Joakim Lindblad
Professor at Department of Information Technology; Vi3; Image Analysis
- Telephone:
- +46 18 471 34 32
- Mobile phone:
- +46 73 316 85 49
- E-mail:
- joakim.lindblad@it.uu.se
- Visiting address:
- Hus 10, Regementsvägen 10
- Postal address:
- Box 337
751 05 UPPSALA
- Academic merits:
- Docent
Short presentation
ORCID iD: 0000-0001-7312-8222
Keywords
- bildanalys
- artificial intelligence
- image analysis
- deep learning
- image registration
- pattern recognition
- quantitative microscopy
- shape analysis
- maskininlärning
Biography
Joakim Lindblad received the M.Sc. in engineering physics and Ph.D. in computerized image analysis from Uppsala University, Sweden, in 1997 and 2003, respectively. He is currently Professor of Computerized Image Processing at the Department of Information Technology, Uppsala University, Sweden; Senior Research Associate at Mathematical Institute of the Serbian Academy of Sciences and Arts, Serbia; and Head of Research at Topgolf Sweden AB, Stockholm, Sweden. His research interests involve development of general and robust methods for image processing and analysis, including data driven approaches such as deep learning, typically within the context of biomedical and medical applications.

Publications
Recent publications
Part of Computers in Biology and Medicine, p. 1-14, 2025
- DOI for Let it shine: Autofluorescence of Papanicolaou-stain improves AI-based cytological oral cancer detection
- Download full text (pdf) of Let it shine: Autofluorescence of Papanicolaou-stain improves AI-based cytological oral cancer detection
A Comparison of Deep Learning Methods for Cell Detection in Digital Cytology
Part of Image Analysis, p. 264-277, 2025
UpStory: the uppsala storytelling dataset
Part of Frontiers in Robotics and AI, 2025
- DOI for UpStory: the uppsala storytelling dataset
- Download full text (pdf) of UpStory: the uppsala storytelling dataset
Are We Friends?: End-to-End Prediction of Child Rapport in Guided Play
Part of Computer Vision – ECCV 2024 Workshops, p. 380-392, 2024
Part of Pattern Recognition, p. 408-421, 2024
All publications
Articles in journal
Part of Computers in Biology and Medicine, p. 1-14, 2025
- DOI for Let it shine: Autofluorescence of Papanicolaou-stain improves AI-based cytological oral cancer detection
- Download full text (pdf) of Let it shine: Autofluorescence of Papanicolaou-stain improves AI-based cytological oral cancer detection
UpStory: the uppsala storytelling dataset
Part of Frontiers in Robotics and AI, 2025
- DOI for UpStory: the uppsala storytelling dataset
- Download full text (pdf) of UpStory: the uppsala storytelling dataset
Part of PLOS ONE, 2024
- DOI for Deep multiple instance learning versus conventional deep single instance learning for interpretable oral cancer detection
- Download full text (pdf) of Deep multiple instance learning versus conventional deep single instance learning for interpretable oral cancer detection
Cross-modality sub-image retrieval using contrastive multimodal image representations
Part of Scientific Reports, 2024
- DOI for Cross-modality sub-image retrieval using contrastive multimodal image representations
- Download full text (pdf) of Cross-modality sub-image retrieval using contrastive multimodal image representations
INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
Part of PLOS ONE, 2023
- DOI for INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
- Download full text (pdf) of INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration
A paradigm shift in the prevention and diagnosis of oral squamous cell carcinoma.
Part of Journal of Oral Pathology & Medicine, p. 826-833, 2023
- DOI for A paradigm shift in the prevention and diagnosis of oral squamous cell carcinoma.
- Download full text (pdf) of A paradigm shift in the prevention and diagnosis of oral squamous cell carcinoma.
