Natasa Sladoje

Let it shine: Autofluorescence of Papanicolaou-stain improves AI-based cytological oral cancer detection

Lian, Wenyi; Lindblad, Joakim; Runow Stark, Christina; Hirsch, Jan et al.

Part of Computers in Biology and Medicine, p. 1-14, 2025

• DOI for Let it shine: Autofluorescence of Papanicolaou-stain improves AI-based cytological oral cancer detection

Detection of Extremely Sparse Key Instances in Whole Slide Cytology Images via Self-supervised One-class Representation Learning

Chatterjee, Swarnadip; Göksel, Orcun; Sladoje, Nataša; Lindblad, Joakim

Part of Pattern Recognition, p. 408-421, 2024

• DOI for Detection of Extremely Sparse Key Instances in Whole Slide Cytology Images via Self-supervised One-class Representation Learning

Correlated multimodal imaging in life sciences: lessons learnt

Rudraiah, Pavitra Sokke; Camacho, Rafael; Fernandez-Rodriguez, Julia; Fixler, Dror et al.

Part of Frontiers in Biomaterials Science, 2024

• DOI for Correlated multimodal imaging in life sciences: lessons learnt
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Deep multiple instance learning versus conventional deep single instance learning for interpretable oral cancer detection

Koriakina, Nadezhda; Sladoje, Nataša; Basic, Vladimir; Lindblad, Joakim

Part of PLOS ONE, 2024

• DOI for Deep multiple instance learning versus conventional deep single instance learning for interpretable oral cancer detection
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Cross-modality sub-image retrieval using contrastive multimodal image representations

Breznik, Eva; Wetzer, Elisabeth; Lindblad, Joakim; Sladoje, Nataša

Part of Scientific Reports, 2024

• DOI for Cross-modality sub-image retrieval using contrastive multimodal image representations
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Let it shine: Autofluorescence of Papanicolaou-stain improves AI-based cytological oral cancer detection

Lian, Wenyi; Lindblad, Joakim; Runow Stark, Christina; Hirsch, Jan et al.

Part of Computers in Biology and Medicine, p. 1-14, 2025

• DOI for Let it shine: Autofluorescence of Papanicolaou-stain improves AI-based cytological oral cancer detection

Deep multiple instance learning versus conventional deep single instance learning for interpretable oral cancer detection

Koriakina, Nadezhda; Sladoje, Nataša; Basic, Vladimir; Lindblad, Joakim

Part of PLOS ONE, 2024

• DOI for Deep multiple instance learning versus conventional deep single instance learning for interpretable oral cancer detection
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Cross-modality sub-image retrieval using contrastive multimodal image representations

Breznik, Eva; Wetzer, Elisabeth; Lindblad, Joakim; Sladoje, Nataša

Part of Scientific Reports, 2024

• DOI for Cross-modality sub-image retrieval using contrastive multimodal image representations
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Automated detection, segmentation and measurement of major vessels and the trachea in CT pulmonary angiography

Kahraman, Ali T.; Fröding, Tomas; Toumpanakis, Dimitrios; Sladoje, Nataša et al.

Part of Scientific Reports, 2023

• DOI for Automated detection, segmentation and measurement of major vessels and the trachea in CT pulmonary angiography
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INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Nataša

Part of PLOS ONE, 2023

• DOI for INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
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Fast computation of mutual information in the frequency domain with applications to global multimodal image alignment

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

Part of Pattern Recognition Letters, p. 196-203, 2022

• DOI for Fast computation of mutual information in the frequency domain with applications to global multimodal image alignment
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Is image-to-image translation the panacea for multimodal image registration?: A comparative study

Lu, Jiahao; Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Nataša

Part of PLOS ONE, 2022

• DOI for Is image-to-image translation the panacea for multimodal image registration?: A comparative study
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BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows.

Rubens, Ulysse; Mormont, Romain; Paavolainen, Lassi; Bäcker, Volker et al.

Part of Patterns (New York, N.Y.), 2020

• DOI for BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows.
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HISTOBREAST: a collection of brightfield microscopy images of Haematoxylin and Eosin stained breast tissue

Buga, Roxana M.; Totu, Tiberiu; Dumitru, Adrian; Costache, Mariana et al.

