Valentina Peona

Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes

Jayaprasad, Suvratha; Peona, Valentina; Ellerstrand, Simon J.; Rossini, Roberto et al.

Part of Molecular Ecology, 2024

• DOI for Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes
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Hybridization in birds-of-paradise: Widespread ancestral gene flow despite strong sexual selection in a lek-mating system

Blom, Mozes P. K.; Peona, Valentina; Prost, Stefan; Christidis, Les et al.

Part of iScience, 2024

• DOI for Hybridization in birds-of-paradise: Widespread ancestral gene flow despite strong sexual selection in a lek-mating system
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Teaching transposon classification as a means to crowd source the curation of repeat annotation: a tardigrade perspective

Peona, Valentina; Martelossi, Jacopo; Almojil, Dareen; Bocharkina, Julia et al.

Part of Mobile DNA, 2024

• DOI for Teaching transposon classification as a means to crowd source the curation of repeat annotation: a tardigrade perspective
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An annotated chromosome-scale reference genome for Eastern black-eared wheatear (Oenanthe melanoleuca)

Peona, Valentina; Palacios Gimenez, Octavio Manuel; Lutgen, Dave; Olsen, Remi Andre et al.

Part of G3, 2023

• DOI for An annotated chromosome-scale reference genome for Eastern black-eared wheatear (Oenanthe melanoleuca)
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Comparative analysis of bats and rodents' genomes suggests a relation between non-LTR retrotransposons, cancer incidence, and ageing

Ricci, Marco; Peona, Valentina; Boattini, Alessio; Taccioli, Cristian

Part of Scientific Reports, 2023

• DOI for Comparative analysis of bats and rodents' genomes suggests a relation between non-LTR retrotransposons, cancer incidence, and ageing
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Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes

Jayaprasad, Suvratha; Peona, Valentina; Ellerstrand, Simon J.; Rossini, Roberto et al.

Part of Molecular Ecology, 2024

• DOI for Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes
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Hybridization in birds-of-paradise: Widespread ancestral gene flow despite strong sexual selection in a lek-mating system

Blom, Mozes P. K.; Peona, Valentina; Prost, Stefan; Christidis, Les et al.

Part of iScience, 2024

• DOI for Hybridization in birds-of-paradise: Widespread ancestral gene flow despite strong sexual selection in a lek-mating system
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Teaching transposon classification as a means to crowd source the curation of repeat annotation: a tardigrade perspective

Peona, Valentina; Martelossi, Jacopo; Almojil, Dareen; Bocharkina, Julia et al.

Part of Mobile DNA, 2024

• DOI for Teaching transposon classification as a means to crowd source the curation of repeat annotation: a tardigrade perspective
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An annotated chromosome-scale reference genome for Eastern black-eared wheatear (Oenanthe melanoleuca)

Peona, Valentina; Palacios Gimenez, Octavio Manuel; Lutgen, Dave; Olsen, Remi Andre et al.

Part of G3, 2023

• DOI for An annotated chromosome-scale reference genome for Eastern black-eared wheatear (Oenanthe melanoleuca)
• Download full text (pdf) of An annotated chromosome-scale reference genome for Eastern black-eared wheatear (Oenanthe melanoleuca)

Comparative analysis of bats and rodents' genomes suggests a relation between non-LTR retrotransposons, cancer incidence, and ageing

Ricci, Marco; Peona, Valentina; Boattini, Alessio; Taccioli, Cristian

Part of Scientific Reports, 2023

• DOI for Comparative analysis of bats and rodents' genomes suggests a relation between non-LTR retrotransposons, cancer incidence, and ageing
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Satellite DNA evolution in Corvoidea inferred from short and long reads

Peona, Valentina; Kutschera, Verena E.; Blom, Mozes P. K.; Irestedt, Martin et al.

Part of Molecular Ecology, p. 1288-1305, 2023

• DOI for Satellite DNA evolution in Corvoidea inferred from short and long reads
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Recurrent chromosome reshuffling and the evolution of neo-sex chromosomes in parrots

Huang, Zhen; Furo, Ivanete De O.; Liu, Jing; Peona, Valentina et al.

Part of Nature Communications, 2022

• DOI for Recurrent chromosome reshuffling and the evolution of neo-sex chromosomes in parrots
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A beginner's guide to manual curation of transposable elements

Goubert, Clement; Craig, Rory J.; Bilat, Agustin F.; Peona, Valentina et al.

