Hugo Gutierrez de Teran
Professor at Department of Cell and Molecular Biology; Computational Biology and Bioinformatics
- Telephone:
- +46 18 471 50 56
- E-mail:
- Hugo.Gutierrez@icm.uu.se
- Visiting address:
- Husargatan 3
752 37 Uppsala - Postal address:
- Box 596
751 24 UPPSALA
Publications
Recent publications
Functional dynamics of G protein-coupled receptors reveal new routes for drug discovery
Part of Nature reviews. Drug discovery, p. 251-275, 2025
Part of Journal of Physical Chemistry B, p. 886-899, 2025
- DOI for Ligand and Residue Free Energy Perturbations Solve the Dual Binding Mode Proposal for an A2BAR Partial Agonist
- Download full text (pdf) of Ligand and Residue Free Energy Perturbations Solve the Dual Binding Mode Proposal for an A2BAR Partial Agonist
Part of Nature Communications, 2025
- DOI for Large scale investigation of GPCR molecular dynamics data uncovers allosteric sites and lateral gateways
- Download full text (pdf) of Large scale investigation of GPCR molecular dynamics data uncovers allosteric sites and lateral gateways
Part of Journal of Biological Chemistry, 2024
- DOI for Interaction networks within disease-associated GaS variants characterized by an integrative biophysical approach
- Download full text (pdf) of Interaction networks within disease-associated GaS variants characterized by an integrative biophysical approach
Memprot.GPCR-ModSim: modelling and simulation of membrane proteins in a nutshell
Part of Bioinformatics, 2024
- DOI for Memprot.GPCR-ModSim: modelling and simulation of membrane proteins in a nutshell
- Download full text (pdf) of Memprot.GPCR-ModSim: modelling and simulation of membrane proteins in a nutshell
All publications
Articles in journal
Part of Journal of Physical Chemistry B, p. 886-899, 2025
- DOI for Ligand and Residue Free Energy Perturbations Solve the Dual Binding Mode Proposal for an A2BAR Partial Agonist
- Download full text (pdf) of Ligand and Residue Free Energy Perturbations Solve the Dual Binding Mode Proposal for an A2BAR Partial Agonist
Part of Nature Communications, 2025
- DOI for Large scale investigation of GPCR molecular dynamics data uncovers allosteric sites and lateral gateways
- Download full text (pdf) of Large scale investigation of GPCR molecular dynamics data uncovers allosteric sites and lateral gateways
Part of Journal of Biological Chemistry, 2024
- DOI for Interaction networks within disease-associated GaS variants characterized by an integrative biophysical approach
- Download full text (pdf) of Interaction networks within disease-associated GaS variants characterized by an integrative biophysical approach
Memprot.GPCR-ModSim: modelling and simulation of membrane proteins in a nutshell
Part of Bioinformatics, 2024
- DOI for Memprot.GPCR-ModSim: modelling and simulation of membrane proteins in a nutshell
- Download full text (pdf) of Memprot.GPCR-ModSim: modelling and simulation of membrane proteins in a nutshell
Benzylhydroxamic acids as inhibitors of insulin regulated aminopeptidase (IRAP)
Part of European Journal of Medicinal Chemistry Reports, 2024
- DOI for Benzylhydroxamic acids as inhibitors of insulin regulated aminopeptidase (IRAP)
- Download full text (pdf) of Benzylhydroxamic acids as inhibitors of insulin regulated aminopeptidase (IRAP)
N-(Heteroaryl)thiophene sulfonamides as angiotensin AT2 receptor ligands
Part of European Journal of Medicinal Chemistry, 2024
- DOI for N-(Heteroaryl)thiophene sulfonamides as angiotensin AT2 receptor ligands
- Download full text (pdf) of N-(Heteroaryl)thiophene sulfonamides as angiotensin AT2 receptor ligands