Part of Scientific Data, 2020

• DOI for HISTOBREAST: a collection of brightfield microscopy images of Haematoxylin and Eosin stained breast tissue
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Stochastic Distance Transform: Theory, Algorithms and Applications

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

Part of Journal of Mathematical Imaging and Vision, p. 751-769, 2020

• DOI for Stochastic Distance Transform: Theory, Algorithms and Applications
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Generalised deep learning framework for HEp-2 cell recognition using local binary pattern maps

Bajic, Buda; Majtner, Tomas; Lindblad, Joakim; Sladoje, Natasa

Part of IET Image Processing, p. 1201-1208, 2020

• DOI for Generalised deep learning framework for HEp-2 cell recognition using local binary pattern maps

Sparsity promoting super-resolution coverage segmentation by linear unmixing in presence of blur and noise

Bajic, Buda; Lindblad, Joakim; Sladoje, Natasa

Part of Journal of Electronic Imaging (JEI), 2019

• DOI for Sparsity promoting super-resolution coverage segmentation by linear unmixing in presence of blur and noise

Fast and Robust Symmetric Image Registration Based on Distances Combining Intensity and Spatial Information

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

Part of IEEE Transactions on Image Processing, p. 3584-3597, 2019

• DOI for Fast and Robust Symmetric Image Registration Based on Distances Combining Intensity and Spatial Information
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Facilitating Ultrastructural Pathology through Automated Imaging and Analysis

Sintorn, Ida-Maria; Suveer, Amit; Dragomir, Anca; Hultenby, Kjell et al.

Part of Journal of Pathology Informatics, p. 38-39, 2019

An Objective Scoring Framework for Histology Slide Image Mosaics Applicable for the Reliable Benchmarking of Image Quality Assessment Algorithms

Totu, Tiberiu; Buga, Roxana; Dumitru, Adrian; Costache, Mariana et al.

Part of IEEE Access, p. 53080-53091, 2018

• DOI for An Objective Scoring Framework for Histology Slide Image Mosaics Applicable for the Reliable Benchmarking of Image Quality Assessment Algorithms

Estimation of Feret's diameter from pixel coverage representation of a shape

Drazic, Slobodan; Sladoje, Natasa; Lindblad, Joakim

Part of Pattern Recognition Letters, p. 37-45, 2016

• DOI for Estimation of Feret's diameter from pixel coverage representation of a shape

Restoration of images degraded by signal-dependent noise based on energy minimization: an empirical study

Bajic, Buda; Lindblad, Joakim; Sladoje, Nataša

Part of Journal of Electronic Imaging (JEI), 2016

• DOI for Restoration of images degraded by signal-dependent noise based on energy minimization: an empirical study
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Estimation of linear deformations of 2D and 3D fuzzy objects

Tanács, Attila; Lindblad, Joakim; Sladoje, Nataša; Kato, Zoltan

Part of Pattern Recognition, p. 1391-1403, 2015

• DOI for Estimation of linear deformations of 2D and 3D fuzzy objects

Precise Euclidean distance transforms in 3D from voxel coverage representation

Ilic, Vladimir; Lindblad, Joakim; Sladoje, Natasa

Part of Pattern Recognition Letters, p. 184-191, 2015

• DOI for Precise Euclidean distance transforms in 3D from voxel coverage representation

Linear time distances between fuzzy sets with applications to pattern matching and classification

Lindblad, Joakim; Sladoje, Natasa

Part of IEEE Transactions on Image Processing, p. 126-136, 2014

• DOI for Linear time distances between fuzzy sets with applications to pattern matching and classification

A new set distance and its application to shape registration

Curic, Vladimir; Lindblad, Joakim; Sladoje, Natasa; Sarve, Hamid et al.

Part of Pattern Analysis and Applications, p. 141-152, 2014

• DOI for A new set distance and its application to shape registration

Coverage segmentation based on linear unmixing and minimization of perimeter and boundary thickness

Lindblad, Joakim; Sladoje, Natasa

Part of Pattern Recognition Letters, p. 728-738, 2012

• DOI for Coverage segmentation based on linear unmixing and minimization of perimeter and boundary thickness

Defuzzification of spatial fuzzy sets by feature distance minimization

Sladoje, Natasa; Lindblad, Joakim; Nyström, Ingela

Part of Image and Vision Computing, p. 127-141, 2011

• DOI for Defuzzification of spatial fuzzy sets by feature distance minimization

Regularized image denoising based on spectral gradient optimization

Lukic, Tibor; Lindblad, Joakim; Sladoje, Natasa

Part of Inverse Problems, 2011

• DOI for Regularized image denoising based on spectral gradient optimization

A Graph-based Framework for Sub-pixel Image Segmentation

Malmberg, Filip; Lindblad, Joakim; Sladoje, Natasa; Nyström, Ingela

Part of Theoretical Computer Science, p. 1338-1349, 2011

• DOI for A Graph-based Framework for Sub-pixel Image Segmentation

High-precision boundary length estimation by utilizing gray-level information

Sladoje, Natasa; Lindblad, Joakim

Part of IEEE Transactions on Pattern Analysis and Machine Intelligence, p. 357-363, 2009

• DOI for High-precision boundary length estimation by utilizing gray-level information