Part of Mobile DNA, 2022

• DOI for A beginner's guide to manual curation of transposable elements
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Transposon- and Genome Dynamics in the Fungal Genus Neurospora: Insights from Nearly Gapless Genome Assemblies

Nguyen, Diem; Peona, Valentina; Unneberg, Per; Suh, Alexander et al.

Part of Fungal Genetics Reports, 2022

• DOI for Transposon- and Genome Dynamics in the Fungal Genus Neurospora: Insights from Nearly Gapless Genome Assemblies
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Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird-of-paradise

Peona, Valentina; Blom, Mozes P. K.; Xu, Luohao; Burri, Reto et al.

Part of Molecular Ecology Resources, p. 263-286, 2021

• DOI for Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird-of-paradise
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Genetic Barriers to Historical Gene Flow between Cryptic Species of Alpine Bumblebees Revealed by Comparative Population Genomics

Christmas, Matthew; Jones, Julia C.; Olsson, Anna; Wallerman, Ola et al.

Part of Molecular biology and evolution, p. 3126-3143, 2021

• DOI for Genetic Barriers to Historical Gene Flow between Cryptic Species of Alpine Bumblebees Revealed by Comparative Population Genomics
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Digest: Population genomics reveals convergence toward melanism in different island populations

Robert, Alois; Peona, Valentina; Ottenburghs, Jente

Part of Evolution, p. 1582-1584, 2021

• DOI for Digest: Population genomics reveals convergence toward melanism in different island populations

The avian W chromosome is a refugium for endogenous retroviruses with likely effects on female-biased mutational load and genetic incompatibilities

Peona, Valentina; Palacios-Gimenez, Octavio M.; Blommaert, Julie; Liu, Jing et al.

Part of Philosophical Transactions of the Royal Society of London. Biological Sciences, 2021

• DOI for The avian W chromosome is a refugium for endogenous retroviruses with likely effects on female-biased mutational load and genetic incompatibilities
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Discovery and population genomics of structural variation in a songbird genus

Weissensteiner, Matthias H.; Bunikis, Ignas; Catalan, Ana; Francoijs, Kees-Jan et al.

Part of Nature Communications, 2020

• DOI for Discovery and population genomics of structural variation in a songbird genus
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The tuatara genome reveals ancient features of amniote evolution

Gemmell, Neil J.; Rutherford, Kim; Prost, Stefan; Tollis, Marc et al.

Part of Nature, p. 403-409, 2020

• DOI for The tuatara genome reveals ancient features of amniote evolution
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Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds

Xu, Luohao; Auer, Gabriel; Peona, Valentina; Suh, Alexander et al.

Part of Nature Ecology & Evolution, p. 834-844, 2019

• DOI for Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds

Impact of non-LTR retrotransposons in the differentiation and evolution of anatomically modern humans

Guichard, Etienne; Peona, Valentina; Tagliazucchi, Guidantonio Malagoli; Abitante, Lucia et al.

Part of Mobile DNA, 2018

• DOI for Impact of non-LTR retrotransposons in the differentiation and evolution of anatomically modern humans
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Transposable Elements Activity is Positively Related to Rate of Speciation in Mammals

Ricci, Marco; Peona, Valentina; Guichard, Etienne; Taccioli, Cristian et al.

Part of Journal of Molecular Evolution, p. 303-310, 2018

• DOI for Transposable Elements Activity is Positively Related to Rate of Speciation in Mammals
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How complete are "complete" genome assemblies?: An avian perspective

Peona, Valentina; Weissensteiner, Matthias; Suh, Alexander

Part of Molecular Ecology Resources, p. 1188-1195, 2018

• DOI for How complete are "complete" genome assemblies?: An avian perspective
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The exploration and evolution of the avian genomic dark matter

Peona, Valentina

2021

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The hidden structural variability in avian genomes

Peona, Valentina; Blom, Mozes P. K.; Frankl-Vilches, Carolina; Milá, Borja et al.

Satellite DNA evolution in Corvides inferred from short and long reads

Peona, Valentina; Kutschera, Verena E.; Blom, Mozes P. K.; Irestedt, Martin et al.