Publications

Fibrillarin-dependent 2′-O-methylation modulates RPS28 ribosome incorporation and oncogenic translation

Groza, Paula; Kumari, Kanchan; Esteva-Socias, Margalida; Schott, Johanna et al.

Part of Cancer Letters, 2026

• DOI for Fibrillarin-dependent 2′-O-methylation modulates RPS28 ribosome incorporation and oncogenic translation
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Quantitative approaches for spatial metabolomics with isomer differentiation using surface sampling capillary electrophoresis mass spectrometry

Golubova, Anastasia; Lanekoff, Ingela

Part of Talanta, 2026

• DOI for Quantitative approaches for spatial metabolomics with isomer differentiation using surface sampling capillary electrophoresis mass spectrometry
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Spatial metabolomics platform combining mass spectrometry imaging and in-depth chemical characterization with capillary electrophoresis

Mavroudakis, Leonidas; Golubova, Anastasia; Lanekoff, Ingela

Part of Talanta, 2025

• DOI for Spatial metabolomics platform combining mass spectrometry imaging and in-depth chemical characterization with capillary electrophoresis
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Refolding of the Deinococcus Radiodurans phytochrome photosensory module and backbone resonance assignment by solution NMR

Vrhovac, Lidija; Levkovets, Maria; Orekhov, Vladislav; Westenhoff, Sebastian

Part of Protein Expression and Purification, 2025

• DOI for Refolding of the Deinococcus Radiodurans phytochrome photosensory module and backbone resonance assignment by solution NMR
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Spatial mapping of the AA-PGE₂-EP axis in multiple sclerosis lesions

Hansen, Cathrin E.; Konings, Julia; Toth, Gabor; Chornyi, Serhii et al.

Part of Acta Neuropathologica, 2025

• DOI for Spatial mapping of the AA-PGE₂-EP axis in multiple sclerosis lesions
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Dynamically chiral phosphonic acid-type metallo-β-lactamase inhibitors

Gulyás, Kinga; Zhou, Liping; Salamonsen, Daniel; Prester, Andreas et al.

Part of Communications Chemistry, 2025

• DOI for Dynamically chiral phosphonic acid-type metallo-β-lactamase inhibitors
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Flavonoids from the leaves of Monanthotaxis filipes modulate PCSK9 and LDLR

Mayeka, James G.; Atilaw, Yoseph; Shadrack, Daniel M.; Sarnyai, Farkas et al.

Part of Scientific African, 2025

• DOI for Flavonoids from the leaves of Monanthotaxis filipes modulate PCSK9 and LDLR
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Linker-Determined Folding and Hydrophobic Interactions Explain a Major Difference in PROTAC Cell Permeability

Poongavanam, Vasanthanathan; Peintner, Stefan; Abeje, Yordanos; Kölling, Florian et al.

Part of ACS Medicinal Chemistry Letters, p. 681-687, 2025

• DOI for Linker-Determined Folding and Hydrophobic Interactions Explain a Major Difference in PROTAC Cell Permeability
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Mapping effective microRNA pairing beyond the seed using abasic modifications

Kosek, David; Petzold, Katja; Andersson, Emma R.

Part of Nucleic Acids Research, 2025

• DOI for Mapping effective microRNA pairing beyond the seed using abasic modifications
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Click chemistry-based bioconjugation of iron oxide nanoparticles

Asad, Shno; Ahl, David; Suárez-López, Yael del Carmen; Erdélyi, Máté et al.

Part of Small, 2025

• DOI for Click chemistry-based bioconjugation of iron oxide nanoparticles
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Observation of early events in the photoactivation of Myxobacterial phytochrome using time-resolved serial femtosecond crystallography

Malla, Tek Narsingh; Aldama, Luis; Leon, Viridiana; Feliz, Denisse et al.

Part of Communications Chemistry, 2025

• DOI for Observation of early events in the photoactivation of Myxobacterial phytochrome using time-resolved serial femtosecond crystallography
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Multimodal mass spectrometry - Raman imaging reveals solvent dependent structural and chemical tissue alterations

Tóth, Gábor; Kryska, Adrianna; Sroka-Bartnicka, Anna; Lanekoff, Ingela

Part of Analytica Chimica Acta, 2025

• DOI for Multimodal mass spectrometry - Raman imaging reveals solvent dependent structural and chemical tissue alterations
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Non-Uniform Sampling for Quantitative NOESY

Darling, William T. P.; Hyberts, Sven G.; Erdélyi, Máté

Part of Magnetic Resonance in Chemistry, p. 495-507, 2025

• DOI for Non-Uniform Sampling for Quantitative NOESY
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Sequence, structure, and affinity of miR-34a binding sites determine repression efficacy

Sweetapple, Lara; Kosek, David; Banijamali, Elnaz; Becker, Walter et al.