Representation and Reconstruction of Fuzzy Disks by Moments

Sladoje, Natasa; Lindblad, Joakim

Part of Fuzzy sets and systems (Print), p. 517-534, 2007

• DOI for Representation and Reconstruction of Fuzzy Disks by Moments

Measurements of digitized objects with fuzzy borders in 2D and 3D

Sladoje, Natasa; Nyström, Ingela; Saha, Punam Kumar

Part of Image and Vision Computing, p. 123-132, 2005

• DOI for Measurements of digitized objects with fuzzy borders in 2D and 3D

Shape signaturs of fuzzy star-shaped sets based on distance from the centroid

Chanussot, Jocelyn; Nyström, Ingela; Sladoje, Natasa

Part of Pattern Recognition Letters, p. 735-746, 2005

• DOI for Shape signaturs of fuzzy star-shaped sets based on distance from the centroid

Efficiency of Characterizing Ellipses and Ellipsoids by Discrete Moments

Zunic, Jovisa; Sladoje, Nataša

Part of IEEE Transactions on Pattern Analysis and Machine Intelligence, p. 407-414, 2000

• DOI for Efficiency of Characterizing Ellipses and Ellipsoids by Discrete Moments

Correlated multimodal imaging in life sciences: lessons learnt

Rudraiah, Pavitra Sokke; Camacho, Rafael; Fernandez-Rodriguez, Julia; Fixler, Dror et al.

Part of Frontiers in Biomaterials Science, 2024

• DOI for Correlated multimodal imaging in life sciences: lessons learnt
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Computer-assisted analysis of multimodal image data—perspectives and conclusion

Sladoje, Natasa; Lindblad, Joakim; Paul-Gilloteaux, Perrine

Part of Imaging Modalities for Biological and Preclinical Research, Institute of Physics Publishing (IOPP), 2021

• DOI for Computer-assisted analysis of multimodal image data—perspectives and conclusion

Introduction—computer-assisted analysis of multimodal image data

Sladoje, Natasa; Lindblad, Joakim

Part of Imaging Modalities for Biological and Preclinical Research, Institute of Physics Publishing (IOPP), 2021

• DOI for Introduction—computer-assisted analysis of multimodal image data

The coverage model and its use in image processing

Sladoje, Natasa; Lindblad, Joakim

Part of Selected Topics on Image Processing and Cryptology, p. 39-117, Mathematical Institute of the Serbian Academy of Sciences and Arts, 2012

Bioimage Data Analysis Workflows ‒ Advanced Components and Methods

Sladoje, Nataša; Miura, Kota

Springer, 2022

• DOI for Bioimage Data Analysis Workflows ‒ Advanced Components and Methods

Discrete Geometry and Mathematical Morphology: First International Joint Conference, DGMM 2021, Uppsala, Sweden, May 24–27, 2021, Proceedings

Lindblad, Joakim; Malmberg, Filip; Sladoje, Natasa

Springer, 2021

• DOI for Discrete Geometry and Mathematical Morphology: First International Joint Conference, DGMM 2021, Uppsala, Sweden, May 24–27, 2021, Proceedings

Bioimage Data Analysis Workflows

Miura, Kota; Sladoje, Natasa

Springer, 2019

• DOI for Bioimage Data Analysis Workflows
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Detection of Extremely Sparse Key Instances in Whole Slide Cytology Images via Self-supervised One-class Representation Learning

Chatterjee, Swarnadip; Göksel, Orcun; Sladoje, Nataša; Lindblad, Joakim

Part of Pattern Recognition, p. 408-421, 2024

• DOI for Detection of Extremely Sparse Key Instances in Whole Slide Cytology Images via Self-supervised One-class Representation Learning

Are We Friends: End-to-End Prediction of Child Rapport in Guided Play

Fraile, Marc; Varni, Giovanna; Lindblad, Joakim; Sladoje, Nataša et al.

2024

Can Representation Learning for Multimodal Image Registration be Improved by Supervision of Intermediate Layers?

Wetzer, Elisabeth; Lindblad, Joakim; Sladoje, Nataša

Part of IbPRIA 2023: Pattern Recognition and Image Analysis, p. 261-275, 2023

• DOI for Can Representation Learning for Multimodal Image Registration be Improved by Supervision of Intermediate Layers?

Partial dimensional collapse in contrastive learning when using intermediate layers

Wetzer, Elisabeth; Lindblad, Joakim; Sladoje, Nataša

2023

Investigating the Relevance of Contextual Information Towards Improving Deep CNN Based Oral Cancer Screening on Whole Slide Cytology Samples

Chatterjee, Swarnadip; Sladoje, Nataša; Lindblad, Joakim

2023

Contrastive Learning of Equivariant Image Representations for Multimodal Deformable Registration

Nordling, Love; Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Nataša

Part of 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 2023

• DOI for Contrastive Learning of Equivariant Image Representations for Multimodal Deformable Registration

Multimodal deformable image registration using contrastive learning of equivariant image representations

Nordling, Love; Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Nataša

2023

Cross-Sim-NGF: FFT-Based Global Rigid Multimodal Alignment of Image Volumes using Normalized Gradient Fields

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

2022

• DOI for Cross-Sim-NGF: FFT-Based Global Rigid Multimodal Alignment of Image Volumes using Normalized Gradient Fields

Rotationally Equivariant Representation Learning for Multimodal Images

Wetzer, Elisabeth; Pielawski, Nicolas; Öfverstedt, Johan; Lu, Jiahao et al.