Part of Biomedicine and Pharmacotherapy, 2024
- DOI for Exploring Biginelli-based scaffolds as A2B adenosine receptor antagonists: Unveiling novel structure-activity relationship trends, lead compounds, and potent colorectal anticancer agents
- Download full text (pdf) of Exploring Biginelli-based scaffolds as A2B adenosine receptor antagonists: Unveiling novel structure-activity relationship trends, lead compounds, and potent colorectal anticancer agents
Part of Journal of Medicinal Chemistry, p. 890-912, 2023
- DOI for Exploring the Effect of Halogenation in a Series of Potent and Selective A2B Adenosine Receptor Antagonists
- Download full text (pdf) of Exploring the Effect of Halogenation in a Series of Potent and Selective A2B Adenosine Receptor Antagonists
Slow conformational dynamics of the human A(2A) adenosine receptor are temporally ordered
Part of Structure, p. 329, 2022
Pan-cancer functional analysis of somatic mutations in G protein-coupled receptors
Part of Scientific Reports, 2022
- DOI for Pan-cancer functional analysis of somatic mutations in G protein-coupled receptors
- Download full text (pdf) of Pan-cancer functional analysis of somatic mutations in G protein-coupled receptors
Exploring Non-orthosteric Interactions with a Series of Potent and Selective A(3) Antagonists
Part of ACS Medicinal Chemistry Letters, p. 243-249, 2022
- DOI for Exploring Non-orthosteric Interactions with a Series of Potent and Selective A(3) Antagonists
- Download full text (pdf) of Exploring Non-orthosteric Interactions with a Series of Potent and Selective A(3) Antagonists
Part of Journal of Medicinal Chemistry, p. 2091-2106, 2022
- DOI for Optimization of 2-Amino-4,6-diarylpyrimidine-5-carbonitriles as Potent and Selective A(1) Antagonists
- Download full text (pdf) of Optimization of 2-Amino-4,6-diarylpyrimidine-5-carbonitriles as Potent and Selective A(1) Antagonists
Part of Journal for ImmunoTherapy of Cancer, 2022
- DOI for A2B adenosine receptor antagonists rescue lymphocyte activity in adenosine-producing patient-derived cancer models
- Download full text (pdf) of A2B adenosine receptor antagonists rescue lymphocyte activity in adenosine-producing patient-derived cancer models
Part of Frontiers in Molecular Biosciences, 2021
- DOI for Structural Basis of Inhibition of Human Insulin-Regulated Aminopeptidase (IRAP) by Benzopyran-based Inhibitors
- Download full text (pdf) of Structural Basis of Inhibition of Human Insulin-Regulated Aminopeptidase (IRAP) by Benzopyran-based Inhibitors
Part of Journal of Medicinal Chemistry, p. 8710-8726, 2021
Part of Journal of enzyme inhibition and medicinal chemistry (Print), p. 1553-1563, 2021
- DOI for Design, synthesis, HER2 inhibition and anticancer evaluation of new substituted 1,5-dihydro-4,1-benzoxazepines
- Download full text (pdf) of Design, synthesis, HER2 inhibition and anticancer evaluation of new substituted 1,5-dihydro-4,1-benzoxazepines
Physiological, Pathological Roles and Pharmacology of Insulin Regulated Aminopeptidase: Editorial
Part of Frontiers in Molecular Biosciences, 2021
- DOI for Physiological, Pathological Roles and Pharmacology of Insulin Regulated Aminopeptidase: Editorial
- Download full text (pdf) of Physiological, Pathological Roles and Pharmacology of Insulin Regulated Aminopeptidase: Editorial
Part of PloS Computational Biology, 2021
- DOI for Deciphering conformational selectivity in the A(2A) adenosine G protein-coupled receptor by free energy simulations