Part of Nucleic Acids Research, 2025

• DOI for Sequence, structure, and affinity of miR-34a binding sites determine repression efficacy
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Standard Addition as a Method for Quantitative Mass Spectrometry Imaging

Davidová, Lucie; Lanekoff, Ingela

Part of Analytical Chemistry, p. 11572-11580, 2025

• DOI for Standard Addition as a Method for Quantitative Mass Spectrometry Imaging
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Cryo-EM exposes diverse polymorphism in IAPP mutants to guide the rational design of peptide-based therapeutics

Ooi, Saik Ann; Valli, Dylan; Kuska, Mikolaj I.; Mari, Helena et al.

Part of Journal of Molecular Biology, 2025

• DOI for Cryo-EM exposes diverse polymorphism in IAPP mutants to guide the rational design of peptide-based therapeutics
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Hydrogen Bond-Induced Binding between Organofluorine and Protein via Fluorine Atoms: A Database Survey and Quantum Chemistry Calculation Study

Han, Zijian; Li, Jintian; Liao, Qingyi; Luo, Ruitong et al.

Part of Journal of Medicinal Chemistry, p. 14882-14894, 2025

• DOI for Hydrogen Bond-Induced Binding between Organofluorine and Protein via Fluorine Atoms: A Database Survey and Quantum Chemistry Calculation Study

Bioactive 2-arylbenzofuran and chalcone derivatives from Morus mesozygia Stapf

Matundura, Jackson Obegi; Mollel, Jackson T.; Miah, Masum; Said, Joanna et al.

Part of Fitoterapia, 2025

• DOI for Bioactive 2-arylbenzofuran and chalcone derivatives from Morus mesozygia Stapf
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Ultrafast, remote-controlled protonation reaction enables structural changes in a phytochrome

Shankar, Madan Kumar; Grunewald, Lukas; Wahlgren, Weixiao Yuan; Stucki-Buchli, Brigitte et al.

Part of Science Advances, 2025

• DOI for Ultrafast, remote-controlled protonation reaction enables structural changes in a phytochrome
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Detection of a hybrid PrPfr state in the dark reversion of a bathy phytochrome indicates inter-dimer allostery

Prodhan, Sayan; Mészáros, Petra; Bódizs, Szabolcs; Zhou, Yalin et al.

Part of Physical Chemistry, Chemical Physics - PCCP, p. 20279-20287, 2025

• DOI for Detection of a hybrid PrPfr state in the dark reversion of a bathy phytochrome indicates inter-dimer allostery
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Chemical Mechanism of Allosteric and Asymmetric Dark Reversion in a Bacterial Phytochrome Uncovered by Cryo-EM

Bódizs, Szabolcs; Fischer, Anna-Lena M.; Cervenak, Miklós; Prodhan, Sayan et al.

Part of Journal of the American Chemical Society, p. 45701-45711, 2025

• DOI for Chemical Mechanism of Allosteric and Asymmetric Dark Reversion in a Bacterial Phytochrome Uncovered by Cryo-EM

A Base‐Mediated Rearrangement of the Benzylic 1,5‐Hexadipyridynyl Moiety

Remmerswaal, Wouter A.; Nguyen, Thai‐Tony; Han, Zijian; Krasovski Slobodian, Fedor et al.

Part of ChemPlusChem, 2025

• DOI for A Base‐Mediated Rearrangement of the Benzylic 1,5‐Hexadipyridynyl Moiety
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Time-resolved serial crystallography to reveal protein structural changes

Mészáros, Petra; Westenhoff, Sebastian

Part of Trends in Biochemical Sciences (TIBS), p. 183-184, 2024

• DOI for Time-resolved serial crystallography to reveal protein structural changes
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Exploring the chemical space of orally bioavailable PROTACs

Apprato, Giulia; Poongavanam, Vasanthanathan; Jimenez, Diego Garcia; Atilaw, Yoseph et al.

Part of Drug Discovery Today, 2024

• DOI for Exploring the chemical space of orally bioavailable PROTACs
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Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography

Cellini, Andrea; Shankar, Madan Kumar; Nimmrich, Amke; Hunt, Leigh Anna et al.

Part of Nature Chemistry, p. 624-632, 2024

• DOI for Directed ultrafast conformational changes accompany electron transfer in a photolyase as resolved by serial crystallography
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Bioactive abietenolide diterpenes from Suregada procera

Matundura, Jackson Obegi; Mollel, Jackson T.; Miah, Masum; Said, Joanna et al.