Dental hygienists and dentists as providers of brush biopsies for oral mucosa screening
Part of International Journal of Dental Hygiene, p. 524-532, 2023
- DOI for Dental hygienists and dentists as providers of brush biopsies for oral mucosa screening
- Download full text (pdf) of Dental hygienists and dentists as providers of brush biopsies for oral mucosa screening
Part of Pattern Recognition Letters, p. 196-203, 2022
- DOI for Fast computation of mutual information in the frequency domain with applications to global multimodal image alignment
- Download full text (pdf) of Fast computation of mutual information in the frequency domain with applications to global multimodal image alignment
Is image-to-image translation the panacea for multimodal image registration?: A comparative study
Part of PLOS ONE, 2022
- DOI for Is image-to-image translation the panacea for multimodal image registration?: A comparative study
- Download full text (pdf) of Is image-to-image translation the panacea for multimodal image registration?: A comparative study
Guest Editorial: Discrete Geometry and Mathematical Morphology
Part of Journal of Mathematical Imaging and Vision, p. 691-692, 2022
Part of Journal of Maxillofacial and Oral Surgery, p. 23-32, 2022
- DOI for Early Detection of Oral Potentially Malignant Disorders: A Review on Prospective Screening Methods with Regard to Global Challenges
- Download full text (pdf) of Early Detection of Oral Potentially Malignant Disorders: A Review on Prospective Screening Methods with Regard to Global Challenges
CytoBrowser: a browser-based collaborative annotation platform for whole slide images
Part of F1000 Research, 2021
Stochastic Distance Transform: Theory, Algorithms and Applications
Part of Journal of Mathematical Imaging and Vision, p. 751-769, 2020
- DOI for Stochastic Distance Transform: Theory, Algorithms and Applications
- Download full text (pdf) of Stochastic Distance Transform: Theory, Algorithms and Applications
Generalised deep learning framework for HEp-2 cell recognition using local binary pattern maps
Part of IET Image Processing, p. 1201-1208, 2020
Part of Journal of Electronic Imaging (JEI), 2019
Facilitating Ultrastructural Pathology through Automated Imaging and Analysis
Part of Journal of Pathology Informatics, p. 38-39, 2019
Part of IEEE Transactions on Image Processing, p. 3584-3597, 2019
- DOI for Fast and Robust Symmetric Image Registration Based on Distances Combining Intensity and Spatial Information
- Download full text (pdf) of Fast and Robust Symmetric Image Registration Based on Distances Combining Intensity and Spatial Information
Part of Journal of Electronic Imaging (JEI), 2016
- DOI for Restoration of images degraded by signal-dependent noise based on energy minimization: an empirical study
- Download full text (pdf) of Restoration of images degraded by signal-dependent noise based on energy minimization: an empirical study
Estimation of Feret's diameter from pixel coverage representation of a shape
Part of Pattern Recognition Letters, p. 37-45, 2016
Estimation of linear deformations of 2D and 3D fuzzy objects
Part of Pattern Recognition, p. 1391-1403, 2015
Precise Euclidean distance transforms in 3D from voxel coverage representation
Part of Pattern Recognition Letters, p. 184-191, 2015
Linear time distances between fuzzy sets with applications to pattern matching and classification
Part of IEEE Transactions on Image Processing, p. 126-136, 2014
A new set distance and its application to shape registration
Part of Pattern Analysis and Applications, p. 141-152, 2014
Blind Color Decomposition of Histological Images
Part of IEEE Transactions on Medical Imaging, p. 983-994, 2013
Coverage segmentation based on linear unmixing and minimization of perimeter and boundary thickness
Part of Pattern Recognition Letters, p. 728-738, 2012
Regularized image denoising based on spectral gradient optimization
Part of Inverse Problems, 2011
Defuzzification of spatial fuzzy sets by feature distance minimization
Part of Image and Vision Computing, p. 127-141, 2011
A Graph-based Framework for Sub-pixel Image Segmentation
Part of Theoretical Computer Science, p. 1338-1349, 2011
Part of Nuclear Instruments and Methods in Physics Research Section A, p. 143-148, 2011
Part of Nuclear Instruments and Methods in Physics Research Section A, p. 143-148, 2011
Part of Computer Methods and Programs in Biomedicine, p. 25-34, 2011
Part of Aging Cell, p. 685-697, 2010
Part of Experimental Physiology, p. 117-129, 2009
Part of Neuromuscular Disorders, p. 605-606, 2009
High-precision boundary length estimation by utilizing gray-level information
Part of IEEE Transactions on Pattern Analysis and Machine Intelligence, p. 357-363, 2009
