Sylvain Glemin

Estimating the Reduction in Genetic Diversity from Background Selection under Non-equilibrium Demography and Partial Selfing

Mackintosh, Alexander; Brault, Maxence; Roze, Denis; Lascoux, Martin et al.

Part of Molecular biology and evolution, 2026

• DOI for Estimating the Reduction in Genetic Diversity from Background Selection under Non-equilibrium Demography and Partial Selfing
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Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation

Nicolas, Léa A.; Berdan, Emma L.; Wellenreuther, Maren; Colinet, Hervé et al.

Part of Heredity, 2025

• DOI for Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation

Mating system and the evolution of recombination rates in seed plants

Brazier, Thomas; Stetsenko, Roman; Roze, Denis; Glémin, Sylvain

Part of Journal of Evolutionary Biology, p. 920-929, 2025

• DOI for Mating system and the evolution of recombination rates in seed plants
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Sex unfolded: sex, asex, sexes

Roze, Denis; Glemin, Sylvain; Lenormand, Thomas; Van Doninck, Karine

Part of Journal of Evolutionary Biology, p. 787-797, 2025

• DOI for Sex unfolded: sex, asex, sexes

Mating systems and recombination landscape strongly shape genetic diversity and selection in wheat relatives

Burgarella, Concetta; Bremaud, Marie-Fleur; Von Hirschheydt, Gesa; Viader, Veronique et al.

Part of Evolution Letters, p. 866-880, 2024

• DOI for Mating systems and recombination landscape strongly shape genetic diversity and selection in wheat relatives
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Estimating the Reduction in Genetic Diversity from Background Selection under Non-equilibrium Demography and Partial Selfing

Mackintosh, Alexander; Brault, Maxence; Roze, Denis; Lascoux, Martin et al.

Part of Molecular biology and evolution, 2026

• DOI for Estimating the Reduction in Genetic Diversity from Background Selection under Non-equilibrium Demography and Partial Selfing
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Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation

Nicolas, Léa A.; Berdan, Emma L.; Wellenreuther, Maren; Colinet, Hervé et al.

Part of Heredity, 2025

• DOI for Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation

Mating system and the evolution of recombination rates in seed plants

Brazier, Thomas; Stetsenko, Roman; Roze, Denis; Glémin, Sylvain

Part of Journal of Evolutionary Biology, p. 920-929, 2025

• DOI for Mating system and the evolution of recombination rates in seed plants
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Sex unfolded: sex, asex, sexes

Roze, Denis; Glemin, Sylvain; Lenormand, Thomas; Van Doninck, Karine

Part of Journal of Evolutionary Biology, p. 787-797, 2025

• DOI for Sex unfolded: sex, asex, sexes

Mating systems and recombination landscape strongly shape genetic diversity and selection in wheat relatives

Burgarella, Concetta; Bremaud, Marie-Fleur; Von Hirschheydt, Gesa; Viader, Veronique et al.

Part of Evolution Letters, p. 866-880, 2024

• DOI for Mating systems and recombination landscape strongly shape genetic diversity and selection in wheat relatives
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Diversity in Recombination Hotspot Characteristics and Gene Structure Shape Fine-Scale Recombination Patterns in Plant Genomes

Brazier, Thomas; Glemin, Sylvain

Part of Molecular biology and evolution, 2024

• DOI for Diversity in Recombination Hotspot Characteristics and Gene Structure Shape Fine-Scale Recombination Patterns in Plant Genomes
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Separating phases of allopolyploid evolution with resynthesized and natural Capsella bursa-pastoris

Duan, Tianlin; Sicard, Adrien; Glemin, Sylvain; Lascoux, Martin

Part of eLIFE, 2024

• DOI for Separating phases of allopolyploid evolution with resynthesized and natural Capsella bursa-pastoris
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Polygenic selection to a changing optimum under self-fertilisation

Hartfield, Matthew; Glemin, Sylvain

Part of PLOS Genetics, 2024

• DOI for Polygenic selection to a changing optimum under self-fertilisation
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RIDGE, a tool tailored to detect gene flow barriers across species pairs

Burban, Ewen; Tenaillon, Maud I.; Glemin, Sylvain

Part of Molecular Ecology Resources, 2024

• DOI for RIDGE, a tool tailored to detect gene flow barriers across species pairs
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Parallel loss of sexual reproduction in field populations of a brown alga sheds light on the mechanisms underlying the emergence of asexuality

Hoshino, Masakazu; Cossard, Guillaume; Haas, Fabian B.; Kane, Emma I. et al.