Part of Fitoterapia, 2024

• DOI for Bioactive abietenolide diterpenes from Suregada procera
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Antimicrobial Dihydroflavonols and Isoflavans Isolated from the Root Bark of Dalbergia gloveri

Kiganda, Ivan; Wieske, Lianne H. E.; Nchiozem-Ngnitedem, Vaderament-Alexe; Chalo, Duncan et al.

Part of Journal of Natural Products, p. 2263-2271, 2024

• DOI for Antimicrobial Dihydroflavonols and Isoflavans Isolated from the Root Bark of Dalbergia gloveri
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Elucidating the Binding Mode of Sulfur- and Selenium-Based Cationic Chalcogen-Bond Donors

Akbaba, Sercan; Steinke, Tim; Vogel, Lukas; Engelage, Elric et al.

Part of Chemistry - A European Journal, 2024

• DOI for Elucidating the Binding Mode of Sulfur- and Selenium-Based Cationic Chalcogen-Bond Donors
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Antiviral Rotenoids and Isoflavones Isolated from Millettia oblata ssp. teitensis

Kiganda, Ivan; Bogaerts, Jonathan; Wieske, Lianne H.E.; Deyou, Tsegaye et al.

Part of Journal of Natural Products, p. 1003-1012, 2024

• DOI for Antiviral Rotenoids and Isoflavones Isolated from Millettia oblata ssp. teitensis
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The Influence of Disulfide, Thioacetal and Lanthionine-Bridges on the Conformation of a Macrocyclic Peptide

Darling, William T. P.; Wieske, Hermina H. E.; Cook, Declan T.; Aliev, Abil E. et al.

Part of Chemistry - A European Journal, 2024

• DOI for The Influence of Disulfide, Thioacetal and Lanthionine-Bridges on the Conformation of a Macrocyclic Peptide
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Cryo-EM structures of a bathy phytochrome histidine kinase reveal a unique light-dependent activation mechanism

Bódizs, Szabolcs; Mészáros, Petra; Grunewald, Lukas; Takala, Heikki et al.

Part of Structure, p. 1952-1962000, 2024

• DOI for Cryo-EM structures of a bathy phytochrome histidine kinase reveal a unique light-dependent activation mechanism
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Online Direct Infusion Mass Spectrometry of Liquid-Liquid Extraction Phases for Metabolite and Lipid Profiling with the Direct Infusion Probe

Marques, Catia; Blaase, Lena; Lanekoff, Ingela

Part of Metabolites, 2024

• DOI for Online Direct Infusion Mass Spectrometry of Liquid-Liquid Extraction Phases for Metabolite and Lipid Profiling with the Direct Infusion Probe
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Taming Molecular Folding: Anion-Templated Foldamers with Tunable Quaternary Structures

John, Eric A.; Riel, Asia Marie S.; Wieske, Lianne H. E.; Ray, Debmalya et al.

Part of Journal of the American Chemical Society, p. 16419-16427, 2024

• DOI for Taming Molecular Folding: Anion-Templated Foldamers with Tunable Quaternary Structures

Elucidating microRNA-34a organisation within human Argonaute-2 by dynamic nuclear polarisation-enhanced magic angle spinning NMR

Dasgupta, Rubin; Becker, Walter; Petzold, Katja

Part of Nucleic Acids Research, p. 11995-12004, 2024

• DOI for Elucidating microRNA-34a organisation within human Argonaute-2 by dynamic nuclear polarisation-enhanced magic angle spinning NMR
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Fluorinated captopril analogues inhibit metallo-ll-lactamases and facilitate structure determination of NDM-1 binding pose

Kondratieva, Alexandra; Palica, Katarzyna; Frohlich, Christopher; Hovd, Rebekka Rolfsnes et al.

Part of European Journal of Medicinal Chemistry, 2024

• DOI for Fluorinated captopril analogues inhibit metallo-ll-lactamases and facilitate structure determination of NDM-1 binding pose
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Interleukin-13 Treatment of Living Lung Tissue Model Alters the Metabolome and Proteome: A Nano-DESI MS Metabolomics and Shotgun Proteomics Study

Tóth, Gábor; Golubova, Anastasia; Falk, Alexander; Bergström Lind, Sara et al.

Part of International Journal of Molecular Sciences, 2024

• DOI for Interleukin-13 Treatment of Living Lung Tissue Model Alters the Metabolome and Proteome: A Nano-DESI MS Metabolomics and Shotgun Proteomics Study
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Is Simultaneous Binding to DNA and Gyrase Important for the Antibacterial Activity of Cystobactamids?

Solga, Danny; Wieske, Hermina; Wilcox, Scott; Zeilinger, Carsten et al.

