Publications

Ancient pathogen genomics in Africa: Current evidence and future directions

Vukovikj, Maja; Mavian, Carla; Wang, Helen; Gifford, Robert J. et al.

Part of Trends in Microbiology, p. 1003-1016, 2026

Article, review/survey

• DOI for Ancient pathogen genomics in Africa: Current evidence and future directions
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Genome-wide evidence for the local ancestry of the Agotes from Navarra, Spain

Portela-Estevez, Alicia; Acuna-Alonzo, Alin P.; Fortes-Lima, Cesar A.; de Cabo, Elsa et al.

Part of iScience, 2026

Article in journal

• DOI for Genome-wide evidence for the local ancestry of the Agotes from Navarra, Spain
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Diachronic reuse of Neolithic burial monuments by Bronze Age newcomers in Southwestern Britain

Vukovic, Nikola; Bernhardsson, Carolina; Edlund, Hanna; Delbarre, Gabrielle et al.

Part of Scientific Reports, 2026

Article in journal

• DOI for Diachronic reuse of Neolithic burial monuments by Bronze Age newcomers in Southwestern Britain
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Orthodentine‐osteodentine and osteocytic‐anosteocytic transition inferred from Silurian stem chondrichthyan dermal jawbones with ever‐white teeth overgrown by brown denticles

Kang, Jia‐Cih; Blom, Henning; Märss, Tiiu; Chen, Donglei

Part of Developmental Dynamics, 2026

Article in journal

• DOI for Orthodentine‐osteodentine and osteocytic‐anosteocytic transition inferred from Silurian stem chondrichthyan dermal jawbones with ever‐white teeth overgrown by brown denticles
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Paleogenomic sex inference of mammoth remains sheds light on the anthropogenic nature of bone accumulations

Moots, Hannah M.; Larsdotter, Juliana; Oteo-Garcia, Gonzalo; Dehasque, Marianne et al.

Part of Current Biology, p. 4233-4242, 2026

Article in journal

• DOI for Paleogenomic sex inference of mammoth remains sheds light on the anthropogenic nature of bone accumulations
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Modeling of Biodiversity Dynamics After Forest Clear-cutting by Plot Aggregation

Wigren, Torbjörn; Zachariah, Dave; Jie, Vun Wen; Andermann, Tobias et al.

2026

Report

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Investigating a Devonian vertebrate assemblage with synchrotron microtomography of coprolites

Rebillard, Arnaud; Dupret, Vincent; Beznosov, Pavel; Ahlberg, Per Erik

Part of Scientific Reports, 2026

Article in journal

• DOI for Investigating a Devonian vertebrate assemblage with synchrotron microtomography of coprolites
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Equal in death: Ancient genomic analysis of children's early Christian burials

Krzewinska, Maja; Kjellström, Anna; Yaka, Reyhan; Rodríguez-Varela, Ricardo et al.

Part of Science Advances, 2026

Article in journal

• DOI for Equal in death: Ancient genomic analysis of children's early Christian burials
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From genome to field, biocontrol efficacy of Bacillus subtilis strain M10 against Rhizoctonia solani in common bean

Wekesa, Tofick Barasa; Kennedy, Grace; Barminga, Damaris; Wekesa, Alena Petra et al.

Part of Scientific Reports, 2026

Article in journal

• DOI for From genome to field, biocontrol efficacy of Bacillus subtilis strain M10 against Rhizoctonia solani in common bean
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A comparative study of the diversity and ecology of two Silurian vertebrate assemblages from Estonia

Rönnberg, Hampus

2026

Student thesis

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Transcriptional divergence among different mating-type strains and their cross of Morchella sextelata during the asexual stage

Ling, Jia; Chen, Meng-Qian; Ryberg, Martin; Yang, Zhu L. et al.

Part of Fungal Biology, 2026

Article in journal

• DOI for Transcriptional divergence among different mating-type strains and their cross of Morchella sextelata during the asexual stage

Quantifying the impact of forestry practices on biodiversity using causal inference methods

Jie, Vun Wen; Nyström, Jakob; Wigren, Torbjörn; Schön, Thomas B. et al.

