Publications

Early life metabolic disruption: multigenerational consequences on the genome, epigenome and microbiota

de Anca Prado, Violeta

2026

Doctoral thesis, comprehensive summary

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Epigenetic changes as regulatory mechanism for the expression of life history stages in Zonotrichia capensis inhabiting an aseasonal environment

Pèrtille, Fábio; Gonzalez- Gomez, Paulina L.; Wingfield, John C.; Guerrero-Bosagna, Carlos

Part of Journal of Avian Biology, 2026

Article in journal

• DOI for Epigenetic changes as regulatory mechanism for the expression of life history stages in Zonotrichia capensis inhabiting an aseasonal environment
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Ciliary flow and morphology shape mass transport at the surface and within gastrovascular cavities of black corals

Godefroid, Mathilde; Otero-Ferrer, Francisco; Wind-Hansen, Michael; Behrendt, Lars et al.

Part of Communications Biology, 2026

Article in journal

• DOI for Ciliary flow and morphology shape mass transport at the surface and within gastrovascular cavities of black corals
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DNA methylation in mouse hippocampus following exposure to dietary stress

Lugnet, Jasmine

2026

Student thesis

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Lights out: PP2C phosphatases reset phototropin signaling in darkness

Bourgade, Barbara

Part of The Plant Cell, 2026

Article in journal

• DOI for Lights out: PP2C phosphatases reset phototropin signaling in darkness
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Moderate temperature shifts elicit large-scale changes in the physiology and behavior of a green microalga

Bourgade, Barbara; Pivato, Matteo

Part of The Plant Cell, 2026

Article in journal

• DOI for Moderate temperature shifts elicit large-scale changes in the physiology and behavior of a green microalga
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Effects of Environmentally Relevant Pharmaceuticals on Neurite Degeneration in SH-SY5Y Cells: Implications for Alzheimer's Disease

Åhlén, Tyra

2026

Student thesis

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Environmental pollution as risk factors for Alzheimer’s: Studies with the HT-22 cellmodel

Nordstrand, Linnea

2026

Student thesis

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Iron homeostasis is critical for hematopoietic cell differentiation in a crustacean, Pacifastacus leniusculus

Luangtrakul, Waruntorn; Phiwthon, Tannatorn; Boonchuen, Pakpoom; Söderhäll, Kenneth et al.

Part of Fish and Shellfish Immunology, 2026

Article in journal

• DOI for Iron homeostasis is critical for hematopoietic cell differentiation in a crustacean, Pacifastacus leniusculus
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The role of gene-environment interactions in endocrine-sensitive life stages for shaping mental health: focus on the RE-MEND project

Abualia, Khawla; Cediel-Ulloa, Andrea; Allsopp, Philip; Augustine, Angelika et al.

Part of Frontiers in Psychiatry, 2026

Article, review/survey

• DOI for The role of gene-environment interactions in endocrine-sensitive life stages for shaping mental health: focus on the RE-MEND project
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Motivation in cognitive tests and its outcome on test performance in pigs

Galvagnon, C.; Garcia, I. Sanchez; Seddaiu, P.; Khatiwada, S. et al.

Part of Animal, 2026

Article in journal

• DOI for Motivation in cognitive tests and its outcome on test performance in pigs
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An effect-based approach to assess PFAS toxicity: Comparative study of treated leachate and spike experiments

Ravikumar, Jyotsna

2026

Student thesis

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Sex-Specific Gene Expression Ontogeny During Gonadal Development in Post-Metamorphic Xenopus tropicalis

Marini, Daniele; Roza, Mauricio; Berg, Cecilia; Brouard, Vanessa

Part of Molecular Reproduction and Development, 2026

Article in journal

• DOI for Sex-Specific Gene Expression Ontogeny During Gonadal Development in Post-Metamorphic Xenopus tropicalis
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Profiling of 5-hydroxymethylcytosine in blood reveals preferential enrichment at exon-intron junctions and predictive value for Parkinson's disease

Antczak, Philipp; Brandt, Peter; Radosavljevic, Lav; Svenningsson, Per et al.

Part of npj Parkinson's Disease, 2026

Article in journal

• DOI for Profiling of 5-hydroxymethylcytosine in blood reveals preferential enrichment at exon-intron junctions and predictive value for Parkinson's disease
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Spatially resolved micromechanical characterisation of human testis tissue reveals distinct signatures across developing, adult and pathological tissue states

Andersson, I.; Ghanami Gashti, N.; Mahon, O.R.; O'Meara, S. et al.