Part of Nature Ecology & Evolution, p. 1916-1932, 2024

• DOI for Parallel loss of sexual reproduction in field populations of a brown alga sheds light on the mechanisms underlying the emergence of asexuality
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Expression pattern of resynthesized allotetraploid Capsella is determined by hybridization, not whole genome duplication

Duan, Tianlin; Sicard, Adrien; Glémin, Sylvain; Lascoux, Martin

Part of New Phytologist, p. 339-353, 2023

• DOI for Expression pattern of resynthesized allotetraploid Capsella is determined by hybridization, not whole genome duplication
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Cosegregation of recombinant chromatids maintains genome-wide heterozygosity in an asexual nematode

Blanc, Caroline; Saclier, Nathanaelle; Le Faou, Ehouarn; Marie-Orleach, Lucas et al.

Part of Science Advances, 2023

• DOI for Cosegregation of recombinant chromatids maintains genome-wide heterozygosity in an asexual nematode
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Opposing effects of plant traits on diversification

Anderson, Bruce; Pannell, John; Billiard, Sylvain; Burgarella, Concetta et al.

Part of iScience, 2023

• DOI for Opposing effects of plant traits on diversification
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Crop domestication as a step toward reproductive isolation

Tenaillon, Maud I.; Burban, Ewen; Huynh, Stella; Wojcik, Arthur et al.

Part of American Journal of Botany, 2023

• DOI for Crop domestication as a step toward reproductive isolation

Trait‐dependent diversification in angiosperms: Patterns, models and data

Helmstetter, Andrew J.; Zenil‐Ferguson, Rosana; Sauquet, Hervé; Otto, Sarah P. et al.

Part of Ecology Letters, p. 640-657, 2023

• DOI for Trait‐dependent diversification in angiosperms: Patterns, models and data

Establishment of local adaptation in partly self-fertilizing populations

Trickovic, Bogi; Glemin, Sylvain

Part of Genetics, 2022

• DOI for Establishment of local adaptation in partly self-fertilizing populations

Diversity and determinants of recombination landscapes in flowering plants

Brazier, Thomas; Glémin, Sylvain

Part of PLOS Genetics, 2022

• DOI for Diversity and determinants of recombination landscapes in flowering plants
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Hunting for Beneficial Mutations: Conditioning on SIFT Scores When Estimating the Distribution of Fitness Effect of New Mutations

Chen, Jun; Bataillon, Thomas; Glemin, Sylvain; Lascoux, Martin

Part of Genome Biology and Evolution, 2022

• DOI for Hunting for Beneficial Mutations: Conditioning on SIFT Scores When Estimating the Distribution of Fitness Effect of New Mutations
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The relative role of plasticity and demographic history in Capsella bursa-pastoris: a common garden experiment in Asia and Europe

Cornille, Amandine; Tiret, Mathieu; Salcedo, Adriana; Huang, Huirun R. et al.

Part of AoB Plants, 2022

• DOI for The relative role of plasticity and demographic history in Capsella bursa-pastoris: a common garden experiment in Asia and Europe
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Competitive ability depends on mating system and ploidy level across Capsella species

Orsucci, Marion; Yang, Xuyue; Vanikiotis, Theofilos; Guerrina, Maria et al.

Part of Annals of Botany, p. 697-708, 2022

• DOI for Competitive ability depends on mating system and ploidy level across Capsella species
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Mating system and speciation I: Accumulation of genetic incompatibilities in allopatry

Marie-Orleach, Lucas; Brochmann, Christian; Glemin, Sylvain

Part of PLOS Genetics, 2022

• DOI for Mating system and speciation I: Accumulation of genetic incompatibilities in allopatry
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How broad is the selfing syndrome? Insights from convergent evolution of gene expression across species and tissues in the Capsella genus

Zhang, Zebin; Kryvokhyzha, Dmytro; Orsucci, Marion; Glemin, Sylvain et al.

Part of New Phytologist, p. 2344-2357, 2022

• DOI for How broad is the selfing syndrome? Insights from convergent evolution of gene expression across species and tissues in the Capsella genus
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The Road to Sorghum Domestication: Evidence From Nucleotide Diversity and Gene Expression Patterns

Burgarella, Concetta; Berger, Angelique; Glemin, Sylvain; David, Jacques et al.

Part of Frontiers in Plant Science, 2021

• DOI for The Road to Sorghum Domestication: Evidence From Nucleotide Diversity and Gene Expression Patterns
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Analysis of diversity-dependent species evolution using concepts in population genetics

Kaj, Ingemar; Glémin, Sylvain; Tahir, Daniah; Lascoux, Martin

Part of Journal of Mathematical Biology, 2021

• DOI for Analysis of diversity-dependent species evolution using concepts in population genetics
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Balancing selection in self-fertilizing populations

Glemin, Sylvain

Part of Evolution, p. 1011-1029, 2021

• DOI for Balancing selection in self-fertilizing populations

Dioecy Is Associated with High Genetic Diversity and Adaptation Rates in the Plant Genus Silene

Muyle, Aline; Martin, Helene; Zemp, Niklaus; Mollion, Maeva et al.