- Download full text (pdf) of Deciphering conformational selectivity in the A(2A) adenosine G protein-coupled receptor by free energy simulations
Part of Scientific Reports, 2021
- DOI for Identification of V6.51L as a selectivity hotspot in stereoselective A(2B) adenosine receptor antagonist recognition
- Download full text (pdf) of Identification of V6.51L as a selectivity hotspot in stereoselective A(2B) adenosine receptor antagonist recognition
Part of Journal of Medicinal Chemistry, p. 458-480, 2021
Part of Journal of Medicinal Chemistry, p. 12938-12963, 2021
- DOI for Potent Inhibition of Nicotinamide N-Methyltransferase by Alkene-Linked Bisubstrate Mimics Bearing Electron Deficient Aromatics
- Download full text (pdf) of Potent Inhibition of Nicotinamide N-Methyltransferase by Alkene-Linked Bisubstrate Mimics Bearing Electron Deficient Aromatics
N-(Methyloxycarbonyl)thiophene sulfonamides as high affinity AT2 receptor ligands
Part of Bioorganic & Medicinal Chemistry, 2021
Part of Angewandte Chemie International Edition, p. 16536-16543, 2020
GPCRmd uncovers the dynamics of the 3D-GPCRome
Part of Nature Methods, p. 777-787, 2020
Part of Journal of Medicinal Chemistry, p. 7721-7739, 2020
Part of Biomolecules, 2020
- DOI for Evolution of Angiotensin Peptides and Peptidomimetics as Angiotensin II Receptor Type 2 (AT2) Receptor Agonists
- Download full text (pdf) of Evolution of Angiotensin Peptides and Peptidomimetics as Angiotensin II Receptor Type 2 (AT2) Receptor Agonists
Part of European Journal of Pharmacology, 2020
Macrocyclic Peptidomimetics as Inhibitors of Insulin-Regulated Aminopeptidase (IRAP)
Part of RSC Medicinal chemistry, p. 234-244, 2020
Part of ChemistryOpen, p. 325-337, 2020
- DOI for Synthesis, Evaluation and Proposed Binding Pose of Substituted Spiro-Oxindole Dihydroquinazolinones as IRAP Inhibitors
- Download full text (pdf) of Synthesis, Evaluation and Proposed Binding Pose of Substituted Spiro-Oxindole Dihydroquinazolinones as IRAP Inhibitors
Free energy calculations of RNA interactions
Part of Methods, p. 85-95, 2019
Part of Neuropeptides, 2019
- DOI for Functional characterization in vitro of twelve naturally occurring variants of the human pancreatic polypeptide receptor NPY4R
- Download full text (pdf) of Functional characterization in vitro of twelve naturally occurring variants of the human pancreatic polypeptide receptor NPY4R
QligFEP: an automated workflow for small molecule free energy calculations in Q
Part of Journal of Cheminformatics, 2019
- DOI for QligFEP: an automated workflow for small molecule free energy calculations in Q
- Download full text (pdf) of QligFEP: an automated workflow for small molecule free energy calculations in Q
QresFEP: An Automated Protocol for Free Energy Calculations of Protein Mutations in Q
Part of Journal of Chemical Theory and Computation, p. 5461-5473, 2019
Part of ChemistryOpen, p. 114-125, 2019
- DOI for A Series of Analogues to the AT2R Prototype Antagonist C38 Allow Fine Tuning of the Previously Reported Antagonist Binding Mode
- Download full text (pdf) of A Series of Analogues to the AT2R Prototype Antagonist C38 Allow Fine Tuning of the Previously Reported Antagonist Binding Mode
Inhibition of translation termination by small molecules targeting ribosomal release factors
Part of Scientific Reports, 2019
- DOI for Inhibition of translation termination by small molecules targeting ribosomal release factors
- Download full text (pdf) of Inhibition of translation termination by small molecules targeting ribosomal release factors
