Martin Dahlö
Bioinformatician at Department of Cell and Molecular Biology; NBIS - National Bioinformatics Infrastructure Sweden
- Mobile phone:
- +46 70 670 79 55
- E-mail:
- martin.dahlo@icm.uu.se
- Visiting address:
- Husargatan 3
75237 Uppsala - Postal address:
- Box 596
75124 Uppsala
Bioinformatician at Department of Information Technology; Uppsala Multidisciplinary Centre for Advanced Computational Science
- Mobile phone:
- +46 70 670 79 55
- E-mail:
- martin.dahlo@uppmax.uu.se
- Visiting address:
- Hus 10, Regementsvägen 10
- Postal address:
- Box 337
751 05 Uppsala

Publications
Selection of publications
Part of GigaScience, p. 1-10, 2013
- DOI for Lessons learned from implementing a national infrastructure in Sweden for storage and analysis of next-generation sequencing data
- Download full text (pdf) of Lessons learned from implementing a national infrastructure in Sweden for storage and analysis of next-generation sequencing data
The transcriptome of the adenovirus infected cell
Part of Virology, p. 115-128, 2012
Recent publications
Part of GigaScience, p. 1-14, 2021
- DOI for Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit
- Download full text (pdf) of Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit
Approaches for Distributing Large Scale Bioinformatic Analyses
2021
MaRe: Processing Big Data with application containers on Apache Spark
Part of GigaScience, 2020
- DOI for MaRe: Processing Big Data with application containers on Apache Spark
- Download full text (pdf) of MaRe: Processing Big Data with application containers on Apache Spark
SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines
Part of GigaScience, 2019
- DOI for SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines
- Download full text (pdf) of SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines
SciPipe - Turning Scientific Workflows into Computer Programs
Part of Computing in science & engineering (Print), p. 109-113, 2019
- DOI for SciPipe - Turning Scientific Workflows into Computer Programs
- Download full text (pdf) of SciPipe - Turning Scientific Workflows into Computer Programs
All publications
Articles in journal
Part of GigaScience, p. 1-14, 2021
- DOI for Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit
- Download full text (pdf) of Rapid development of cloud-native intelligent data pipelines for scientific data streams using the HASTE Toolkit
MaRe: Processing Big Data with application containers on Apache Spark
Part of GigaScience, 2020
- DOI for MaRe: Processing Big Data with application containers on Apache Spark
- Download full text (pdf) of MaRe: Processing Big Data with application containers on Apache Spark
SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines
Part of GigaScience, 2019
- DOI for SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines
- Download full text (pdf) of SciPipe: A workflow library for agile development of complex and dynamic bioinformatics pipelines
SciPipe - Turning Scientific Workflows into Computer Programs
Part of Computing in science & engineering (Print), p. 109-113, 2019
- DOI for SciPipe - Turning Scientific Workflows into Computer Programs
- Download full text (pdf) of SciPipe - Turning Scientific Workflows into Computer Programs
Part of GigaScience, 2018
- DOI for Tracking the NGS revolution: managing life science research on shared high-performance computing clusters
- Download full text (pdf) of Tracking the NGS revolution: managing life science research on shared high-performance computing clusters
Part of Journal of Hospital Infection, p. 256-261, 2017
Recommendations on e-infrastructures for next-generation sequencing
Part of GigaScience, 2016
BioImg.org: A catalog of virtual machine images for the life sciences
Part of Bioinformatics and Biology Insights, p. 125-128, 2015
Part of GigaScience, p. 1-10, 2013
- DOI for Lessons learned from implementing a national infrastructure in Sweden for storage and analysis of next-generation sequencing data
- Download full text (pdf) of Lessons learned from implementing a national infrastructure in Sweden for storage and analysis of next-generation sequencing data
The transcriptome of the adenovirus infected cell
Part of Virology, p. 115-128, 2012