Part of Molecular biology and evolution, p. 805-818, 2021

• DOI for Dioecy Is Associated with High Genetic Diversity and Adaptation Rates in the Plant Genus Silene
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From Drift to Draft: How Much Do Beneficial Mutations Actually Contribute to Predictions of Ohta's Slightly Deleterious Model of Molecular Evolution?

Chen, Jun; Glemin, Sylvain; Lascoux, Martin

Part of Genetics, p. 1005-1018, 2020

• DOI for From Drift to Draft: How Much Do Beneficial Mutations Actually Contribute to Predictions of Ohta's Slightly Deleterious Model of Molecular Evolution?

Evolution of putative barrier loci at an intermediate stage of speciation with gene flow in campions (Silene)

Liu, Xiaodong; Glemin, Sylvain; Karrenberg, Sophie

Part of Molecular Ecology, p. 3511-3525, 2020

• DOI for Evolution of putative barrier loci at an intermediate stage of speciation with gene flow in campions (Silene)
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Shift in ecological strategy helps marginal populations of shepherd's purse (Capsella bursa-pastoris) to overcome a high genetic load

Orsucci, Marion; Milesi, Pascal; Hansen, Johanna; Girodolle, Johanna et al.

Part of Proceedings of the Royal Society of London. Biological Sciences, 2020

• DOI for Shift in ecological strategy helps marginal populations of shepherd's purse (Capsella bursa-pastoris) to overcome a high genetic load
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Modeling a trait-dependent diversification process coupled with molecular evolution on a random species tree

Tahir, Daniah; Glemin, Sylvain; Lascoux, Martin; Kaj, Ingemar

Part of Journal of Theoretical Biology, p. 189-203, 2019

• DOI for Modeling a trait-dependent diversification process coupled with molecular evolution on a random species tree

Pervasive hybridizations in the history of wheat relatives

Glemin, Sylvain; Scornavacca, Celine; Dainat, Jacques; Burgarella, Concetta et al.

Part of Science Advances, 2019

• DOI for Pervasive hybridizations in the history of wheat relatives
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Estimating the Fitness Effect of Deleterious Mutations During the Two Phases of the Life Cycle: A New Method Applied to the Root-Rot Fungus Heterobasidion parviporum

Clergeot, Pierre-Henri; Rode, Nicolas O.; Glemin, Sylvain; Durling, Mikael Brandstrom et al.

Part of Genetics, p. 963-976, 2019

• DOI for Estimating the Fitness Effect of Deleterious Mutations During the Two Phases of the Life Cycle: A New Method Applied to the Root-Rot Fungus Heterobasidion parviporum

Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication

Gros-Balthazard, Muriel; Besnard, Guillaume; Sarah, Gautier; Holtz, Yan et al.

Part of The Plant Journal, p. 143-157, 2019

• DOI for Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication
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Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae)

Kryvokhyzha, Dmytro; Salcedo, Adriana; Eriksson, Mimmi C.; Duan, Tianlin et al.

Part of PLOS Genetics, 2019

• DOI for Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae)
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Towards the new normal: Transcriptomic convergence and genomic legacy of the two subgenomes of an allopolyploid weed (Capsella bursa-pastoris)

Kryvokhyzha, Dmytro; Milesi, Pascal; Duan, Tianlin; Orsucci, Marion et al.

Part of PLOS Genetics, 2019

• DOI for Towards the new normal: Transcriptomic convergence and genomic legacy of the two subgenomes of an allopolyploid weed (Capsella bursa-pastoris)
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Codon Usage Bias in Animals: Disentangling the Effects of Natural Selection, Effective Population Size, and GC-Biased Gene Conversion

Galtier, Nicolas; Roux, Camille; Rousselle, Marjolaine; Romiguier, Jonathan et al.

Part of Molecular biology and evolution, p. 1092-1103, 2018

• DOI for Codon Usage Bias in Animals: Disentangling the Effects of Natural Selection, Effective Population Size, and GC-Biased Gene Conversion

Competitive ability of Capsella species with different mating systems and ploidy levels

Mendoza, Sandra Petrone; Lascoux, Martin; Glemin, Sylvain

Part of Annals of Botany, p. 1257-1264, 2018

• DOI for Competitive ability of Capsella species with different mating systems and ploidy levels

Evolutionary forces affecting synonymous variations in plant genomes

Clement, Yves; Sarah, Gautier; Holtz, Yan; Homa, Felix et al.

