Mowbray lab

We study how proteins look at the atomic level, and try to understand how that allows them to carry out their many different functions in biology. The overall goal is to apply this information to do useful and interesting things. In most projects we look for small molecules that bind to and block the activity of enzymes important for particular pathogens, and which might be developed into drugs to kill those pathogens.
Popular science presentation
Disease-causing microorganisms place a huge burden on the people of the world. One example is Plasmodium falciparum, the parasite that causes malaria. The World Health Organization (WHO) estimates that a million people, mostly small children in Africa, die of malaria each year, and that half of the world’s population lives in areas where the risk of contracting the disease is high. Another striking example is Mycobacterium tuberculosis, which is thought to infect one-third of world’s population, albeit in an inactive form. When activated, these bacteria cause tuberculosis, which kills approximately 1.4 million people every year. These two diseases are important causes of poverty and suffering in the third world, and the increasing resistance of the relevant pathogens to the available drugs worsens the situation considerably. New drugs are urgently needed, yet there is little incentive for pharmaceutical companies to invest in developing drugs from which they can expect little or no profit. It is therefore important for academic laboratories to take on some of the burden; projects carried out in collaboration with industrial partners seem to offer the best way forward.
More interesting for big pharma, and a more tangible threat for those living in industrialized countries, are the so-called ESKAPE pathogens. These antibiotic-resistant bacteria cause the majority of infections acquired by patients in conjunction with hospital care. Such infections are particularly sinister, since admission to a hospital is intended to cure the patient, not give them an even worse illness than they had upon arrival!
In our lab, we focus on enzymes (catalytic proteins) that pathogens require, but which are not found in humans. We clone, express and purify sufficient quantities of the chosen proteins, and study how they look using a method called X-ray crystallography. In parallel, we try to identify small molecules (inhibitors) that block the function of the pathogen’s enzymes, without harmful effects on the human host. We also design completely new inhibitor molecules, using our knowledge about how the enzymes look, and seek others using high-throughput screening.
Group members
Publications
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Part of Proceedings of the National Academy of Sciences of the United States of America, 2024
- DOI for Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria
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Part of European Journal of Medicinal Chemistry, 2024
- DOI for Design, synthesis, and in vitro biological evaluation of meta-sulfonamidobenzamide-based antibacterial LpxH inhibitors
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Part of Bioorganic & Medicinal Chemistry Letters, 2024
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Bacterial type I signal peptidase inhibitors-Optimized hits from nature
Part of European Journal of Medicinal Chemistry, 2022
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Part of ACS - Infectious Diseases, p. 482-498, 2022
- DOI for Synthesis and in vitro biological evaluation of quinolinyl pyrimidines targeting type II NADH-dehydrogenase (NDH-2)
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Part of European Journal of Medicinal Chemistry, 2021
- DOI for Antibacterial sulfonimidamide-based oligopeptides as type I signal peptidase inhibitors: Synthesis and biological evaluation
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Part of European Journal of Medicinal Chemistry, p. 1346-1360, 2018
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Part of Bioorganic & Medicinal Chemistry, p. 897-911, 2017
- DOI for Design, synthesis and in vitro biological evaluation of oligopeptides targeting E. coli type I signal peptidase (LepB)
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Part of Molecular Microbiology, p. 13-25, 2017
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Part of ChemMedChem, p. 2024-2036, 2016
- DOI for Targeting an Aromatic Hotspot in Plasmodium falciparum 1-Deoxy-d-xylulose-5-phosphate Reductoisomerase with -Arylpropyl Analogues of Fosmidomycin
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Expanding the catalytic triad in epoxide hydrolases and related enzymes
Part of ACS Catalysis, p. 5702-5713, 2015
- DOI for Expanding the catalytic triad in epoxide hydrolases and related enzymes
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Part of ChemistryOpen, p. 342-362, 2015
- DOI for Optimization and Evaluation of 5-Styryl-Oxathiazol-2-one Mycobacterium tuberculosis Proteasome Inhibitors as Potential Antitubercular Agents
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Part of Journal of Medicinal Chemistry, p. 2988-3001, 2015
- DOI for Synthesis and Bioactivity of beta-Substituted Fosmidomycin Analogues Targeting 1-Deoxy-D-xylulose-5-phosphate Reductoisomerase
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Part of Bioscience Reports, p. 865-877, 2014
- DOI for Arabidopsis cytosolic acyl-CoA-binding proteins ACBP4, ACBP5 and ACBP6 have overlapping but distinct roles in seed development
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DXR Inhibition by Potent Mono- and Disubstituted Fosmidomycin Analogues
Part of Journal of Medicinal Chemistry, p. 6190-6199, 2013
- DOI for DXR Inhibition by Potent Mono- and Disubstituted Fosmidomycin Analogues
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Structural studies on Mycobacterium tuberculosis DXR in complex with the antibiotic FR-900098
Part of Acta Crystallographica Section D, p. 134-143, 2012
- DOI for Structural studies on Mycobacterium tuberculosis DXR in complex with the antibiotic FR-900098
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Part of MedChemComm, p. 620-626, 2012
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Trisubstituted Imidazoles as Mycobacterium tuberculosis Glutamine Synthetase Inhibitors
Part of Journal of Medicinal Chemistry, p. 2894-2898, 2012
- DOI for Trisubstituted Imidazoles as Mycobacterium tuberculosis Glutamine Synthetase Inhibitors
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Part of Journal of Medicinal Chemistry, p. 4964-4976, 2011
- DOI for Design, Synthesis, and X-ray Crystallographic Studies of alpha-Aryl Substituted Fosmidomycin Analogues as Inhibitors of Mycobacterium tuberculosis 1-Deoxy-D-xylulose 5-Phosphate Reductoisomerase