2026

Conference paper

Phylogenetic Placement environmental micro_eukaryotes using de-novo Transcriptome Assembly of Smart-seq3xpress Data

Rahnama Toupkanloo, Marzieh

2026

Student thesis

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Living in each other's pockets: insights into the life cycle of Tremella caloplacae s. l.

Freire-Rallo, Sandra; Tuovinen Nogerius, Veera; Wedin, Mats; Millanes, Ana M.

Part of IMA Fungus, 2026

Article in journal

• DOI for Living in each other's pockets: insights into the life cycle of Tremella caloplacae s. l.
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Environmental phylogenetics supports a steady diversification of crown eukaryotes starting from the mid-Proterozoic

Sandin, Miguel M.; Cohen, Phoebe A.; Morlon, Helene; Burki, Fabien

Part of Proceedings of the National Academy of Sciences of the United States of America, 2026

Article in journal

• DOI for Environmental phylogenetics supports a steady diversification of crown eukaryotes starting from the mid-Proterozoic
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Another dark taxon comes to light: Semicentenialomycetes, a new class within the Pucciniomycotina (Basidiomycota), and its first described representative, Semicentenialea rex

Tuovinen Nogerius, Veera; Sanchez-Garcia, Marisol; Kluting, Kerri; Heinonsalo, Jussi et al.

Part of IMA Fungus, 2026

Article in journal

• DOI for Another dark taxon comes to light: Semicentenialomycetes, a new class within the Pucciniomycotina (Basidiomycota), and its first described representative, Semicentenialea rex
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Ancestry, admixture, and pathogens in contemporaneous Neolithic farmers and foragers on the Island of Gotland

Fraser, Magdalena; Sanchez-Quinto, Federico; Kirdök, Emrah; Ausmees, Kristiina et al.

Part of Communications Biology, 2026

Article in journal

• DOI for Ancestry, admixture, and pathogens in contemporaneous Neolithic farmers and foragers on the Island of Gotland
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Earliest Jurassic plant assemblages from Sweden reveal a low-diversity ginkgoalean and cheirolepid flora dominating the post-extinction landscape

Quiroz-Cabascango, Daniela; Vajda, Vivi; McLoughlin, Stephen; Niedzwiedzki, Grzegorz

Part of Annals of Botany, p. 1797-1816, 2026

Article in journal

• DOI for Earliest Jurassic plant assemblages from Sweden reveal a low-diversity ginkgoalean and cheirolepid flora dominating the post-extinction landscape
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Revealing the plastid symbioses in the marine centrohelid Meringosphaera: a novel model system for plastid evolution

Walraven, Anne

2026

Doctoral thesis, comprehensive summary

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Early life metabolic disruption: multigenerational consequences on the genome, epigenome and microbiota

de Anca Prado, Violeta

2026

Doctoral thesis, comprehensive summary

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Evaluating the rRNA operon as a universal eukaryotic marker using a nanopore-based metabarcoding workflow

Lassen, Linus

2026

Student thesis

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Experimental demonstration of horizontal gene transfer in fungi

Valová, Zuzana

2026

Student thesis

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Epigenetic changes as regulatory mechanism for the expression of life history stages in Zonotrichia capensis inhabiting an aseasonal environment

Pèrtille, Fábio; Gonzalez- Gomez, Paulina L.; Wingfield, John C.; Guerrero-Bosagna, Carlos

Part of Journal of Avian Biology, 2026

Article in journal

• DOI for Epigenetic changes as regulatory mechanism for the expression of life history stages in Zonotrichia capensis inhabiting an aseasonal environment
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Keep the discussion going! Our response to Nielsen's comment

Högberg, Anders; Brink, Kristian; Brorsson, Torbjörn; Malmström, Helena et al.

Part of Journal of Archaeological Science, 2026

Article in journal

• DOI for Keep the discussion going! Our response to Nielsen's comment
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Ciliary flow and morphology shape mass transport at the surface and within gastrovascular cavities of black corals

Godefroid, Mathilde; Otero-Ferrer, Francisco; Wind-Hansen, Michael; Behrendt, Lars et al.

Part of Communications Biology, 2026

Article in journal

• DOI for Ciliary flow and morphology shape mass transport at the surface and within gastrovascular cavities of black corals
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