Part of Neuromuscular Disorders, p. 605-606, 2009
Part of International Journal of Adhesion and Adhesives, p. 551-557, 2009
Part of Biophysical Journal, 2007
Representation and Reconstruction of Fuzzy Disks by Moments
Part of Fuzzy sets and systems (Print), p. 517-534, 2007
Surface Area Estimation of Digitized 3D Objects using Weighted Local Configurations
Part of Image and Vision Computing, p. 111-122, 2005
Image Analysis for Automatic Segmentation of Cytoplasms and Classification of Rac1 Activation
Part of Cytometry, p. 22-23, 2004
Robust cell image segmentation methods
Part of Pattern Recognition and Image Analysis: Advances in Mathematical Theory and Applications, p. 157-167, 2004
Algorithms for cytoplasm segmentation of fluorescence labeled cells
Part of Analytical Cellular Pathology, p. 101-111, 2002
Statistical quality control for segmentation of fluorescence labeled cells
Part of In Proceedings of the 5th Korea-Germany Joint Workshop on Advanced Medical Image Processing, Seoul, Korea, 2001
Part of In Proceedings of the 12th Scandinavian Conference on Image Analysis (SCIA), Bergen, Norway, p. 264-271, 2001
Histogram thresholding using kernel density estimates
Part of In Proceedings of the Swedish Society for Automated Image Analysis (SSAB) Symposium on Image Analysis, Halmstad, Sweden, p. 41-44, 2000
Articles, review/survey
Correlated multimodal imaging in life sciences: lessons learnt
Part of Frontiers in Biomaterials Science, 2024
- DOI for Correlated multimodal imaging in life sciences: lessons learnt
- Download full text (pdf) of Correlated multimodal imaging in life sciences: lessons learnt
Icke-invasiv kontroll av cellförändringar i munslemhinnan
Part of Tandläkartidningen, p. 48-55, 2021
Chapters in book
Computer-assisted analysis of multimodal image data—perspectives and conclusion
Part of Imaging Modalities for Biological and Preclinical Research, Institute of Physics Publishing (IOPP), 2021
Introduction—computer-assisted analysis of multimodal image data
Part of Imaging Modalities for Biological and Preclinical Research, Institute of Physics Publishing (IOPP), 2021
The coverage model and its use in image processing
Part of Selected Topics on Image Processing and Cryptology, p. 39-117, Mathematical Institute of the Serbian Academy of Sciences and Arts, 2012
Part of Proceedings of the 12th Scandinavian Conference on Image Analysis (SCIA), 2001
Collections (editor)
Springer, 2021
Comprehensive doctoral thesis
Conference papers
A Comparison of Deep Learning Methods for Cell Detection in Digital Cytology
Part of Image Analysis, p. 264-277, 2025
Are We Friends?: End-to-End Prediction of Child Rapport in Guided Play
Part of Computer Vision – ECCV 2024 Workshops, p. 380-392, 2024
Part of Pattern Recognition, p. 408-421, 2024
2023
Part of IbPRIA 2023: Pattern Recognition and Image Analysis, p. 261-275, 2023
Partial dimensional collapse in contrastive learning when using intermediate layers
2023
Contrastive Learning of Equivariant Image Representations for Multimodal Deformable Registration
Part of 2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 2023
2023
DCNN based Oral Cancer Screening using Whole Slide Cytology Images: Effect of Increased Patch Size
2022
Rotation-Equivariant Semantic Instance Segmentation on Biomedical Images
Part of MEDICAL IMAGE UNDERSTANDING AND ANALYSIS, MIUA 2022, p. 283-297, 2022
Efficient Algorithms for Global Multimodal Image Registration
2022
Rotationally Equivariant Representation Learning for Multimodal Images
2022
2022
Label-Free Reverse Image Search of Multimodal Microscopy Images
2022
Re-Ranking Strategies in Cross-Modality Microscopy Retrieval
2022
Part of ICMI '22, p. 444-454, 2022
- DOI for End-to-End Learning and Analysis of Infant Engagement During Guided Play: Prediction and Explainability
- Download full text (pdf) of End-to-End Learning and Analysis of Infant Engagement During Guided Play: Prediction and Explainability
End-to-end Multiple Instance Learning with Gradient Accumulation
Part of 2022 IEEE International Conference on Big Data (Big Data), p. 2742-2746, 2022
Part of Companion Publication of the 2021 International Conference on Multimodal Interaction, p. 403-407, 2021
- DOI for Automatic Analysis of Infant Engagement during Play: An End-to-end Learning and Explainable AI Pilot Experiment
- Download full text (pdf) of Automatic Analysis of Infant Engagement during Play: An End-to-end Learning and Explainable AI Pilot Experiment
The Effect of Within-Bag Sampling on End-to-End Multiple Instance Learning
Part of Proceedings of the 12th International Symposium on Image and Signal Processing and Analysis (ISPA), p. 183-188, 2021
2021
Image-to-Image Translation in Multimodal Image Registration: How Well Does It Work?
