Publications

Standard Addition as a Method for Quantitative Mass Spectrometry Imaging

Davidová, Lucie; Lanekoff, Ingela

Part of Analytical Chemistry, p. 11572-11580, 2025

• DOI for Standard Addition as a Method for Quantitative Mass Spectrometry Imaging

Observation of early events in the photoactivation of Myxobacterial phytochrome using time-resolved serial femtosecond crystallography

Malla, Tek Narsingh; Aldama, Luis; Leon, Viridiana; Feliz, Denisse et al.

Part of Communications Chemistry, 2025

• DOI for Observation of early events in the photoactivation of Myxobacterial phytochrome using time-resolved serial femtosecond crystallography
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Mapping effective microRNA pairing beyond the seed using abasic modifications

Kosek, David; Petzold, Katja; Andersson, Emma R.

Part of Nucleic Acids Research, 2025

• DOI for Mapping effective microRNA pairing beyond the seed using abasic modifications
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Linker-Determined Folding and Hydrophobic Interactions Explain a Major Difference in PROTAC Cell Permeability

Poongavanam, Vasanthanathan; Peintner, Stefan; Abeje, Yordanos; Kölling, Florian et al.

Part of ACS Medicinal Chemistry Letters, p. 681-687, 2025

• DOI for Linker-Determined Folding and Hydrophobic Interactions Explain a Major Difference in PROTAC Cell Permeability
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Flavonoids from the leaves of Monanthotaxis filipes modulate PCSK9 and LDLR

Mayeka, James G.; Atilaw, Yoseph; Shadrack, Daniel M.; Sarnyai, Farkas et al.

Part of Scientific African, 2025

• DOI for Flavonoids from the leaves of Monanthotaxis filipes modulate PCSK9 and LDLR
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Dynamically chiral phosphonic acid-type metallo-β-lactamase inhibitors

Gulyás, Kinga; Zhou, Liping; Salamonsen, Daniel; Prester, Andreas et al.

Part of Communications Chemistry, 2025

• DOI for Dynamically chiral phosphonic acid-type metallo-β-lactamase inhibitors
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Spatial mapping of the AA-PGE₂-EP axis in multiple sclerosis lesions

Hansen, Cathrin E.; Konings, Julia; Toth, Gabor; Chornyi, Serhii et al.

Part of Acta Neuropathologica, 2025

• DOI for Spatial mapping of the AA-PGE₂-EP axis in multiple sclerosis lesions
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State-of-the-art Capillary Electrophoresis Mass Spectrometry Methods for Analyzing the Polar Metabolome

Duncan, Kyle D.; Lanekoff, Ingela

Part of Advanced Mass Spectrometry-Based Analytical Separation Techniques for Probing the Polar Metabolome, p. 125-164, Royal Society of Chemistry, 2021

• DOI for State-of-the-art Capillary Electrophoresis Mass Spectrometry Methods for Analyzing the Polar Metabolome

Impact of Linker Composition on VHL PROTAC Cell Permeability

Abeje, Yordanos Esubalew; Wieske, Hermina H. E.; Poongavanam, Vasanthanathan; Maassen, Stefanie et al.

Part of Journal of Medicinal Chemistry, p. 638-657, 2024

• DOI for Impact of Linker Composition on VHL PROTAC Cell Permeability
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Optimising in-cell NMR acquisition for nucleic acids

Annecke, Henry T. P.; Eidelpes, Reiner; Feyrer, Hannes; Ilgen, Julian et al.

Part of Journal of Biomolecular NMR, p. 249-264, 2024

• DOI for Optimising in-cell NMR acquisition for nucleic acids
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Severe steroid-related neuropsychiatric symptoms during paediatric acute lymphoblastic leukaemia therapy-An observational Ponte di Legno Toxicity Working Group Study

Anastasopoulou, Stavroula; Swann, Gemma; Andres-Jensen, Liv; Attarbaschi, Andishe et al.