Part of PLOS Genetics, 2017

• DOI for Evolutionary forces affecting synonymous variations in plant genomes
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Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data

Tataru, Paula; Mollion, Maeva; Glemin, Sylvain; Bataillon, Thomas

Part of Genetics, p. 1103-1119, 2017

• DOI for Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data
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Using the Ornstein-Uhlenbeck process to model the evolution of interacting populations

Bartoszek, Krzysztof; Glemin, Sylvain; Kaj, Ingemar; Lascoux, Martin

Part of Journal of Theoretical Biology, p. 35-45, 2017

• DOI for Using the Ornstein-Uhlenbeck process to model the evolution of interacting populations

Experimental Evidence for the Negative Effects of Self-Fertilization on the Adaptive Potential of Populations

Noel, Elsa; Jarne, Philippe; Glemin, Sylvain; MacKenzie, Alicia et al.

Part of Current Biology, p. 237-242, 2017

• DOI for Experimental Evidence for the Negative Effects of Self-Fertilization on the Adaptive Potential of Populations

Domestication rewired gene expression and nucleotide diversity patterns in tomato

Sauvage, Christopher; Rau, Andrea; Aichholz, Charlotte; Chadoeuf, Joel et al.

Part of The Plant Journal, p. 631-645, 2017

• DOI for Domestication rewired gene expression and nucleotide diversity patterns in tomato

Genetic Diversity and the Efficacy of Purifying Selection across Plant and Animal Species

Chen, Jun; Glemin, Sylvain; Lascoux, Martin

Part of Molecular biology and evolution, p. 1417-1428, 2017

• DOI for Genetic Diversity and the Efficacy of Purifying Selection across Plant and Animal Species

The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae)

Kryvokhyzha, Dmytro; Holm, Karl; Chen, Jun; Cornille, Amandine et al.

Part of Molecular Ecology, p. 1106-1121, 2016

• DOI for The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae)

Evolution of sex chromosomes prior to speciation in the dioecious Phoenix species

Cherif, E.; Zehdi-Azouzi, S.; Crabos, A.; Castillo, K. et al.

Part of Journal of Evolutionary Biology, p. 1513-1522, 2016

• DOI for Evolution of sex chromosomes prior to speciation in the dioecious Phoenix species

Limits to Adaptation in Partially Selfing Species

Hartfield, Matthew; Glemin, Sylvain

Part of Genetics, p. 959-+, 2016

• DOI for Limits to Adaptation in Partially Selfing Species

Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd's purse (Capsella bursa-pastoris)

Cornille, Amandine; Salcedo, A.; Kryvokhyzha, Dmytro; Glemin, Sylvain et al.

Part of Molecular Ecology, p. 616-629, 2016

• DOI for Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd's purse (Capsella bursa-pastoris)

Quantification of GC-biased gene conversion in the human genome

Glemin, Sylvain; Arndt, Peter F.; Messer, Philipp W.; Petrov, Dmitri et al.

Part of Genome Research, p. 1215-1228, 2015

• DOI for Quantification of GC-biased gene conversion in the human genome
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Extreme Recombination Frequencies Shape Genome Variation and Evolution in the Honeybee, Apis mellifera

Wallberg, Andreas; Glemin, Sylvain; Webster, Matthew T.

Part of PLOS Genetics, 2015

• DOI for Extreme Recombination Frequencies Shape Genome Variation and Evolution in the Honeybee, Apis mellifera
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Introns Structure Patterns of Variation in Nucleotide Composition in Arabidopsis thaliana and Rice Protein-Coding Genes

Ressayre, Adrienne; Glemin, Sylvain; Montalent, Pierre; Serre-Giardi, Laurana et al.

Part of Genome Biology and Evolution, p. 2913-2928, 2015

• DOI for Introns Structure Patterns of Variation in Nucleotide Composition in Arabidopsis thaliana and Rice Protein-Coding Genes
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How Does Selfing Affect the Pace and Process of Speciation?

Marie-Orleach, Lucas; Glémin, Sylvain; Brandrud, Marie K.; Brysting, Anne K. et al.

Part of Cold Spring Harbor Perspectives in Biology, 2024

• DOI for How Does Selfing Affect the Pace and Process of Speciation?

What does the distribution of fitness effects of new mutations reflect?: Insights from plants

Chen, Jun; Bataillon, Thomas; Glemin, Sylvain; Lascoux, Martin

Part of New Phytologist, p. 1613-1619, 2022

• DOI for What does the distribution of fitness effects of new mutations reflect?: Insights from plants
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The Evolutionary Interplay between Adaptation and Self-Fertilization

Hartfield, Matthew; Bataillon, Thomas; Glemin, Sylvain

Part of Trends in Genetics, p. 420-431, 2017

• DOI for The Evolutionary Interplay between Adaptation and Self-Fertilization

Genomic divergence and reproductive isolation in Silene

Liu, Xiaodong; Glemin, Sylvain; Karrenberg, Sophie