2021
Registration of Multimodal Microscopy Images using CoMIR – learned structural image representations
2021
Contrastive Learning for Equivariant Multimodal Image Representations
2021
Part of Progress in Pattern Recognition, Image Analysis, Computer Vision, and Applications, p. 24-33, 2021
Comir: Contrastive multimodal image representation for registration
2021
Part of 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI), p. 517-521, 2020
Part of 4th NEUBIAS Conference, Bordeaux, France, 2020
A Deep Learning Based Pipeline for Efficient Oral Cancer Screening on Whole Slide Images
Part of Image Analysis and Recognition, p. 249-261, 2020
Part of 4th NEUBIAS Conference, Bordeaux, France, 2020
CoMIR: Contrastive Multimodal Image Representation for Registration
Part of NeurIPS - 34th Conference on Neural Information Processing Systems, 2020
Part of 3rd NEUBIAS Conference, Luxembourg, 2-8 February 2019, 2019
On the Effectiveness of Generative Adversarial Networks as HEp-2 Image Augmentation Tool
Part of Scandinavian Conference on Image Analysis, p. 439-451, 2019
Robust Symmetric Affine Image Registration
Part of Swedish Symposium on Image Analysis, 2019
Oral Cancer Detection: A Comparison of Texture Focused Deep Learning Approaches
Part of Proceedings of the Swedish Society for Automated Image Analysis (SSBA), 2019
Towards automated multiscale Glomeruli detection and analysis in TEM by fusion of CNN and LBP maps
Part of 3rd NEUBIAS Conference, 2019
Part of Computer Vision, p. 465-475, 2019
Stochastic Distance Functions with Applications in Object Detection and Image Segmentation
Part of Swedish Symposium on Image Analysis, 2019
Part of Discrete Geometry for Computer Imagery, p. 75-86, 2019
Texture-based oral cancer detection: A performance analysis of deep learning approaches.
Part of 3rd NEUBIAS Conference, 2019
Part of EAOM2018, 2018
Denoising of Short Exposure Transmission Electron Microscopy Images using CNN
Part of Swedish Symposium on Image Analysis, 2018
Part of Swedish Symposium on Deep Learning, 2018
Denoising of short exposure transmission electron microscopy images for ultrastructural enhancement
Part of Proc. 15th International Symposium on Biomedical Imaging, p. 921-925, 2018
Part of CYTO2018, 2018
Part of Swedish Symposium on Image Analysis, 2018
Decoding gene expression in 2D and 3D
Part of Image Analysis, p. 257-268, 2017
- DOI for Decoding gene expression in 2D and 3D
- Download full text (pdf) of Decoding gene expression in 2D and 3D
Part of Swedish Symposium on Image Analysis, 2017
Part of Image Analysis, p. 362-374, 2017
Part of Swedish Symposium on Image Analysis, 2017
Part of Mathematical Morphology and its Applications to Signal and Image Processing, p. 395-407, 2017
Part of Image Analysis, p. 407-418, 2017
Part of In Proc. of the 18th International Workshop on Combinatorial Image Analysis, IWCIA2017, p. 243-255, 2017
Part of Proceedings of the Swedish Society for Automated Image Analysis, p. 137-141, 2016
Signature of a Shape Based on Its Pixel Coverage Representation
Part of Discrete Geometry for Computer Imagery, DGCI 2016. Lecture Notes in Computer Science, Vol. 9647, pp. 181-193, Springer 2016, p. 181-193, 2016
Part of 2016 Ieee 13Th International Symposium On Biomedical Imaging (ISBI), p. 123-127, 2016
Part of Biomedical Imaging (ISBI), 2016 IEEE 13th International Symposium on, p. 386-390, 2016
Single image super-resolution reconstruction in presence of mixed Poisson-Gaussian noise
Part of 2016 SIXTH INTERNATIONAL CONFERENCE ON IMAGE PROCESSING THEORY, TOOLS AND APPLICATIONS (IPTA), 2016
Coverage segmentation of 3D thin structures
Part of Proc. 5th International Conference on Image Processing Theory, Tools and Applications, p. 23-28, 2015
Microscopy image enhancement for cost-effective cervical cancer screening
Part of Image Analysis, p. 440-451, 2015
High-resolution reconstruction by feature distance minimization from multiple views of an object
Part of Proc. 5th International Conference on Image Processing Theory, Tools and Applications, p. 29-34, 2015
αLBP – a novel member of the Local Binary Pattern family based on α-cutting
Part of Proc. 9th International Symposium on Image and Signal Processing and Analysis, p. 13-18, 2015