Part of British Journal of Haematology, p. 1450-1459, 2024

• DOI for Severe steroid-related neuropsychiatric symptoms during paediatric acute lymphoblastic leukaemia therapy-An observational Ponte di Legno Toxicity Working Group Study
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Investigating Interaction Dynamics of an Enantioselective Peptide‐Catalyzed Acylation Reaction

Brauser, Matthias; Petzold, Katja; Thiele, Christina M.

Part of Angewandte Chemie International Edition, 2024

• DOI for Investigating Interaction Dynamics of an Enantioselective Peptide‐Catalyzed Acylation Reaction
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Taming Molecular Folding: Anion-Templated Foldamers with Tunable Quaternary Structures

John, Eric A.; Riel, Asia Marie S.; Wieske, Lianne H. E.; Ray, Debmalya et al.

Part of Journal of the American Chemical Society, p. 16419-16427, 2024

• DOI for Taming Molecular Folding: Anion-Templated Foldamers with Tunable Quaternary Structures

Online Direct Infusion Mass Spectrometry of Liquid-Liquid Extraction Phases for Metabolite and Lipid Profiling with the Direct Infusion Probe

Marques, Catia; Blaase, Lena; Lanekoff, Ingela

Part of Metabolites, 2024

• DOI for Online Direct Infusion Mass Spectrometry of Liquid-Liquid Extraction Phases for Metabolite and Lipid Profiling with the Direct Infusion Probe
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Enhancing isomer specificity in mass spectrometry by combining silver ion adduction and ion mobility

Sharma, Varun V.; De Chavez, Danjo; Slade, Susan E.; Lanekoff, Ingela

Part of Talanta Open, 2024

• DOI for Enhancing isomer specificity in mass spectrometry by combining silver ion adduction and ion mobility
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The Influence of Disulfide, Thioacetal and Lanthionine-Bridges on the Conformation of a Macrocyclic Peptide

Darling, William T. P.; Wieske, Hermina H. E.; Cook, Declan T.; Aliev, Abil E. et al.

Part of Chemistry - A European Journal, 2024

• DOI for The Influence of Disulfide, Thioacetal and Lanthionine-Bridges on the Conformation of a Macrocyclic Peptide
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Antiviral Rotenoids and Isoflavones Isolated from Millettia oblata ssp. teitensis

Kiganda, Ivan; Bogaerts, Jonathan; Wieske, Lianne H.E.; Deyou, Tsegaye et al.

Part of Journal of Natural Products, p. 1003-1012, 2024

• DOI for Antiviral Rotenoids and Isoflavones Isolated from Millettia oblata ssp. teitensis
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Elucidating the Binding Mode of Sulfur- and Selenium-Based Cationic Chalcogen-Bond Donors

Akbaba, Sercan; Steinke, Tim; Vogel, Lukas; Engelage, Elric et al.

Part of Chemistry - A European Journal, 2024

• DOI for Elucidating the Binding Mode of Sulfur- and Selenium-Based Cationic Chalcogen-Bond Donors
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Antimicrobial Dihydroflavonols and Isoflavans Isolated from the Root Bark of Dalbergia gloveri

Kiganda, Ivan; Wieske, Lianne H. E.; Nchiozem-Ngnitedem, Vaderament-Alexe; Chalo, Duncan et al.

Part of Journal of Natural Products, p. 2263-2271, 2024

• DOI for Antimicrobial Dihydroflavonols and Isoflavans Isolated from the Root Bark of Dalbergia gloveri
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Bioactive abietenolide diterpenes from Suregada procera

Matundura, Jackson Obegi; Mollel, Jackson T.; Miah, Masum; Said, Joanna et al.