Part of Bioactive Materials, p. 623-637, 2026

Article in journal

• DOI for Spatially resolved micromechanical characterisation of human testis tissue reveals distinct signatures across developing, adult and pathological tissue states
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Testicular organoids formation from leukaemia-infiltrated prepubertal testicular tissue: implications for fertility preservation

Cui, Yanhua; Lohi, Jouko; Lindskog, Cecilia; Jahnukainen, Kirsi et al.

Part of Leukemia, p. 1044-1048, 2026

Article in journal

• DOI for Testicular organoids formation from leukaemia-infiltrated prepubertal testicular tissue: implications for fertility preservation
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Effects of Leukemic Cell Infiltration on the Spermatogonial Stem Cell Niche

Nilsson, Lisa

2026

Student thesis

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Glutamate-Induced Oxidative Stress and Possible 17β-Estradiol Neurotoxicity in HT22 Cells: An in vitro Study

Nadeau, Hanna

2026

Student thesis

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From correlation to causation: Integrating cohorts with experimental studies in mixture toxicology

Elagali, Ahmed; Rüegg, Joëlle; Testa, Giuseppe; Sapounidou, Maria et al.

Part of Neurotoxicology, 2026

Article in journal

• DOI for From correlation to causation: Integrating cohorts with experimental studies in mixture toxicology
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New approach methodologies (NAMs) for improved developmental and reproductive toxicity (DART) assessment with focus on endocrine disruption - a PARC project

Ardenkjaer-Skinnerup, Jacob; Baert, Yoni; Bajard, Lola; Blum, Jonathan et al.

Part of Frontiers in Toxicology, 2026

Article, review/survey

• DOI for New approach methodologies (NAMs) for improved developmental and reproductive toxicity (DART) assessment with focus on endocrine disruption - a PARC project
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Sex, stress, and the heart: long-term cardiovascular effects of embryonic metabolic disruption

Lees, John; Bicici, Betul; Berglund, Stina; Smith, Kerri L. M. et al.

Part of American Journal of Physiology. Heart and Circulatory Physiology, 2026

Article in journal

• DOI for Sex, stress, and the heart: long-term cardiovascular effects of embryonic metabolic disruption
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Benchmarking of methods to analyse data derived from GBS-MeDIP

de Anca Prado, Violeta; Pèrtille, Fábio; Sá, Pedro; Gòdia, Marta et al.

Part of BMC Bioinformatics, 2026

Article in journal

• DOI for Benchmarking of methods to analyse data derived from GBS-MeDIP
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The role of mitophagy during hematopoiesis in an invertebrate, Pacifastacus leniusculus

Luangtrakul, Waruntorn; Söderhäll, Kenneth; Söderhäll, Irene

Part of Journal of Immunology, 2026

Article in journal

• DOI for The role of mitophagy during hematopoiesis in an invertebrate, Pacifastacus leniusculus
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PmVago1 and PmVago4 from Penaeus monodon act as cytokine-like mediators of antiviral immune responses to white spot syndrome virus in penaeid shrimp

Nanakorn, Zittipong; Kawai, Taro; Söderhäll, Irene; Söderhäll, Kenneth et al.

Part of Fish and Shellfish Immunology, 2026

Article in journal

• DOI for PmVago1 and PmVago4 from Penaeus monodon act as cytokine-like mediators of antiviral immune responses to white spot syndrome virus in penaeid shrimp

The words to say it ¹: gender dysphoria, gender identification, trans and people aged 15–35 in Sweden

Özel, Fatih; Griffin, Gabriele; Rüegg, Joëlle

Part of Journal of Gender Studies, p. 771-790, 2026

Article in journal

• DOI for The words to say it ¹: gender dysphoria, gender identification, trans and people aged 15–35 in Sweden
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Early-Life Stress and the Avian Epigenome: Ontogenetic Responses in DNA Methylation and miRNA in Gallus gallus domesticus

Sourani, Farnaz

2026

Doctoral thesis, comprehensive summary

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Epigenetic changes and their potential reversibility in mental health disorders

Allen, Micah; Guerrero-Bosagna, Carlos

Part of Essays in Biochemistry, p. 305-316, 2025

Article, review/survey

• DOI for Epigenetic changes and their potential reversibility in mental health disorders
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Selection for Tameness in Red Junglefowl Recapitulates Genetic Loci Associated With Domestication-Related Brain Composition

Guerrero-Bosagna, Carlos; Pèrtille, Fábio; Moradinour, Zahra; Katajama, Rebecca et al.