Part of Chemistry - A European Journal, 2024

• DOI for Is Simultaneous Binding to DNA and Gyrase Important for the Antibacterial Activity of Cystobactamids?
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Molecular chameleons in drug discovery

Poongavanam, Vasanthanathan; Wieske, Lianne H. E.; Peintner, Stefan; Erdélyi, Máté et al.

Part of Nature Reviews Chemistry, p. 45-60, 2024

• DOI for Molecular chameleons in drug discovery

Investigating Interaction Dynamics of an Enantioselective Peptide‐Catalyzed Acylation Reaction

Brauser, Matthias; Petzold, Katja; Thiele, Christina M.

Part of Angewandte Chemie International Edition, 2024

• DOI for Investigating Interaction Dynamics of an Enantioselective Peptide‐Catalyzed Acylation Reaction
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Optimising in-cell NMR acquisition for nucleic acids

Annecke, Henry T. P.; Eidelpes, Reiner; Feyrer, Hannes; Ilgen, Julian et al.

Part of Journal of Biomolecular NMR, p. 249-264, 2024

• DOI for Optimising in-cell NMR acquisition for nucleic acids
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Impact of Linker Composition on VHL PROTAC Cell Permeability

Abeje, Yordanos Esubalew; Wieske, Hermina H. E.; Poongavanam, Vasanthanathan; Maassen, Stefanie et al.

Part of Journal of Medicinal Chemistry, p. 638-657, 2024

• DOI for Impact of Linker Composition on VHL PROTAC Cell Permeability
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Unexpected effect of halogenation on the water solubility of small organic compounds

Zhang, Jianfang; Gulyás, Kinga Virág; Li, Jintian; Ma, Minfei et al.

Part of Computers in Biology and Medicine, 2024

• DOI for Unexpected effect of halogenation on the water solubility of small organic compounds

Microsecond time-resolved X-ray scattering by utilizing MHz repetition rate at second-generation XFELs

Konold, Patrick; Monrroy, Leonardo; Bellisario, Alfredo; de Matos Filipe, Diogo et al.

Part of Nature Methods, p. 1608-1611, 2024

• DOI for Microsecond time-resolved X-ray scattering by utilizing MHz repetition rate at second-generation XFELs
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Enhancing isomer specificity in mass spectrometry by combining silver ion adduction and ion mobility

Sharma, Varun V.; De Chavez, Danjo; Slade, Susan E.; Lanekoff, Ingela

Part of Talanta Open, 2024

• DOI for Enhancing isomer specificity in mass spectrometry by combining silver ion adduction and ion mobility
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Crotofolane Diterpenoids and Other Constituents Isolated from Croton kilwae

Mahambo, Emanuel T.; Uwamariya, Colores; Miah, Masum; Clementino, Leandro da Costa et al.

Part of Journal of Natural Products, p. 380-389, 2023

• DOI for Crotofolane Diterpenoids and Other Constituents Isolated from Croton kilwae
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Ground-state heterogeneity and vibrational energy redistribution in bacterial phytochrome observed with femtosecond 2D IR spectroscopy

Chenchiliyan, Manoop; Kuebel, Joachim; Ooi, Saik Ann; Salvadori, Giacomo et al.

Part of Journal of Chemical Physics, 2023

• DOI for Ground-state heterogeneity and vibrational energy redistribution in bacterial phytochrome observed with femtosecond 2D IR spectroscopy
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1-Phospha-Butadienes and 1H-Phospholes via Alkynylation of Acetylenic Phosphaalkenes

Shameem, Muhammad Anwar; Gupta, Arvind Kumar; Erdélyi, Máté; Orthaber, Andreas

Part of ChemPlusChem, 2023

• DOI for 1-Phospha-Butadienes and 1H-Phospholes via Alkynylation of Acetylenic Phosphaalkenes
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Surface sampling capillary electrophoresis–mass spectrometry for a direct chemical characterization of tissue and blood samples

Golubova, Anastasia; Lanekoff, Ingela

Part of Electrophoresis, p. 387-394, 2023

• DOI for Surface sampling capillary electrophoresis–mass spectrometry for a direct chemical characterization of tissue and blood samples
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Benzo[b]naphtho[2,1-d]furans and 2-Phenylnaphthalenes from Streblus usambarensis

Chepkirui, Carolyne; Ali Adem, Fozia; Rudenko, Anastasia; Gütlin, Yukino et al.

Part of Journal of Natural Products, p. 1010-1018, 2023

• DOI for Benzo[b]naphtho[2,1-d]furans and 2-Phenylnaphthalenes from Streblus usambarensis
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Ensemble determination by NMR data deconvolution

Wieske, Lianne H. E.; Peintner, Stefan; Erdélyi, Máté

Part of Nature Reviews Chemistry, p. 511-524, 2023

• DOI for Ensemble determination by NMR data deconvolution