Part of Fitoterapia, 2024

• DOI for Bioactive abietenolide diterpenes from Suregada procera
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Elucidating microRNA-34a organisation within human Argonaute-2 by dynamic nuclear polarisation-enhanced magic angle spinning NMR

Dasgupta, Rubin; Becker, Walter; Petzold, Katja

Part of Nucleic Acids Research, p. 11995-12004, 2024

• DOI for Elucidating microRNA-34a organisation within human Argonaute-2 by dynamic nuclear polarisation-enhanced magic angle spinning NMR
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Cryo-EM structures of a bathy phytochrome histidine kinase reveal a unique light-dependent activation mechanism

Bódizs, Szabolcs; Mészáros, Petra; Grunewald, Lukas; Takala, Heikki et al.

Part of Structure, p. 1952-1962000, 2024

• DOI for Cryo-EM structures of a bathy phytochrome histidine kinase reveal a unique light-dependent activation mechanism
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Molecular chameleons in drug discovery

Poongavanam, Vasanthanathan; Wieske, Lianne H. E.; Peintner, Stefan; Erdélyi, Máté et al.

Part of Nature Reviews Chemistry, p. 45-60, 2024

• DOI for Molecular chameleons in drug discovery

Click chemistry-based bioconjugation of iron oxide nanoparticles

Asad, Shno; Ahl, David; Suárez-López, Yael del Carmen; Erdélyi, Máté et al.

Part of Small, 2025

• DOI for Click chemistry-based bioconjugation of iron oxide nanoparticles
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Interleukin-13 Treatment of Living Lung Tissue Model Alters the Metabolome and Proteome: A Nano-DESI MS Metabolomics and Shotgun Proteomics Study

Tóth, Gábor; Golubova, Anastasia; Falk, Alexander; Bergström Lind, Sara et al.

Part of International Journal of Molecular Sciences, 2024

• DOI for Interleukin-13 Treatment of Living Lung Tissue Model Alters the Metabolome and Proteome: A Nano-DESI MS Metabolomics and Shotgun Proteomics Study
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Is Simultaneous Binding to DNA and Gyrase Important for the Antibacterial Activity of Cystobactamids?

Solga, Danny; Wieske, Hermina; Wilcox, Scott; Zeilinger, Carsten et al.

Part of Chemistry - A European Journal, 2024

• DOI for Is Simultaneous Binding to DNA and Gyrase Important for the Antibacterial Activity of Cystobactamids?
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Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography

Cellini, Andrea; Shankar, Madan Kumar; Nimmrich, Amke; Hunt, Leigh Anna et al.

Part of Nature Chemistry, p. 624-632, 2024

• DOI for Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography
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Exploring the chemical space of orally bioavailable PROTACs

Apprato, Giulia; Poongavanam, Vasanthanathan; Jimenez, Diego Garcia; Atilaw, Yoseph et al.

Part of Drug Discovery Today, 2024

• DOI for Exploring the chemical space of orally bioavailable PROTACs
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Microsecond time-resolved X-ray scattering by utilizing MHz repetition rate at second-generation XFELs

Konold, Patrick; Monrroy, Leonardo; Bellisario, Alfredo; de Matos Filipe, Diogo et al.

Part of Nature Methods, p. 1608-1611, 2024

• DOI for Microsecond time-resolved X-ray scattering by utilizing MHz repetition rate at second-generation XFELs
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Time-resolved serial crystallography to reveal protein structural changes

Mészáros, Petra; Westenhoff, Sebastian

Part of Trends in Biochemical Sciences (TIBS), p. 183-184, 2024

• DOI for Time-resolved serial crystallography to reveal protein structural changes
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Fluorinated captopril analogues inhibit metallo-ll-lactamases and facilitate structure determination of NDM-1 binding pose

Kondratieva, Alexandra; Palica, Katarzyna; Frohlich, Christopher; Hovd, Rebekka Rolfsnes et al.

Part of European Journal of Medicinal Chemistry, 2024

• DOI for Fluorinated captopril analogues inhibit metallo-ll-lactamases and facilitate structure determination of NDM-1 binding pose
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Halogen Bonds of Halogen(I) Ions: Where Are We and Where to Go?