2022

DCNN based Oral Cancer Screening using Whole Slide Cytology Images: Effect of Increased Patch Size

Chatterjee, Swarnadip; Sladoje, Nataša; Lindblad, Joakim

2022

Re-Ranking Strategies in Cross-Modality Microscopy Retrieval

Wetzer, Elisabeth; Breznik, Eva; Lindblad, Joakim; Sladoje, Nataša

2022

Efficient Algorithms for Global Multimodal Image Registration

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

2022

Label-Free Reverse Image Search of Multimodal Microscopy Images

Breznik, Eva; Wetzer, Elisabeth; Lindblad, Joakim; Sladoje, Natasa

2022

End-to-End Learning and Analysis of Infant Engagement During Guided Play: Prediction and Explainability

Fraile, Marc; Fawcett, Christine; Lindblad, Joakim; Sladoje, Nataša et al.

Part of ICMI '22, p. 444-454, 2022

• DOI for End-to-End Learning and Analysis of Infant Engagement During Guided Play: Prediction and Explainability
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End-to-end Multiple Instance Learning with Gradient Accumulation

Andersson, Axel; Koriakina, Nadezhda; Sladoje, Nataša; Lindblad, Joakim

Part of 2022 IEEE International Conference on Big Data (Big Data), p. 2742-2746, 2022

• DOI for End-to-end Multiple Instance Learning with Gradient Accumulation

Automatic Analysis of Infant Engagement during Play: An End-to-end Learning and Explainable AI Pilot Experiment

Fraile, Marc; Lindblad, Joakim; Fawcett, Christine; Sladoje, Natasa et al.

Part of Companion Publication of the 2021 International Conference on Multimodal Interaction, p. 403-407, 2021

• DOI for Automatic Analysis of Infant Engagement during Play: An End-to-end Learning and Explainable AI Pilot Experiment
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The Effect of Within-Bag Sampling on End-to-End Multiple Instance Learning

Koriakina, Nadezhda; Sladoje, Natasa; Lindblad, Joakim

Part of Proceedings of the 12th International Symposium on Image and Signal Processing and Analysis (ISPA), p. 183-188, 2021

• DOI for The Effect of Within-Bag Sampling on End-to-End Multiple Instance Learning

Contrastive Learning for Equivariant Multimodal Image Representations

Wetzer, Elisabeth; Pielawski, Nicolas; Breznik, Eva; Öfverstedt, Johan et al.

2021

Registration of Multimodal Microscopy Images using CoMIR – learned structural image representations

Wetzer, Elisabeth; Pielawski, Nicolas; Öfverstedt, Johan; Lu, Jiahao et al.

2021

Fast Computation of Mutual Information with Application to Global Multimodal Image Alignment of Micrographs

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

2021

Image-to-Image Translation in Multimodal Image Registration: How Well Does It Work?

Lu, Jiahao; Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

2021

Comir: Contrastive multimodal image representation for registration

Wetzer, Elisabeth; Pielawski, Nicolas; Öfverstedt, Johan; Lu, Jiahao et al.

2021

When texture matters: Texture-focused CNNs outperform general data augmentation and pretraining in oral cancer detection

Wetzer, Elisabeth; Gay, Jo; Harlin, Hugo; Lindblad, Joakim et al.

Part of 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), p. 517-521, 2020

• DOI for When texture matters: Texture-focused CNNs outperform general data augmentation and pretraining in oral cancer detection

A Deep Learning Based Pipeline for Efficient Oral Cancer Screening on Whole Slide Images

Lu, Jiahao; Sladoje, Natasa; Runow Stark, Christina; Darai Ramqvist, Eva et al.

Part of Image Analysis and Recognition, p. 249-261, 2020

• DOI for A Deep Learning Based Pipeline for Efficient Oral Cancer Screening on Whole Slide Images

Cross-modal Representation Learning for Efficient Registration of Multiphoton and Brightfield Microscopy Images of Skin Tissue

Wetzer, Elisabeth; Pielawski, Nicolas; Öfverstedt, Johan; Jiahao, Lu et al.

Part of 4th NEUBIAS Conference, Bordeaux, France, 2020

CoMIR: Contrastive Multimodal Image Representation for Registration

Pielawski, Nicolas; Wetzer, Elisabeth; Öfverstedt, Johan; Lu, Jiahao et al.