Part of Molecular Ecology, 2025

Article in journal

• DOI for Selection for Tameness in Red Junglefowl Recapitulates Genetic Loci Associated With Domestication-Related Brain Composition
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Transgenerational Consequences of Imidacloprid Larval Diet Contamination in the Sheep Blowfly Lucilia sericata (Diptera: Calliphoridae)

Olivares-Castro, Gabriela; Schapheer, Constanza; Guerrero-Bosagna, Carlos; Acuna-Rodriguez, Ian S. et al.

Part of Insects, 2025

Article in journal

• DOI for Transgenerational Consequences of Imidacloprid Larval Diet Contamination in the Sheep Blowfly Lucilia sericata (Diptera: Calliphoridae)
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High-throughput oxygen consumption measurements in self-organizing 3D models under tuneable chemical environments

Tenje, Maria; Cui, Yuan; Hakhverdyan, Sona; Luk, Nicole Sui Man et al.

2025

Conference paper

Differentially expressed transcripts associated with depressive symptoms during pregnancy and postpartum

Björvang, Richelle D.; Vrettou, Maria; Bujanda Cundin, Xabier; Del Prete, Eugenio et al.

Part of Molecular Psychiatry, p. 4736-4748, 2025

Article in journal

• DOI for Differentially expressed transcripts associated with depressive symptoms during pregnancy and postpartum
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Integrative focus on the space exposome-integrome: physiological challenges and practical limits of countermeasures beyond low Earth orbit

Bailey, Damian M.; Blottner, Dieter; Gunga, Hanns-Christian; Schneider, Stefan et al.

Part of npj Microgravity, 2025

Article, review/survey

• DOI for Integrative focus on the space exposome-integrome: physiological challenges and practical limits of countermeasures beyond low Earth orbit
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Developmental exposure to environmentally relevant PFOS and PFBS disrupts adult behaviour, reproductive fitness, and lipid metabolism in Zebrafish

Fallet, Manon; Zetzsche, Jonas; Di Criscio, Michela; Yon, Coralie et al.

Part of Environmental Sciences Europe, 2025

Article in journal

• DOI for Developmental exposure to environmentally relevant PFOS and PFBS disrupts adult behaviour, reproductive fitness, and lipid metabolism in Zebrafish
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On being (not so) different: perceptions of gender dysphoria and neurodiversity among people aged 15-35 in Sweden

Özel, Fatih; Griffin, Gabriele

Part of Frontiers in Sociology, 2025

Article in journal

• DOI for On being (not so) different: perceptions of gender dysphoria and neurodiversity among people aged 15-35 in Sweden
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Stability After Legal Gender Change Among Adults With Gender Dysphoria

Clark, Kristen D.; White, Richard A.; Karamanis, Georgios; Indremo, Malin et al.

Part of JAMA Network Open, 2025

Article in journal

• DOI for Stability After Legal Gender Change Among Adults With Gender Dysphoria
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Immunogenetic diversity of MHC class II B-Lβ genes in Brazilian Caipiras (free-range) chickens laying blue eggs

da Veiga Lima Rosa Costamilan, Carlos André; Paludo, Ediane; Herkenhoff, Marcos Edgar; Pèrtille, Fábio et al.

Part of Frontiers in Immunology, 2025

Article in journal

• DOI for Immunogenetic diversity of MHC class II B-Lβ genes in Brazilian Caipiras (free-range) chickens laying blue eggs
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Long-term exposure to air pollution and road traffic noise in relation to dispensed antidepressant medications: A Swedish cohort study

Lu, Sai San Moon; Ekbäck, Erik; Sommar, Johan Nilsson; Anderson, Sara et al.

Part of Environmental Research, 2025

Article in journal

• DOI for Long-term exposure to air pollution and road traffic noise in relation to dispensed antidepressant medications: A Swedish cohort study
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Microorganisms in wild European reptiles: bridging gaps in neglected conditions to inform disease ecology research

Di Nicola, Matteo Riccardo; Rubiola, Selene; Cerullo, Anna; Basciu, Andrea et al.

Part of International Journal for Parasitology, 2025

Article, review/survey

• DOI for Microorganisms in wild European reptiles: bridging gaps in neglected conditions to inform disease ecology research
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Is the time right for transplanting immature testicular tissue or cells to restore male fertility?: Expert perspectives on clinical implementation of autotransplantation of cryopreserved testicular tissue or cells for fertility restoration

Safrai, Myriam; Goossens, Ellen; Mitchell, Rod T; Orwig, Kyle E et al.