Wieske, Lianne H. E.; Erdélyi, Máté

Part of Journal of the American Chemical Society, p. 3-18, 2023

• DOI for Halogen Bonds of Halogen(I) Ions: Where Are We and Where to Go?
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Revealing Structure and Localization of Steroid Regioisomers through Predictive Fragmentation Patterns in Mass Spectrometry Imaging

Sharma, Varun; Lanekoff, Ingela

Part of Analytical Chemistry, p. 17843-17850, 2023

• DOI for Revealing Structure and Localization of Steroid Regioisomers through Predictive Fragmentation Patterns in Mass Spectrometry Imaging
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α-Aminophosphonate inhibitors of metallo-β-lactamases NDM-1 and VIM-2

Palica, Katarzyna; Deufel, Fritz; Skagseth, Susann; Di Santo Metzler, Gabriela Paula et al.

Part of RSC Medicinal Chemistry, p. 2277-2300, 2023

• DOI for α-Aminophosphonate inhibitors of metallo-β-lactamases NDM-1 and VIM-2
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Refolding of the Deinococcus Radiodurans phytochrome photosensory module and backbone resonance assignment by solution NMR

Vrhovac, Lidija; Levkovets, Maria; Orekhov, Vladislav; Westenhoff, Sebastian

Part of Protein Expression and Purification, 2025

• DOI for Refolding of the Deinococcus Radiodurans phytochrome photosensory module and backbone resonance assignment by solution NMR
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Global and Spatial Metabolomics of Individual Cells Using a Tapered Pneumatically Assisted nano-DESI Probe

Marques-Santos, Cátia M.; Friedrich, Felix; Liu, Liangwen; Castoldi, Francesca et al.

Part of Journal of the American Society for Mass Spectrometry, p. 2518-2524, 2023

• DOI for Global and Spatial Metabolomics of Individual Cells Using a Tapered Pneumatically Assisted nano-DESI Probe
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Signaling Mechanism of Phytochromes in Solution

Isaksson, Linnéa; Gustavsson, Emil; Persson, Cecilia; Brath, Ulrika et al.

Part of Structure, p. 151-160000, 2021

• DOI for Signaling Mechanism of Phytochromes in Solution
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Modulation of Structural Heterogeneity Controls Phytochrome Photoswitching

Gustavsson, Emil; Isaksson, Linnéa; Persson, Cecilia; Mayzel, Maxim et al.

Part of Biophysical Journal, p. 415-421, 2020

• DOI for Modulation of Structural Heterogeneity Controls Phytochrome Photoswitching

3D-printed sheet jet for stable megahertz liquid sample delivery at X-ray free-electron lasers

Konold, Patrick E.; You, Tong; Bielecki, Johan; Valerio, Joana et al.

Part of IUCrJ, p. 662-670, 2023

• DOI for 3D-printed sheet jet for stable megahertz liquid sample delivery at X-ray free-electron lasers
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NanoBiT‐ and NanoBiT/BRET‐based assays allow the analysis of binding kinetics of Wnt‐3a to endogenous Frizzled 7 in a colorectal cancer model

Grätz, Lukas; Sajkowska‐Kozielewicz, Joanna J.; Wesslowski, Janine; Kinsolving, Julia et al.

Part of British Journal of Pharmacology, 2023

• DOI for NanoBiT‐ and NanoBiT/BRET‐based assays allow the analysis of binding kinetics of Wnt‐3a to endogenous Frizzled 7 in a colorectal cancer model

Efficient 3′-pairing renders microRNA targeting less sensitive to mRNA seed accessibility

Kosek, David M; Banijamali, Elnaz; Becker, Walter; Petzold, Katja et al.