- Download full text (pdf) of Design, Synthesis, and X-ray Crystallographic Studies of alpha-Aryl Substituted Fosmidomycin Analogues as Inhibitors of Mycobacterium tuberculosis 1-Deoxy-D-xylulose 5-Phosphate Reductoisomerase
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Part of Plant Molecular Biology, p. 33-45, 2011
- DOI for Expression and beta-glucan binding properties of Scots pine (Pinus sylvestris L.) antimicrobial protein (Sp-AMP)
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Structural and functional studies of mycobacterial IspD enzymes
Part of Acta Crystallographica Section D, p. 403-414, 2011
- DOI for Structural and functional studies of mycobacterial IspD enzymes
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Part of The FEBS Journal, p. 793-808, 2011
- DOI for Structures of type B ribose 5-phosphate isomerase from Trypanosoma cruzi shed light on the determinants of sugar specificity in the structural family
- Download full text (pdf) of Structures of type B ribose 5-phosphate isomerase from Trypanosoma cruzi shed light on the determinants of sugar specificity in the structural family
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Part of Journal of Organic Chemistry, p. 8986-8998, 2011
- DOI for Synthesis of Functionalized Cinnamaldehyde Derivatives by an Oxidative Heck Reaction and Their Use as Starting Materials for Preparation of Mycobacterium tuberculosis 1-Deoxy-D-xylulose-5-phosphate Reductoisomerase Inhibitors
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Conformational Changes and Ligand Recognition of Escherichia coli d-Xylose Binding Protein Revealed
Part of Journal of Molecular Biology, p. 657-668, 2010
- DOI for Conformational Changes and Ligand Recognition of Escherichia coli d-Xylose Binding Protein Revealed
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Zinc ions bind to and inhibit activated protein C
Part of Thrombosis and Haemostasis, p. 544-553, 2010
- DOI for Zinc ions bind to and inhibit activated protein C
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Part of Bioorganic & Medicinal Chemistry Letters, p. 6649-6654, 2009
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Part of Carbohydrate Research, p. 869-880, 2009
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Part of Journal of Molecular Biology, p. 504-513, 2009
- DOI for Structural basis for the inhibition of Mycobacterium tuberculosis glutamine synthetase by novel ATP-competitive inhibitors
- Download full text (pdf) of Structural basis for the inhibition of Mycobacterium tuberculosis glutamine synthetase by novel ATP-competitive inhibitors
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The first crystal structures of a family 19 class IV chitinase: the enzyme from Norway spruce
Part of Plant Molecular Biology, p. 277-289, 2009
- DOI for The first crystal structures of a family 19 class IV chitinase: the enzyme from Norway spruce
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Part of The FEBS Journal, p. 2116-2124, 2009
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Part of Journal of Molecular Biology, p. 217-228, 2008
- DOI for Crystal Structures of Mammalian Glutamine Synthetases Illustrate Substrate-Induced Conformational Changes and Provide Opportunities for Drug and Herbicide Design
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Part of Journal of Molecular Biology, p. 667-679, 2008
- DOI for D-ribose-5-phosphate isomerase B from Escherichia coli is also a functional D-allose-6-phosphate isomerase, while the Mycobacterium tuberculosis enzyme is not
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Part of Bioorganic & Medicinal Chemistry, p. 5501-5513, 2008
- DOI for Evaluation of the amino acid binding site of Mycobacterium tuberculosis glutamine synthetase for drug discovery
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Part of Protein Science, p. 1275-1284, 2008
- DOI for Removal of distal protein-water hydrogen bonds in a plant epoxide hydrolase increases catalytic turnover but decreases thermostability
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Part of Journal of Molecular Biology, p. 622-633, 2008
- DOI for Structural, biochemical and in vivo investigations of the threonine synthase from Mycobacterium tuberculosis
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Part of Journal of Molecular Biology, p. 109-119, 2008
- DOI for X-ray structure of Candida antarctica lipase A shows a novel lid structure and a likely mode of interfacial activation
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Part of The FEBS Journal, p. 3695-3703, 2007
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Part of Combinatorial chemistry & high throughput screening, p. 783-789, 2007
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Part of Journal of Biological Chemistry, p. 19905-19916, 2007
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Part of Acta Crystallogr D Biol Crystallogr, p. 807-13, 2006
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Part of Acta Crystallogr. Section D Biol. Crystallogr., p. 807-813, 2006
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X-ray structure of potato epoxide hydrolase sheds light on its substrate specificity
Part of Protein Science, p. 1628-1637, 2006
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Competitive inhibitors of Mycobacterium tuberculosis ribose-5-phosphate isomerase
Part of J Biol Chem, p. 6416-22, 2005
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Structure and function of carbonic anhydrases from Mycobacterium tuberculosis.
Part of J Biol Chem, p. 18782-9, 2005
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Structure of an atypical epoxide hydrolase from Mycobacterium tuberculosis
Part of J Mol Biol, p. 1048-56, 2005
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Part of Proc. Natl. Acad. Sci. USA, p. 10499-10504, 2005
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Part of Proceedings of the National Academy of Sciences of the United States of America, p. 10499-10504, 2005
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Part of Tetrahedron letters, p. 3691-3694, 2005
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Mycobacterium tuberculosis ribose-5-phosphate isomerase has a known fold, but a novel active site
Part of Journal of Molecular Biology, p. 799-809, 2004
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Mycobacterium tuberculosis ribose-5-phosphate isomerase has a known fold, but a novel active site.
Part of J Mol Biol, p. 799-809, 2004
Alumni
- Lu Lu
- Adrian Suarez Covarrubias
- Sanjeewani Sooriyaarachchi
- Annette Roos