Eva Lindström
Professor at Department of Ecology and Genetics; Limnology
- Telephone:
- +46 18 471 64 97
- E-mail:
- Eva.Lindstrom@ebc.uu.se
- Visiting address:
- Evolutionsbiologiskt centrum (EBC)
Norbyvägen 18 D
752 36 Uppsala - Postal address:
- Norbyvägen 18 D
752 36 Uppsala
Download contact information for Eva Lindström at Department of Ecology and Genetics; Limnology
- CV:
- Download CV
- ORCID:
- 0000-0001-8920-3071
More information is available to staff who log in.
Short presentation
The diversity of bacteria and other microorganisms in nature is enormous. Due to the usage of molecular tools, we now know that these communities change over time and space, but we don’t know why and if it matters for their role in ecosystems. In other words we lack basic knowledge about microbial ecology, and we don’t know if it is fundamentally different compared to ecology of other organisms. This is what I want to find out!
Keywords
- bacteria
- diversity
- lake
- limnology
Biography
Since 2013 I am a professor in Biology at Uppsala University at the Limnology program, where I am also a part of the Microbial Ecology group.
Previous achievements include a PhD degree in Limnology at Uppsala University in 1999, and a Docent title from the same university in 2004. I have held two postdoc positions, one in 1999-2000 at the Department of Limnology of the Austrian Academy of Sciences and one in 2004 at Université du Québec à Montréal.
During my time at Uppsala University I have been teaching corresponding to 10-50% of a full time position including course development and responsibility for 9 different undergraduate and Masters courses. I have done more than 400 hours of lectures in such courses.
Courses I currently teach as course coordinator:
Vattenvård (in Swedish)
Östersjöns miljö/The Baltic Sea environment (in Swedish and English)
I am also a member of the teacher team of the following courses:
Biodiversity and ecosystem functioning
Organismernas evolution och mångfald (in Swedish)
Biologi A (in Swedish)
Mikroorganismers liv och interaktioner (in Swedish)
Research
Two questions are central for my research:
1) Which factors are shaping microbial diversity?
2) Does the function of the microbial community in the ecosystem depend on the diversity or community composition?
My projects
I am currently recruiting a PhD student!
My research is in microbial biogeography and the role of microorganisms in lake ecosystems.
The following questions are addressed in current and recent projects:
1) How important is dispersal of bacterial cells for bacterial community composition and functioning? Can massive dispersal of cells (mass effects) over shadow environmental steering factors for community composition? Is the sequence of dispersal of importance due to so called priority and monopolization effects? What about stochastic processes such as drift? Does the importance of these factors differ over season, among lakes of different types and among organism groups? What are the consequences of dispersal and community assembly for the functioning of microbial communities?
2) How important is photoheterotrophy for the role of bacteria and archaea in lake ecosystems? Phhotoheterotrophy means that light can be used as an energy source in other ways than through photosynthesis. However, we know very little about this process, especially in lakes.
In general, questions about biogeography and biodiversity-ecosystem function relationships have been little addressed in microbial communities due to methodological constraints. Today we use novel DNA-sequencing techniques. This development has opened up the door for a new set of questions since diversity can be analysed to a great precision and depth. Finally we can address the over-all question of if microorganism biogeography and biodiversity follow similar rules as that of larger organisms or if they are fundamentally different. Only future will tell if this information will make us rewrite ecology textbooks!
Further, this research aims to increase our understanding of the role of microorganisms in ecosystems, where they play central roles in for instance carbon cycling. Thus, my research deals with the small players with global impact.
Recent and current projects have been made possible by financial support from for instance Vetenskapsrådet, The Wenner-Gren foundation, Carl Tryggers Stiftelse för Vetenskaplig forskning, Stiftelsen Oscar och Lili Lamms minne, Biodiversa, the Åforsk foundation and Stiftelsen Olle Engkvist Byggmästare.
See also my google scholar profile.