Exact linear time Euclidean distance transforms of grid line sampled shapes
Part of Mathematical Morphology and its Applications to Signal and Image Processing, p. 645-656, 2015
Optimizing optics and imaging for pattern recognition based screening tasks
Part of Proc. 22nd International Conference on Pattern Recognition, p. 3333-3338, 2014
An evaluation of potential functions for regularized image deblurring
Part of Image Analysis and Recognition, p. 150-158, 2014
Coverage segmentation of thin structures by linear unmixing and local centre of gravity attraction
Part of Proc. 8th International Symposium on Image and Signal Processing and Analysis, p. 83-88, 2013
Precise Estimation of the Projection of a Shape from a Pixel Coverage Representation
Part of Proceedings of the 7th IEEE International Symposium on Image and Signal Processing and Analysis (ISPA), p. 569-574, 2011
Distance measures between digital fuzzy objects and their applicability in image processing
Part of Combinatorial Image Analysis, p. 385-397, 2011
Methods for 3D Visualization of Bone Tissue in the Proximity of Implants
Part of Swedish Symposium on Image Analysis 2010, p. 149-152, 2010
De-noising of SRµCT Fiber Images by Total Variation Minimization
Part of Proceedings of the 20th International Conference on Pattern Recognition (ICPR10), p. 4621-4624, 2010
Methods for Visualization of Bone Tissue in the Proximity of Implants
Part of International Conference on Computer Vision and Graphics, p. 243-250, 2010
The Sum of minimal distances as a useful distance measure for image registration
Part of Proceedings SSBA 2010, p. 55-58, 2010
Estimation of linear deformations of 3D objects
Part of Proceedings of 2010 IEEE 17th International Conference on Image Processing, p. 153-156, 2010
Improved Quantification of Bone Remodelling by Utilizing Fuzzy Based Segmentation
Part of Image Analysis, p. 750-759, 2009
On set distances and their application to image registration
Part of Proc. 6th International Symposium on Image and Signal Processing and Analysis, p. 449-454, 2009
Sub-pixel Segmentation with the Image Foresting Transform
Part of Proceedings of International Workshop on Combinatorial Image Analysis, p. 201-211, 2009
Part of 9th International ELMI Meeting on Advanced Light Microscopy, p. 66-67, 2009
Dimensionality Reduction for Colour Based Pixel Classification
Part of Proceedings SSBA 2009, p. 65-68, 2009
Pixel Coverage Segmentation for Improved Feature Estimation
Part of 15th International Conference on Image Analysis and Processing, p. 929-938, 2009
Recovering Affine Deformations of Fuzzy Shapes
Part of 16th Scandinavian Conference on Image Analysis, p. 735-744, 2009
Quantification of Bone Remodeling in SRuCTImages of Implants
Part of 16th Scandinavian Conference, SCIA 2009, Oslo, Norway, June 15-18, 2009, p. 770-779, 2009
Correction in 3D Confocal Images
Part of Proceedings of the 2008 Symposium on Image Analysis, p. 31-34, 2008
Part of AstraTech World Congress 2008, p. 136-137, 2008
Registration of 2D Histological Images of Bone Implants with 3D SRuCT Volumes
Part of SSBA 2008, p. 19-22, 2008
Att hitta ett histologiskt 2D snitt av ett benimplantat i en 3D mikrotomografivolym
Part of Medicinteknikdagarna 2008, p. 103-103, 2008
An Automated Image Analysis Method for Measuring Fibre Contact in Fibrous and Composite Materials
Part of 13th European Conference on Composite Materials (ECCM), 2008
Part of Proc. 5th International Symposium on Biomedical Imaging, p. 1363-1366, 2008
Algorithms for cross-talk suppression in fluorescence microscopy
Part of Medicinteknikdagarna 2008, p. 64-64, 2008
Deterministic Defuzzification based on Spectral Projected Gradient Optimization
Part of 30th Symposium of the German Association for Pattern Recognition (DAGM), p. 476-485, 2008
Registration of 2D Histological Images of Bone Implants with 3D SRμCT Volumes
Part of Advances in Visual Computing, p. 1071-1080, 2008
- DOI for Registration of 2D Histological Images of Bone Implants with 3D SRμCT Volumes
- Download full text (pdf) of Registration of 2D Histological Images of Bone Implants with 3D SRμCT Volumes
Part of Proceedings SSBA 2008, Symposium on image analysis, Lund, 2008