Part of Baillière's Best Practice & Research, 2025

Article in journal

• DOI for Is the time right for transplanting immature testicular tissue or cells to restore male fertility?: Expert perspectives on clinical implementation of autotransplantation of cryopreserved testicular tissue or cells for fertility restoration
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The use of testicular organoids in advancing future treatments for male factor infertility

Stukenborg, Jan-Bernd

Part of Fertility and Sterility, p. 406-416, 2025

Article, review/survey

• DOI for The use of testicular organoids in advancing future treatments for male factor infertility
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Early transcriptional states of spermatogonia and marker expressions in the prepubertal human testis following chemotherapy-induced depletion

Ba Omar, Hajar; Stevens, Justine; Haavisto, Anu; Cui, Yanhua et al.

Part of Human Reproduction, p. 1467-1475, 2025

Article in journal

• DOI for Early transcriptional states of spermatogonia and marker expressions in the prepubertal human testis following chemotherapy-induced depletion
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ESHRE good practice recommendations on fertility preservation involving testicular tissue cryopreservation in children receiving gonadotoxic therapies

Mitchell, Rod T; Eguizabal, Cristina; Goossens, Ellen; Grynberg, Michael et al.

Part of Human Reproduction, p. 1391-1431, 2025

Article in journal

• DOI for ESHRE good practice recommendations on fertility preservation involving testicular tissue cryopreservation in children receiving gonadotoxic therapies
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Impact of Endocrine Disrupting Chemicals on Neurodevelopment: A Study of Glucocorticoid Receptor Signalling in the C17.2 Cell-Line

Eriksson, Annie

2025

Student thesis

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dCas12a-mediated CRISPR interference for multiplex gene repression in cyanobacteria for enhanced isobutanol and 3-methyl-1-butanol production

Xie, Hao; Bourgade, Barbara; Stensjö, Karin; Lindblad, Peter

Part of Microbial Cell Factories, 2025

Article in journal

• DOI for dCas12a-mediated CRISPR interference for multiplex gene repression in cyanobacteria for enhanced isobutanol and 3-methyl-1-butanol production
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Specific host factors determine resistance in a North American crayfish to the crayfish plague, Aphanomyces astaci

Wang, Yanhong; Ekblom, Charlotta; Kruangkum, Thanapong; Uribeondo, Javier Dieguez et al.

Part of Fish and Shellfish Immunology, 2025

Article in journal

• DOI for Specific host factors determine resistance in a North American crayfish to the crayfish plague, Aphanomyces astaci
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Developmental Neurotoxicity (DNT): A Call for Implementation of New Approach Methodologies for Regulatory Purposes: Summary of the 5th International Conference on DNT Testing

Celardo, Ivana; Aschner, Michael; Ashton, Randolph S.; Carstens, Kelly E. et al.

Part of Altex, p. 323-349, 2025

Article in journal

• DOI for Developmental Neurotoxicity (DNT): A Call for Implementation of New Approach Methodologies for Regulatory Purposes: Summary of the 5th International Conference on DNT Testing

Transcriptomic characterization of maturing neurons from human neural stem cells across developmental time points

Hosseini, Kimia; Philippot, Gaëtan; Salomonsson, Sara; Cediel Ulloa, Andrea et al.

Part of IBRO NEUROSCIENCE REPORTS, p. 679-689, 2025

Article in journal

• DOI for Transcriptomic characterization of maturing neurons from human neural stem cells across developmental time points
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The hematopoietic tissue of the freshwater crayfish, Pacifastacus leniusculus: organization and expression analysis

Kruangkum, Thanapong; Söderhäll, Kenneth; Söderhäll, Irene

Part of Cell and Tissue Research, p. 303-322, 2025

Article in journal

• DOI for The hematopoietic tissue of the freshwater crayfish, Pacifastacus leniusculus: organization and expression analysis
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Germ cell quantification in human fetal and prepubertal testis tissues: a comparison of current methodologies

Kearneye, Emma; Greenald, David; Matilionyte, Gabriele; Lane, Sheila et al.

Part of REPRODUCTION AND FERTILITY, 2025

Article in journal

• DOI for Germ cell quantification in human fetal and prepubertal testis tissues: a comparison of current methodologies

Phototropin connects blue light perception to starch metabolism in green algae

Yuan, Yizhong; Iannetta, Anthony A.; Kim, Minjae; Sadecki, Patric W. et al.

Part of Nature Communications, 2025

Article in journal

• DOI for Phototropin connects blue light perception to starch metabolism in green algae
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