Group members
PhD students:
Sofia Papadopoulou (ecosystem consequences of dispersal)
Berenike Bick (community assembly, main supervisor Silke Langenheder)
Previous group members (selection):
Jürg Brendan Logue (PhD student, biogeography)
David Lymer (PhD student, viral ecology)
Martin Andersson (PhD student, bacterial diversity-ecosystem relationships)
Xinmei Feng (postdoc, biogeography)
Jérôme Comte (postdoc, biogeography)
Ina Severin (postdoc, diversity and function from a biogeography perspective)
Johanna Sjöstedt (postdoc Microbial diversity and ecosystem functioning)
Karen Lebret (postdoc Ecological tipping points, bacteria and phytoplankton interactions)
Sophia Renes (Ph D student, Resilience of microbial communities, SLU)
Karla Münzner (Ph D student, causes and consequences of algal blooms)
Ingrid Sassenhagen (postdoc, parasites of phytoplankton blooms)
Theresa Lumpi (PhD student, community assembly)
Josefin Nilsson (PhD student, Högskolan i Halmstad)
Publications
Selection of publications
- Ciliate Grazing on the Bloom-Forming Microalga Gonyostomum semen (2024)
- Nutrient availability and grazing influence the strength of priority effects during freshwater bacterial community coalescence (2023)
- High Iron Requirements for Growth in the Nuisance Alga Gonyostomum semen (Raphidophyceae) (2021)
- Factors influencing aquatic and terrestrial bacterial community assembly (2019)
- High abundances of the nuisance raphidophyte Gonyostomum semen in brown water lakes are associated with high concentrations of iron (2018)
- Dispersal timing determines the importance of priority effects in bacterial communities (2018)
- Contribution of different bacterial dispersal sources to lakes (2017)
- Remnants of marine bacterial communities can be retrieved from deep sediments in lakes of marine origin (2016)
- Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter (2016)
- Variable Effects of Dispersal on Productivity of Bacterial Communities Due to Changes in Functional Trait Composition (2013)
- Local and regional factors influencing bacterial community assembly (2012)
- Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species-area relationships (2012)
- The Importance of Dispersal for Bacterial Community Composition and Functioning (2011)
- Regional invariance among microbial communities (2010)
Recent publications
- Ciliate Grazing on the Bloom-Forming Microalga Gonyostomum semen (2024)
- Nutrient availability and grazing influence the strength of priority effects during freshwater bacterial community coalescence (2023)
- Carbon dioxide reduction by photosynthesis undetectable even during phytoplankton blooms in two lakes (2023)
- Infection strategies of different chytrids in a diatom spring bloom (2023)
- High Iron Requirements for Growth in the Nuisance Alga Gonyostomum semen (Raphidophyceae) (2021)
All publications
Articles
- Ciliate Grazing on the Bloom-Forming Microalga Gonyostomum semen (2024)
- Nutrient availability and grazing influence the strength of priority effects during freshwater bacterial community coalescence (2023)
- Carbon dioxide reduction by photosynthesis undetectable even during phytoplankton blooms in two lakes (2023)
- Infection strategies of different chytrids in a diatom spring bloom (2023)
- High Iron Requirements for Growth in the Nuisance Alga Gonyostomum semen (Raphidophyceae) (2021)
- Comprehensive analysis of chemical and biological problems associated with browning agents used in aquatic studies (2021)
- Warming mediates the resistance of aquatic bacteria to invasion during community coalescence (2021)
- Streamlined and Abundant Bacterioplankton Thrive in Functional Cohorts (2020)
- Using null models to compare bacterial and microeukaryotic metacommunity assembly under shifting environmental conditions (2020)
- Different Roles of Environmental Selection, Dispersal, and Drift in the Assembly of Intestinal Microbial Communities of Freshwater Fish With and Without a Stomach (2020)
- Factors influencing aquatic and terrestrial bacterial community assembly (2019)
- Effects of sterilization on dissolved organic carbon (DOC) composition and bacterial utilization of DOC from lakes (2018)
- Decomposing multiple dimensions of stability in global change experiments (2018)
- Increased water colour affects freshwater plankton communities in a mesocosm study (2018)
- High abundances of the nuisance raphidophyte Gonyostomum semen in brown water lakes are associated with high concentrations of iron (2018)
- Sharing of photobionts in sympatric populations of Thamnolia and Cetraria lichens (2018)
- Repeated disturbances affect functional but not compositional resistance and resilience in an aquatic bacterioplankton community (2018)
- Dispersal timing determines the importance of priority effects in bacterial communities (2018)
- Contribution of different bacterial dispersal sources to lakes (2017)
- Contribution of different dispersal sources to the metabolic response of lake bacterioplankton following a salinity change (2017)
- Progress and perspectives in aquatic microbial ecology (2017)
- Influence of pulsed and continuous substrate inputs on freshwater bacterial community composition and functioning in bioreactors (2017)
- Microbes as Engines of Ecosystem Function (2016)
- Remnants of marine bacterial communities can be retrieved from deep sediments in lakes of marine origin (2016)
- Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter (2016)