Part of NeurIPS - 34th Conference on Neural Information Processing Systems, 2020

Uncovering hidden reasoning of convolutional neural networks in biomedical image classification by using attribution methods

Koriakina, Nadezhda; Sladoje, Natasa; Wetzer, Elisabeth; Lindblad, Joakim

Part of 4th NEUBIAS Conference, Bordeaux, France, 2020

On the Effectiveness of Generative Adversarial Networks as HEp-2 Image Augmentation Tool

Majtner, Tomáš; Bajić, Buda; Lindblad, Joakim; Sladoje, Natasa et al.

Part of Scandinavian Conference on Image Analysis, p. 439-451, 2019

• DOI for On the Effectiveness of Generative Adversarial Networks as HEp-2 Image Augmentation Tool

Towards automated multiscale Glomeruli detection and analysis in TEM by fusion of CNN and LBP maps

Wetzer, Elisabeth; Lindblad, Joakim; Sintorn, Ida-Maria; Hultenby, Kjell et al.

Part of 3rd NEUBIAS Conference, 2019

Towards automated multiscale imaging and analysis in TEM: Glomerulus detection by fusion of CNN and LBP maps

Wetzer, Elisabeth; Lindblad, Joakim; Sintorn, Ida-Maria; Hultenby, Kjell et al.

Part of Computer Vision, p. 465-475, 2019

• DOI for Towards automated multiscale imaging and analysis in TEM: Glomerulus detection by fusion of CNN and LBP maps

Robust Symmetric Affine Image Registration

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

Part of Swedish Symposium on Image Analysis, 2019

Visualization of convolutional neural network class activations in automated oral cancer detection for interpretation of malignancy associated changes

Koriakina, Nadezhda; Sladoje, Natasa; Bengtsson, Ewert; Ramqvist, Eva Darai et al.

Part of 3rd NEUBIAS Conference, Luxembourg, 2-8 February 2019, 2019

Oral Cancer Detection: A Comparison of Texture Focused Deep Learning Approaches

Gay, Jo; Harlin, Hugo; Wetzer, Elisabeth; Lindblad, Joakim et al.

Part of Proceedings of the Swedish Society for Automated Image Analysis (SSBA), 2019

Stochastic Distance Functions with Applications in Object Detection and Image Segmentation

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

Part of Swedish Symposium on Image Analysis, 2019

Stochastic Distance Transform

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

Part of Discrete Geometry for Computer Imagery, p. 75-86, 2019

• DOI for Stochastic Distance Transform

Texture-based oral cancer detection: A performance analysis of deep learning approaches.

Gay, Jo; Harlin, Hugo; Wetzer, Elisabeth; Lindblad, Joakim et al.

Part of 3rd NEUBIAS Conference, 2019

Towards automated multiscale imaging and analysis in TEM: Glomeruli detection by fusion of CNN and LBP maps

Wetzer, Elisabeth; Lindblad, Joakim; Sintorn, Ida-Maria; Hultenby, Kjell et al.

Part of Swedish Symposium on Deep Learning, 2018

Denoising of Short Exposure Transmission Electron Microscopy Images using CNN

Gupta, Anindya; Suveer, Amit; Bajic, Buda; Pepic, Ivana et al.

Part of Swedish Symposium on Image Analysis, 2018

Denoising of short exposure transmission electron microscopy images for ultrastructural enhancement

Bajic, Buda; Suveer, Amit; Gupta, Anindya; Pepic, Ivana et al.

Part of Proc. 15th International Symposium on Biomedical Imaging, p. 921-925, 2018

• DOI for Denoising of short exposure transmission electron microscopy images for ultrastructural enhancement

Distance Between Vector-valued Images based on Intersection Decomposition with Applications in Object Detection

Öfverstedt, Johan; Sladoje, Natasa; Lindblad, Joakim

Part of Swedish Symposium on Image Analysis, 2018

Enhancement of cilia sub-structures by multiple instance registration and super-resolution reconstruction

Suveer, Amit; Sladoje, Nataša; Lindblad, Joakim; Dragomir, Anca et al.

Part of Image Analysis, p. 362-374, 2017

• DOI for Enhancement of cilia sub-structures by multiple instance registration and super-resolution reconstruction

Cilia ultrastructural visibility enhancement by multiple instance registration and super-resolution reconstruction

Suveer, Amit; Sladoje, Natasa; Lindblad, Joakim; Dragomir, Anca et al.

Part of Swedish Symposium on Image Analysis, 2017

False positive reduction of cilia detected in low resolution TEM images using a convolutional neural network

Gupta, Anindya; Suveer, Amit; Lindblad, Joakim; Dragomir, Anca et al.

Part of Swedish Symposium on Image Analysis, 2017

• Download full text (pdf) of False positive reduction of cilia detected in low resolution TEM images using a convolutional neural network

Distance between vector-valued fuzzy sets based on intersection decomposition with applications in object detection

Öfverstedt, Johan; Sladoje, Natasa; Lindblad, Joakim

Part of Mathematical Morphology and its Applications to Signal and Image Processing, p. 395-407, 2017

• DOI for Distance between vector-valued fuzzy sets based on intersection decomposition with applications in object detection

Convolutional neural networks for false positive reduction of automatically detected cilia in low magnification TEM images

Gupta, Anindya; Suveer, Amit; Lindblad, Joakim; Dragomir, Anca et al.