Free-Energy Calculations for Bioisosteric Modifications of A(3) Adenosine Receptor Antagonists
Part of International Journal of Molecular Sciences, 2019
- DOI for Free-Energy Calculations for Bioisosteric Modifications of A(3) Adenosine Receptor Antagonists
- Download full text (pdf) of Free-Energy Calculations for Bioisosteric Modifications of A(3) Adenosine Receptor Antagonists
Part of Journal of Medicinal Chemistry, p. 9315-9330, 2019
Molecular mechanisms in the selectivity of nonsteroidal anti-inflammatory drugs
Part of Biochemistry, p. 1236-1248, 2018
Part of Molecular Pharmacology, p. 323-334, 2018
- DOI for Elucidation of the Binding Mode of the Carboxyterminal Region of Peptide YY to the Human Y-2 Receptor
- Download full text (pdf) of Elucidation of the Binding Mode of the Carboxyterminal Region of Peptide YY to the Human Y-2 Receptor
Structural Basis of Inhibition of Human Insulin-Regulated Aminopeptidase (IRAP) by Aryl Sulfonamides
Part of ACS Omega, p. 4509-4521, 2018
- DOI for Structural Basis of Inhibition of Human Insulin-Regulated Aminopeptidase (IRAP) by Aryl Sulfonamides
- Download full text (pdf) of Structural Basis of Inhibition of Human Insulin-Regulated Aminopeptidase (IRAP) by Aryl Sulfonamides
Part of Journal of Biological Chemistry, p. 11481-11490, 2018
- DOI for Structural mechanism of AadA, a dual specificity aminoglycoside adenylyltransferase from Salmonella enterica
- Download full text (pdf) of Structural mechanism of AadA, a dual specificity aminoglycoside adenylyltransferase from Salmonella enterica
Probing the Time Dependency of Cyclooxygenase-1 Inhibitors by Computer Simulations
Part of Biochemistry, p. 1911-1920, 2017
Structure-Based Design of Potent and Selective Ligands at the Four Adenosine Receptors
Part of Molecules, 2017
- DOI for Structure-Based Design of Potent and Selective Ligands at the Four Adenosine Receptors
- Download full text (pdf) of Structure-Based Design of Potent and Selective Ligands at the Four Adenosine Receptors
Part of ChemistrySelect, p. 4920-4933, 2017
Part of Scientific Reports, 2017
- DOI for The GPR139 reference agonists 1a and 7c, and tryptophan and phenylalanine share a common binding site
- Download full text (pdf) of The GPR139 reference agonists 1a and 7c, and tryptophan and phenylalanine share a common binding site
Part of Journal of Medicinal Chemistry, p. 7502-7511, 2017
Part of Journal of Medicinal Chemistry, p. 3372-3382, 2017
Part of Chemistry of Heterocyclic Compounds, p. 316-321, 2017
Part of Molecular Pharmacology, p. 413-424, 2016
Part of ACS Chemical Neuroscience, p. 1383-1392, 2016
Structural determinants of subtype selectivity and functional activity of angiotensin II receptors
Part of Bioorganic & Medicinal Chemistry Letters, p. 1355-1359, 2016
Part of Proteins, p. 1534-1548, 2016
Discovery of Potent and Highly Selective A(2B) Adenosine Receptor Antagonist Chemotypes
Part of Journal of Medicinal Chemistry, p. 1967-1983, 2016
Part of Journal of Medicinal Chemistry, p. 5922-5928, 2016
GPCR-ModSim: A comprehensive web based solution for modeling G-protein coupled receptors
Part of Nucleic Acids Research, 2016
- DOI for GPCR-ModSim: A comprehensive web based solution for modeling G-protein coupled receptors
- Download full text (pdf) of GPCR-ModSim: A comprehensive web based solution for modeling G-protein coupled receptors
Origin of the Enigmatic Stepwise Tight-Binding Inhibition of Cyclooxygenase-1
Part of Biochemistry, p. 7283-7291, 2015
Understanding ligand binding and receptor selectivity through molecular simulations
