Alvaro Martinez Barrio

The regulation of methylation on the Z chromosome and the identification of multiple novel Male Hyper-Methylated regions in the chicken

Höglund, Andrey; Henriksen, Rie; Churcher, Allison M.; Guerrero-Bosagna, Carlos M. et al.

Part of PLOS Genetics, 2024

• DOI for The regulation of methylation on the Z chromosome and the identification of multiple novel Male Hyper-Methylated regions in the chicken
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The methylation landscape and its role in domestication and gene regulation in the chicken

Höglund, Andrey; Henriksen, Rie; Fogelholm, Jesper; Churcher, Allison M. et al.

Part of Nature Ecology & Evolution, p. 1713-1724, 2020

• DOI for The methylation landscape and its role in domestication and gene regulation in the chicken

The genomic footprint of sexual conflict

Sayadi, Ahmed; Martínez Barrio, Álvaro; Immonen, Elina; Dainat, Jacques et al.

Part of Nature Ecology & Evolution, p. 1725-1730, 2019

• DOI for The genomic footprint of sexual conflict
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RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding

Humble, Emily; Dasmahapatra, Kanchon K.; Martínez Barrio, Álvaro; Gregorio, Ines et al.

Part of G3, p. 2709-2722, 2018

• DOI for RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding

A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them

Humble, E.; Martinez-Barrio, Alvaro; Forcada, J.; Trathan, P. N. et al.

Part of Molecular Ecology Resources, p. 909-921, 2016

• DOI for A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them

The regulation of methylation on the Z chromosome and the identification of multiple novel Male Hyper-Methylated regions in the chicken

Höglund, Andrey; Henriksen, Rie; Churcher, Allison M.; Guerrero-Bosagna, Carlos M. et al.

Part of PLOS Genetics, 2024

• DOI for The regulation of methylation on the Z chromosome and the identification of multiple novel Male Hyper-Methylated regions in the chicken
• Download full text (pdf) of The regulation of methylation on the Z chromosome and the identification of multiple novel Male Hyper-Methylated regions in the chicken

The methylation landscape and its role in domestication and gene regulation in the chicken

Höglund, Andrey; Henriksen, Rie; Fogelholm, Jesper; Churcher, Allison M. et al.

Part of Nature Ecology & Evolution, p. 1713-1724, 2020

• DOI for The methylation landscape and its role in domestication and gene regulation in the chicken

The genomic footprint of sexual conflict

Sayadi, Ahmed; Martínez Barrio, Álvaro; Immonen, Elina; Dainat, Jacques et al.

Part of Nature Ecology & Evolution, p. 1725-1730, 2019

• DOI for The genomic footprint of sexual conflict
• Download full text (pdf) of The genomic footprint of sexual conflict

RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding

Humble, Emily; Dasmahapatra, Kanchon K.; Martínez Barrio, Álvaro; Gregorio, Ines et al.

Part of G3, p. 2709-2722, 2018

• DOI for RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding

A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them

Humble, E.; Martinez-Barrio, Alvaro; Forcada, J.; Trathan, P. N. et al.

Part of Molecular Ecology Resources, p. 909-921, 2016

• DOI for A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them

The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing

Martínez Barrio, Álvaro; Lamichhaney, Sangeet; Fan, Guangyi; Rafati, Nima et al.

Part of eLIFE, 2016

• DOI for The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing
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Amelanism in the corn snake is associated with the insertion of an LTR-retrotransposon in the OCA2 gene

Saenko, Suzanne V.; Lamichhaney, Sangeet; Barrio, Alvaro Martinez; Rafati, Nima et al.

Part of Scientific Reports, 2015

• DOI for Amelanism in the corn snake is associated with the insertion of an LTR-retrotransposon in the OCA2 gene
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Evolution of Darwin's finches and their beaks revealed by genome sequencing

Lamichhaney, Sangeet; Berglund, Jonas; Almen, Markus Sällman; Maqbool, Khurram et al.

Part of Nature, 2015

• DOI for Evolution of Darwin's finches and their beaks revealed by genome sequencing

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

Carneiro, Miguel; Rubin, Carl-Johan; Di Palma, Federica; Albert, Frank W. et al.

Part of Science, p. 1074-1079, 2014

• DOI for Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

Strong signatures of selection in the domestic pig genome

Rubin, Carl-Johan; Megens, H. -J; Barrio, Alvaro Martinez; Maqbool, K. et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 19529-19536, 2012

• DOI for Strong signatures of selection in the domestic pig genome

Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring

Lamichhaney, Sangeet; Barrio, Alvaro Martinez; Rafati, Nima; Sundström, Görel et al.

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 19345-19350, 2012

• DOI for Population-scale sequencing reveals genetic differentiation due to local adaptation in Atlantic herring

The First Sequenced Carnivore Genome Shows Complex Host-Endogenous Retrovirus Relationships

Barrio, Alvaro Martinez; Ekerljung, Marie; Jern, Patric; Benachenhou, Farid et al.

Part of PLOS ONE, 2011

• DOI for The First Sequenced Carnivore Genome Shows Complex Host-Endogenous Retrovirus Relationships

The genetic architecture of domestication in the chicken: effects of pleiotropy and linkage

Wright, Dominic; Rubin, Carl-Johan; Martinez Barrio, Alvaro; Schütz, K. et al.

Part of Molecular Ecology, p. 5140-5156, 2010

• DOI for The genetic architecture of domestication in the chicken: effects of pleiotropy and linkage

EVALLER: a web server for in silico assessment of potential protein allergenicity

Martinez Barrio, Alvaro; Soeria-Atmadja, Daniel; Nistér, Anders; Gustafsson, Mats G. et al.

Part of Nucleic Acids Research, 2007

• DOI for EVALLER: a web server for in silico assessment of potential protein allergenicity

Novel Bioinformatics Applications for Protein Allergology, Genome-Wide Association and Retrovirology Studies

Martínez Barrio, Álvaro

2010

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Exon resequencing of PMEL in Swedish melanoma patients

Golovko, Anna; Brukner, S.; Volker, J. M.; Barrio, Alvaro Martinez et al.

Part of The melanocyte and its environment, p. 15-18, 2012

Data mining of the dog genome reveals novel Canine Endogenous Retroviruses(CfERVs)

Martinez Barrio, Alvaro; Ekerljung, Marie; Jern, Patric; Benachenhou, Farid et al.

GeneFinder: "in silico" positional cloning of trait genes

Martinez Barrio, Alvaro; Feifei, Xu; Lagercrantz, Erik; Bongcam-Rudloff, Erik