Part of Image Analysis, p. 407-418, 2017

• DOI for Convolutional neural networks for false positive reduction of automatically detected cilia in low magnification TEM images

Distance Between Vector-Valued Representations of Objects in Images with Application in Object Detection and Classification

Sladoje, Natasa; Lindblad, Joakim

Part of In Proc. of the 18th International Workshop on Combinatorial Image Analysis, IWCIA2017, p. 243-255, 2017

• DOI for Distance Between Vector-Valued Representations of Objects in Images with Application in Object Detection and Classification

Blind deconvolution of images degraded with mixed Poisson-Gaussian noise with application in Transmission Electron Microscopy

Bajic, Buda; Lindblad, Joakim; Sladoje, Nataša

Part of Proceedings of the Swedish Society for Automated Image Analysis, p. 137-141, 2016

Single image super-resolution reconstruction in presence of mixed Poisson-Gaussian noise

Bajic, Buda; Lindblad, Joakim; Sladoje, Natasa

Part of 2016 SIXTH INTERNATIONAL CONFERENCE ON IMAGE PROCESSING THEORY, TOOLS AND APPLICATIONS (IPTA), 2016

• DOI for Single image super-resolution reconstruction in presence of mixed Poisson-Gaussian noise

Automated detection of cilia in low magnification transmission electron microscopy images using template matching

Suveer, Amit; Sladoje, Nataša; Lindblad, Joakim; Dragomir, Anca et al.

Part of Biomedical Imaging (ISBI), 2016 IEEE 13th International Symposium on, p. 386-390, 2016

• DOI for Automated detection of cilia in low magnification transmission electron microscopy images using template matching

Blind restoration of images degraded with mixed poisson-Gaussian noise with application in transmission electron microscopy

Bajic, Buda; Lindblad, Joakim; Sladoje, Nataša

Part of 2016 Ieee 13Th International Symposium On Biomedical Imaging (ISBI), p. 123-127, 2016

• DOI for Blind restoration of images degraded with mixed poisson-Gaussian noise with application in transmission electron microscopy

Signature of a Shape Based on Its Pixel Coverage Representation

Ilic, Vladimir; Lindblad, Joakim; Sladoje, Nataša

Part of Discrete Geometry for Computer Imagery, DGCI 2016. Lecture Notes in Computer Science, Vol. 9647, pp. 181-193, Springer 2016, p. 181-193, 2016

• DOI for Signature of a Shape Based on Its Pixel Coverage Representation

Coverage segmentation of 3D thin structures

Lidayová, Kristína; Lindblad, Joakim; Sladoje, Nataša; Frimmel, Hans et al.

Part of Proc. 5th International Conference on Image Processing Theory, Tools and Applications, p. 23-28, 2015

• DOI for Coverage segmentation of 3D thin structures

High-resolution reconstruction by feature distance minimization from multiple views of an object

Lindblad, Joakim; Sladoje, Natasa; Suveer, Amit; Dragomir, Anca et al.

Part of Proc. 5th International Conference on Image Processing Theory, Tools and Applications, p. 29-34, 2015

• DOI for High-resolution reconstruction by feature distance minimization from multiple views of an object

Microscopy image enhancement for cost-effective cervical cancer screening

Lindblad, Joakim; Bengtsson, Ewert; Sladoje, Nataša

Part of Image Analysis, p. 440-451, 2015

• DOI for Microscopy image enhancement for cost-effective cervical cancer screening

αLBP – a novel member of the Local Binary Pattern family based on α-cutting

Delic, Marija; Lindblad, Joakim; Sladoje, Natasa

Part of Proc. 9th International Symposium on Image and Signal Processing and Analysis, p. 13-18, 2015

• DOI for αLBP – a novel member of the Local Binary Pattern family based on α-cutting

Exact linear time Euclidean distance transforms of grid line sampled shapes

Lindblad, Joakim; Sladoje, Natasa

Part of Mathematical Morphology and its Applications to Signal and Image Processing, p. 645-656, 2015

• DOI for Exact linear time Euclidean distance transforms of grid line sampled shapes

Optimizing optics and imaging for pattern recognition based screening tasks

Lindblad, Joakim; Sladoje, Natasa; Malm, Patrik; Bengtsson, Ewert et al.