Part of European Biophysics Journal, 2015
Pyrazin-2(1H)-ones as a novel class of selective A3 adenosine receptor antagonists
Part of Future Medicinal Chemistry, p. 1373-1380, 2015
Part of MedChemComm, p. 1178-1185, 2015
Free energy calculations of A(2A) adenosine receptor mutation effects on agonist binding
Part of Chemical Communications, p. 3522-3525, 2015
Sodium Ion Binding Pocket Mutations and Adenosine A(2A) Receptor Function
Part of Molecular Pharmacology, p. 305-313, 2015
Part of International Journal of Biochemistry and Cell Biology, p. 245-254, 2014
Part of PloS Computational Biology, 2014
- DOI for Computational prediction of alanine scanning and ligand binding energetics in G-protein coupled receptors
- Download full text (pdf) of Computational prediction of alanine scanning and ligand binding energetics in G-protein coupled receptors
Part of Journal of Chemical Information and Modeling, p. 1488-1499, 2014
Structure-Based Design of New KSP-Eg5 Inhibitors Assisted by a Targeted Multicomponent Reaction
Part of ChemBioChem, p. 1471-1480, 2014
Part of PLOS ONE, 2014
- DOI for Structural and Energetic Effects of A2A Adenosine Receptor Mutations on Agonist and Antagonist Binding
- Download full text (pdf) of Structural and Energetic Effects of A2A Adenosine Receptor Mutations on Agonist and Antagonist Binding
Part of Future Medicinal Chemistry, p. 251-254, 2014
Part of Basic & Clinical Pharmacology & Toxicology, p. 22-22, 2014
Part of ACS Medicinal Chemistry Letters, p. 1031-1036, 2013
Part of Biochemistry, p. 7987-7998, 2013
Characterization of the dynamic events of GPCRs by automated computational simulations
Part of Biochemical Society Transactions, p. 205-212, 2013
Part of Structure, p. 2175-2185, 2013
Part of Neuropeptides, p. 293-300, 2011
Part of Journal of Chemical Information and Modeling, p. 601-611, 2011
Part of Regulatory Peptides, p. 120-129, 2010
Part of British Journal of Pharmacology, p. 1069-1081, 2010
Part of Bioorganic & Medicinal Chemistry, p. 5933-5949, 2009
Computational inhibitor design against malaria plasmepsins
Part of Cellular and Molecular Life Sciences (CMLS), p. 2285-2305, 2007
Macrocyclic inhibitors of the malarial aspartic proteases plasmepsin I, II, and IV
Part of Biorganic & Medicinal Chemistry, p. 2197-2208, 2006
Computational analysis of plasmepsin IV bound to an allophenylnorstatine inhibitor
Part of FEBS Letters, p. 5910-5916, 2006
Inhibitor binding to the Plasmepsin IV aspartic protease from Plasmodium falciparum
Part of Biochemistry, p. 10529-10541, 2006
Macrocyclic inhibitors of the malarial aspartic proteases plasmepsin I, II, and IV
Part of Bioorganic & Medicinal Chemistry, p. 2197-2208, 2006
Comparative analysis of putative agonist-binding modes in the human A1 adenosine
Part of Chembiochem, p. 841-9, 2004
Articles, review/survey
Functional dynamics of G protein-coupled receptors reveal new routes for drug discovery
Part of Nature reviews. Drug discovery, p. 251-275, 2025
Structural Mapping of Adenosine Receptor Mutations: Ligand Binding and Signaling Mechanisms
Part of TIPS - Trends in Pharmacological Sciences, p. 75-89, 2018
Structure-Based Rational Design of Adenosine Receptor Ligands
Part of Current Topics in Medicinal Chemistry, p. 40-58, 2017
Chapters in book
Free energy calculations for protein-ligand binding prediction
Part of Protein-Ligand Interactions and Drug Design, p. 203-226, Springer Nature, 2021
Characterization of Ligand Binding to GPCRs Through Computational Methods
Part of Computational Methods for GPCR Drug Discovery, p. 23-44, Humana Press, 2018