- Combined effects of zooplankton grazing and dispersal on the diversity and assembly mechanisms of bacterial metacommunities (2015)
- The spatial structure of bacterial communities is influenced by historical environmental conditions (2014)
- Can marine bacteria be recruited from freshwater sources and the air? (2014)
- Relationships between Bacterial Community Composition, Functional Trait Composition and Functioning Are Context Dependent – but What Is the Context? (2014)
- Unveiling Distribution Patterns of Freshwater Phytoplankton by a Next Generation Sequencing Based Approach (2013)
- Biogeography of bacterial communities exposed to progressive long-term environmental change (2013)
- Variable Effects of Dispersal on Productivity of Bacterial Communities Due to Changes in Functional Trait Composition (2013)
- Unraveling assembly of stream biofilm communities (2012)
- Local and regional factors influencing bacterial community assembly (2012)
- Freshwater bacterioplankton richness in oligotrophic lakes depends on nutrient availability rather than on species-area relationships (2012)
- Which sequencing depth is sufficient to describe patterns in bacterial a- and b-diversity? (2012)
- Importance of space and the local environment for linking local and regional abundances of microbes (2012)
- The Importance of Dispersal for Bacterial Community Composition and Functioning (2011)
- Function-specific response to depletion of microbial diversity (2011)
- Ubiquity of Polynucleobacter necessarius ssp asymbioticus in lentic freshwater habitats of a heterogenous 2000 km2 area (2010)
- The interplay between bacterial community composition and the environment determining function of inland water bacteria (2010)
- Changing phosphorus concentration and subsequent prophage induction alter composition of a freshwater viral assemblage (2010)
- Regional invariance among microbial communities (2010)
- Composition and dispersal of riverine and lake phytoplankton communities in connected systems with different hydraulic retention times (2008)
- Biogeography of bacterioplankton in inland waters. (2008)
- Variable importance of viral-induced bacterial mortality along gradients of trophic status and humic content in lakes (2008)
- Changing importance of viral induced bacterial mortality in lakes, along gradients in trophic status and humic content (2008)
- Temporal variation in freshwater viral and bacterial community composition (2008)
- Does ecosystem size determine aquatic bacterial richness? Comment (2007)
- First evidence for a bipolar distribution of dominant freshwater lake bacterioplankton (2007)
- The role of environmental and spatial processes in structuring lake communities from bacteria to fish (2006)
- Influence of dissolved organic matter source on lake bacterioplankton community structure and function (2006)
- Structure and function of bacterial communities emerging from different sources under identical conditions. (2006)
- External control of bacterial community structure in lakes. (2006)
- Weak coupling between community composition and functioning of aquatic bacteria (2005)
- Distribution of typical freshwater bacterial groups is associated with pH, temperature and lake water retention time. (2005)
- Community composition of bacterioplankton and cell transport in lakes in two different drainage areas. (2005)
- Production and food web interactions of Arctic freshwater plankton and responses to increased DOC (2004)
- Growth dynamics within bacterial communities in riverine and estuarine batch cultures (2004)
- Influence of inlet bacteria on bacterioplankton assemblage composition in lakes of different hydraulic retention time (2004)
- Response of a member of the Verrucomicrobia, among the dominating bacteria in a hypolimnion, to increased phosphorus availability (2004)
- Live sorting and survival of unstained and DAPI-stained ciliates by flow cytometry (2003)
- Viral and Bacterioplankton Dynamics in Two Lakes with Different Humic Contents (2003)
- Rapid Screening for Freshwater Bacterial Groups by Using Reverse Line Blot Hybridization (2003)
- Do neighboring lakes share common taxa of bacterioplankton? Comparison of16S rDNA fingerprints and sequencesfrom three geographic regions (2002)
- Enumeration of small ciliates in culture by flow cytometry and nucleic acid staining (2002)
- Interactive effect of temperature and food concentration on growth rate: A test case using the small freshwater ciliate Urotricha farcta (2002)
- Investigating Influential Factors on BacterioplanktonCommunity Composition: Results from a Field Study of Five Mesotrophic Lakes (2001)
- Bacterioplankton community composition in five lakes differing in trophic status and humic content (2000)
- Bacterioplankton community composition in a boreal forest lake (1998)
- Bacterioplankton community composition in a boreal forest lake (1998)
Chapters
Data sets
- High abundances of Gonyostomum semen in brown water lakes are associated with high concentrations of iron (2018)
- Increased water colour affects freshwater plankton communities but not ecosystem functions in a mesocosm study (2017)
- Supporting data (2017)
- Repeated disturbances affect functional but not compositional resistance and resilience in aquatic bacterioplankton communities - supporting data (2017)
- Supporting data version 2 (2017)
- Effects of sterilization on composition and bacterial utilization of dissolved organic carbon (2017)
- Effects of sterilization on composition and bacterial utilization of dissolved organic carbon (2017)