Part of Proc. 22nd International Conference on Pattern Recognition, p. 3333-3338, 2014

• DOI for Optimizing optics and imaging for pattern recognition based screening tasks

An evaluation of potential functions for regularized image deblurring

Bajić, Buda; Lindblad, Joakim; Sladoje, Nataša

Part of Image Analysis and Recognition, p. 150-158, 2014

• DOI for An evaluation of potential functions for regularized image deblurring

Coverage segmentation of thin structures by linear unmixing and local centre of gravity attraction

Lidayová, Kristína; Lindblad, Joakim; Sladoje, Nataša; Frimmel, Hans

Part of Proc. 8th International Symposium on Image and Signal Processing and Analysis, p. 83-88, 2013

• DOI for Coverage segmentation of thin structures by linear unmixing and local centre of gravity attraction

Distance measures between digital fuzzy objects and their applicability in image processing

Curic, Vladimir; Lindblad, Joakim; Sladoje, Natasa

Part of Combinatorial Image Analysis, p. 385-397, 2011

• DOI for Distance measures between digital fuzzy objects and their applicability in image processing

Precise Estimation of the Projection of a Shape from a Pixel Coverage Representation

Dražić, Slobodan; Lindblad, Joakim; Sladoje, Natasa

Part of Proceedings of the 7th IEEE International Symposium on Image and Signal Processing and Analysis (ISPA), p. 569-574, 2011

De-noising of SRµCT Fiber Images by Total Variation Minimization

Lindblad, Joakim; Sladoje, Natasa; Lukic, Tibor

Part of Proceedings of the 20th International Conference on Pattern Recognition (ICPR10), p. 4621-4624, 2010

• DOI for De-noising of SRµCT Fiber Images by Total Variation Minimization

The Sum of minimal distances as a useful distance measure for image registration

Curic, Vladimir; Lindblad, Joakim; Sladoje, Natasa

Part of Proceedings SSBA 2010, p. 55-58, 2010

Estimation of linear deformations of 3D objects

Tanács, Attila; Lindblad, Joakim; Sladoje, Natasa; Kato, Zoltan

Part of Proceedings of 2010 IEEE 17th International Conference on Image Processing, p. 153-156, 2010

• DOI for Estimation of linear deformations of 3D objects

Pixel Coverage Segmentation for Improved Feature Estimation

Sladoje, Natasa; Lindblad, Joakim

Part of 15th International Conference on Image Analysis and Processing, p. 929-938, 2009

• DOI for Pixel Coverage Segmentation for Improved Feature Estimation

Recovering Affine Deformations of Fuzzy Shapes

Tanács, Attila; Domokos, Csaba; Sladoje, Natasa; Lindblad, Joakim et al.

Part of 16th Scandinavian Conference on Image Analysis, p. 735-744, 2009

• DOI for Recovering Affine Deformations of Fuzzy Shapes

On set distances and their application to image registration

Lindblad, Joakim; Curic, Vladimir; Sladoje, Natasa

Part of Proc. 6th International Symposium on Image and Signal Processing and Analysis, p. 449-454, 2009

• DOI for On set distances and their application to image registration

Improved Quantification of Bone Remodelling by Utilizing Fuzzy Based Segmentation

Lindblad, Joakim; Sladoje, Natasa; Curic, Vladimir; Sarve, Hamid et al.

Part of Image Analysis, p. 750-759, 2009

• DOI for Improved Quantification of Bone Remodelling by Utilizing Fuzzy Based Segmentation

Deterministic Defuzzification based on Spectral Projected Gradient Optimization

Lukic, Tibor; Sladoje, Natasa; Lindblad, Joakim

Part of 30th Symposium of the German Association for Pattern Recognition (DAGM), p. 476-485, 2008

• DOI for Deterministic Defuzzification based on Spectral Projected Gradient Optimization

Defuzzification by Feature Distance Minimization Based on DC Programming

Lindblad, Joakim; Lukic, Tibor; Sladoje, Natasa

Part of 5th International Symposium on Image and Signal Processing and Analysis, 2007, p. 373-378, 2007

• DOI for Defuzzification by Feature Distance Minimization Based on DC Programming

Feature Based Defuzzification at Increased Spatial Resolution

Lindblad, Joakim; Sladoje, Natasa

Part of Combinatorial Image Analysis, p. 131-143, 2006

• DOI for Feature Based Defuzzification at Increased Spatial Resolution

Feature Based Defuzzification in Z² and Z³ Using a Scale Space Approach

Lindblad, Joakim; Sladoje, Natasa; Lukic, Tibor

Part of Discrete Geometry for Computer Imagery 13th International Conference, DGCI 2006, Szeged, Hungary, October 25-27, 2006. Proceedings, p. 379-390, 2006

• DOI for Feature Based Defuzzification in Z² and Z³ Using a Scale Space Approach

Estimation of moments of digitized objects with fuzzy borders

Sladoje, Natasa; Lindblad, Joakim

Part of Proc. of 13th International Conference on Image Analysis and Processing, p. 188-195, 2005

• DOI for Estimation of moments of digitized objects with fuzzy borders

Defuzzification of discrete objects by optimizing area and perimeter similarity

Sladoje, Natasa; Lindblad, Joakim; Nyström, Ingela

Part of Proceedings of International Conference on Pattern Recognition (ICPR 2004), p. 526-629, 2004

• DOI for Defuzzification of discrete objects by optimizing area and perimeter similarity

Shape Description of Fuzzy Segmented Objects: Area and Perimeter Estimators

Sladoje, Natasa; Nyström, Ingela; Saha, Punam K.