Spatially-variant morphological operations on binary images based on the polar distance transform
Part of ICPR 2008, 2008
Analysis of Skeletal Fibers in Three Dimensional Images: Methodological considerations
Part of XXXVIth European Muscle Conference of the European Society for Muscle Research, p. 130, 2007
Analysis of Skeletal Fibers in Three Dimensional Images
Part of Medicinteknikdagarna 2007, p. 1, 2007
Image Analysis of Bone Tissue Remodelling Around Implants
Part of European Conference on Biomaterials 2007, 2007
Quantification of bone remodeling in the proximity of implants
Part of 12th Int. Conf. on Computer Analysis of Images and Patterns, p. 253-260, 2007
Analysis of Histological Image and SRuCT Image Volumes of Bone Remodeling Around Implants
Part of Proceedings SSBA 2007, p. 4, 2007
Grey Weighted Polar Distance Transform for Outlining Circular and Approximately Circular Objects
Part of 14th International Conference on Image Analysis and Processing, p. 647-652, 2007
Defuzzification by Feature Distance Minimization Based on DC Programming
Part of 5th International Symposium on Image and Signal Processing and Analysis, 2007, p. 373-378, 2007
Part of Progress in Paper Physics Seminar, Oxford, Ohio, 2006, 2006
Feature Based Defuzzification at Increased Spatial Resolution
Part of Combinatorial Image Analysis, p. 131-143, 2006
Part of 2006 Progress in Paper Physics, 2006
Part of 2006 Progress in Paper Physics, 2006
Feature Based Defuzzification in Z² and Z³ Using a Scale Space Approach
Part of Discrete Geometry for Computer Imagery 13th International Conference, DGCI 2006, Szeged, Hungary, October 25-27, 2006. Proceedings, p. 379-390, 2006
Surface Volume Estimation of Digitized Hyperplanes Using Weighted Local Configurations
Part of Proceedings of Discrete Geometry for Computer Imagery, p. 252-262, 2005
Estimation of moments of digitized objects with fuzzy borders
Part of Proc. of 13th International Conference on Image Analysis and Processing, p. 188-195, 2005
Segmentation and separation of point like fluorescent markers in digital images
Part of ISBI2004, p. 1291-1294, 2004
Segmentation of point-like fluorescent markers
Part of Proceedings, p. 146-149, 2004
Defuzzification of discrete objects by optimizing area and perimeter similarity
Part of Proceedings of International Conference on Pattern Recognition (ICPR 2004), p. 526-629, 2004
Surface area estimation of digitized planes using weighted local configurations
Part of 11th International Conference on Discrete Geometry for Computer Imagery (DGCI), p. 348-357, 2003
Surface area estimation of digitized 3D objects using local computations
Part of Proceedings of Discrete Geometry for Computer Imagery (DGCI2002), p. 267-278, 2002
Statistical quality control for segmentation of fluorescence labelled cells
Part of 5th Korea-Germany Joint Workshop on Advanced Medical Image Processing, Seoul, Korea, 2001
Analysis of cells using image data from sequential immunofluorescence staining experiments
Part of 5th Korea-Germany Joint Workshop on Advanced Medical Image Processing, Seoul, Korea, 2001
Perimeter and Area Estimates for Digitized Objects
Part of Swedish Society for Automated Image Analysis Symposium - SSAB 2001, ITN, Campus, p. 113-117, 2001
Part of Proceedings of SCIA-01 (Scandinavian Conference on Image Analysis), p. 25-31, 2001
Part of Proceedings of the 12th Scandinavian Conference on Image Analysis (SCIA), p. 264-271, 2001
Automatic cytoplasm segmentation of fluorescence labelled cells
Part of Symposium on Image Analysis - SSAB 2000, p. 29-32, 2000
Histogram thresholding using kernel density estimates
Part of Symposium on Image Analysis - SSAB 2000, p. 41-44, 2000
Part of Amersham Pharmacia Biotech Uppsala R&D day, December 2, 1999., 1999
Manuscripts (preprints)
2021
Is Image-to-Image Translation the Panacea for Multimodal Image Registration? A Comparative Study
2021
A Deep Learning based Pipeline for Efficient Oral Cancer Screening on Whole Slide Images
2019
Fast and Robust Symmetric Image Registration Based on Intensity and Spatial Information
2018
Sensitive key instance detection: Helping a cytotechnologist to find a needle in a haystack