Part of Nucleic Acids Research, p. 11162-11177, 2023

• DOI for Efficient 3′-pairing renders microRNA targeting less sensitive to mRNA seed accessibility
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RNA:RNA interaction in ternary complexes resolved by chemical probing

Banijamali, Elnaz; Baronti, Lorenzo; Becker, Walter; Sajkowska-Kozielewicz, Joanna J. et al.

Part of RNA, p. 317-329, 2022

• DOI for RNA:RNA interaction in ternary complexes resolved by chemical probing
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ICARUS: in-situ studies of the solar corona beyond Parker Solar Probe and Solar Orbiter

Krasnoselskikh, Vladimir; Tsurutani, Bruce T.; Dudok de Wit, Thierry; Walker, Simon et al.

Part of Experimental astronomy, p. 277-315, 2022

• DOI for ICARUS: in-situ studies of the solar corona beyond Parker Solar Probe and Solar Orbiter
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Mass Spectrometry of RNA-Binding Proteins during Liquid-Liquid Phase Separation Reveals Distinct Assembly Mechanisms and Droplet Architectures

Sahin, Cagla; Motso, Aikaterini; Gu, Xinyu; Feyrer, Hannes et al.

Part of Journal of the American Chemical Society, p. 10659-10668, 2023

• DOI for Mass Spectrometry of RNA-Binding Proteins during Liquid-Liquid Phase Separation Reveals Distinct Assembly Mechanisms and Droplet Architectures
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Solvent-Dependent Structural Dynamics in the Ultrafast Photodissociation Reaction of Triiodide Observed with Time-Resolved X-ray Solution Scattering

Nimmrich, Amke; Panman, Matthijs R.; Berntsson, Oskar; Biasin, Elisa et al.

Part of Journal of the American Chemical Society, p. 15754-15765, 2023

• DOI for Solvent-Dependent Structural Dynamics in the Ultrafast Photodissociation Reaction of Triiodide Observed with Time-Resolved X-ray Solution Scattering
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Spatial metabolomics platform combining mass spectrometry imaging and in-depth chemical characterization with capillary electrophoresis

Mavroudakis, Leonidas; Golubova, Anastasia; Lanekoff, Ingela

Part of Talanta, 2025

• DOI for Spatial metabolomics platform combining mass spectrometry imaging and in-depth chemical characterization with capillary electrophoresis
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Do non-coordinating polymers function as host materials for solid polymer electrolytes?: The case of PVdF-HFP

Hernández, Guiomar; Lee, Tian Khoon; Erdélyi, Máté; Brandell, Daniel et al.

Part of Journal of Materials Chemistry A, p. 15329-15335, 2023

• DOI for Do non-coordinating polymers function as host materials for solid polymer electrolytes?: The case of PVdF-HFP
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Identification and Imaging of Prostaglandin Isomers Utilizing MS³ Product Ions and Silver Cationization

Mavroudakis, Leonidas; Lanekoff, Ingela

Part of Journal of the American Society for Mass Spectrometry, p. 2341-2349, 2023

• DOI for Identification and Imaging of Prostaglandin Isomers Utilizing MS³ Product Ions and Silver Cationization
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Screening autism-associated environmental factors in differentiating human neural progenitors with fractional factorial design-based transcriptomics

Arora, Abishek; Becker, Martin; Marques-Santos, Cátia M.; Oksanen, Marika et al.

Part of Scientific Reports, 2023

• DOI for Screening autism-associated environmental factors in differentiating human neural progenitors with fractional factorial design-based transcriptomics
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Ion-to-Image, i2i, a Mass Spectrometry Imaging Data Analysis Platform for Continuous Ionization Techniques

Lillja, Johan; Duncan, Kyle D.; Lanekoff, Ingela

Part of Analytical Chemistry, p. 11589-11595, 2023

• DOI for Ion-to-Image, i2i, a Mass Spectrometry Imaging Data Analysis Platform for Continuous Ionization Techniques
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