology, p. 189-202, 2003
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Part of FEMS Microbiology Ecology, p. 189-202, 2003
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Part of Applied and Environmental Microbiology, p. 3701-3709, 2003
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Part of Appl Environ Microbiol, p. 3701-9, 2003
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Regulation of bacterial biomass and community structure by metazoan and protozoan predation
Part of LIMNOLOGY AND OCEANOGRAPHY, p. 121-134, 2001
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Part of Ecology
Articles, review/survey
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Part of Limnology and Oceanography Letters, 2026
- DOI for The Zooplankton International Geospatial dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research
- Download full text (pdf) of The Zooplankton International Geospatial dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research
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Partitioning species contributions to ecological stability in disturbed communities
Part of Ecological Monographs, 2025
- DOI for Partitioning species contributions to ecological stability in disturbed communities
- Download full text (pdf) of Partitioning species contributions to ecological stability in disturbed communities
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Freshwater salinisation: a research agenda for a saltier world
Part of Trends in Ecology & Evolution, p. 440-453, 2022
- DOI for Freshwater salinisation: a research agenda for a saltier world
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Microbial Community Resilience across Ecosystems and Multiple Disturbances
Part of Microbiology and molecular biology reviews, 2021
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Factors influencing aquatic and terrestrial bacterial community assembly
Part of Environmental Microbiology Reports, p. 306-315, 2019
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The legacy of the past: effects of historical processes on microbial metacommunities
Part of Aquatic Microbial Ecology, p. 13-19, 2017
- DOI for The legacy of the past: effects of historical processes on microbial metacommunities
- Download full text (pdf) of The legacy of the past: effects of historical processes on microbial metacommunities
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Local and regional factors influencing bacterial community assembly
Part of Environmental Microbiology Reports, p. 1-9, 2012