Part of Proceedings of SSAB (Swedish Society for Automated Image Analysis) Symposium on Image Analysis, Stockholm, Sweden, p. 17-20, 2003

Perimeter and Area Estimations of Digitized Objects with Fuzzy Borders

Sladoje, Natasa; Nyström, Ingela; Saha, Punam K.

Part of Proceedings of 11th International Conference on Discrete Geometry for Computer Imagery (DGCI 2003), p. 368-377, 2003

• DOI for Perimeter and Area Estimations of Digitized Objects with Fuzzy Borders

Measuring perimeter and area in low resolution images using a fuzzy approach

Sladoje, Natasa; Nyström, Ingela; Saha, Punam K.

Part of Proceedings of 13th Scandinavian Conference on Image Analysis (SCIA 2003), p. 853-860, 2003

• DOI for Measuring perimeter and area in low resolution images using a fuzzy approach

The Reconstruction of the Digital Hyperbola Segment from Its Code

Sladoje, Natasa

Part of International Conference on Discrete Geometry for Computer Imagery, p. 159-170, 2000

• DOI for The Reconstruction of the Digital Hyperbola Segment from Its Code

A characterization of digital disks by discrete moments

Zunic, Jovisa; Sladoje, Nataša

Part of International Conference on Computer Analysis of Images and Patterns, p. 582-589, 1997

• DOI for A characterization of digital disks by discrete moments

Ellipses estimation from their digitization

Sladoje, Nataša

Part of International Conference on Discrete Geometry for Computer Imagery, p. 187-198, 1997

• DOI for Ellipses estimation from their digitization

Combinatorial Image Analysis -: 20th International Workshop, IWCIA 2020, Novi Sad, Serbia, July 16-18, 2020, Proceedings

Lukic, Tibor; Barneva, Reneta; Brimkov, Valentin; Comic, Lidija et al.

2020

• DOI for Combinatorial Image Analysis -: 20th International Workshop, IWCIA 2020, Novi Sad, Serbia, July 16-18, 2020, Proceedings

Is Image-to-Image Translation the Panacea for Multimodal Image Registration? A Comparative Study

Lu, Jiahao; Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

2021

Cross-Sim-NGF: FFT-Based Global Rigid Multimodal Alignment of Image Volumes using Normalized Gradient Fields

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

2021

A Deep Learning based Pipeline for Efficient Oral Cancer Screening on Whole Slide Images

Lu, Jiahao; Sladoje, Natasa; Runow Stark, Christina; Darai Ramqvist, Eva et al.

2019

Fast and Robust Symmetric Image Registration Based on Intensity and Spatial Information

Öfverstedt, Johan; Lindblad, Joakim; Sladoje, Natasa

2018

Can representation learning for multimodal image registration be improved by supervision of intermediate layers?

Wetzer, Elisabeth; Lindblad, Joakim; Sladoje, Nataša

• DOI for Can representation learning for multimodal image registration be improved by supervision of intermediate layers?

UpStory: the Uppsala Storytelling dataset

Fraile, Marc; Calvo-Barajas, Natalia; Apeiron, Anastasia Sophia; Varni, Giovanna et al.

Sensitive key instance detection: Helping a cytotechnologist to find a needle in a haystack

Koriakina, Nadezhda; Sladoje, Nataša; Basic, Vladimir; Lindblad, Joakim

BIAFLOWS: A collaborative framework to benchmark bioimage analysis workflows

Rubens, Ulysse; Mormont, Romain; Baecker, Volker; Michiels, Gino et al.

• DOI for BIAFLOWS: A collaborative framework to benchmark bioimage analysis workflows

Perimeter estimation based on grey level object representation

Sladoje, Natasa; Lindblad, Joakim

2008

Review of scientific papers on fuzzy shape analysis

Sladoje, Natasa

2005

A Brief Review on Benno Artman's "Euclid - The Creation of Mathematics"

Sladoje, Natasa

2005

A report on 10th Summer School on Image Processing

Sladoje, Natasa

2002

Reviews on Scientific Papers on Application of Fuzzy Set Theory in Image Segmentation

Sladoje, Natasa

2002

The NEUBIAS Gateway: A hub for bioimage analysis methods and materials.

Cimini, Beth A; Nørrelykke, Simon F; Louveaux, Marion; Sladoje, Natasa et al.

2020

• DOI for The NEUBIAS Gateway: A hub for bioimage analysis methods and materials.