Publications
Contrasting segregation patterns among endogenous retroviruses across the koala population
Part of Communications Biology, 2024
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Wildlife endogenous retroviruses: colonization, consequences, and cooption
Part of Trends in Genetics, p. 149-159, 2024
- DOI for Wildlife endogenous retroviruses: colonization, consequences, and cooption
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Part of Cell Reports, p. 113395, 2023
- DOI for Single-cell transcriptomics of human traumatic brain injury reveals activation of endogenous retroviruses in oligodendroglia
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Expansion of a retrovirus lineage in the koala genome
Part of Proceedings of the National Academy of Sciences of the United States of America, 2022
- DOI for Expansion of a retrovirus lineage in the koala genome
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Heterochiasmy and the establishment of gsdf as a novel sex determining gene in Atlantic halibut
Part of PLOS Genetics, 2022
- DOI for Heterochiasmy and the establishment of gsdf as a novel sex determining gene in Atlantic halibut
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Spatiotemporal variations in retrovirus-host interactions among Darwin’s finches
Part of Nature Communications, 2022
- DOI for Spatiotemporal variations in retrovirus-host interactions among Darwin’s finches
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Part of Fungal Genetics Reports, 2022
- DOI for Transposon- and Genome Dynamics in the Fungal Genus Neurospora: Insights from Nearly Gapless Genome Assemblies
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Activation of endogenous retroviruses during brain development causes an inflammatory response
Part of EMBO Journal, 2021
- DOI for Activation of endogenous retroviruses during brain development causes an inflammatory response
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Part of Communications Biology, 2021
- DOI for Functional differences between TSHR alleles associate with variation in spawning season in Atlantic herring
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Part of Philosophical Transactions of the Royal Society of London. Biological Sciences, 2021
- DOI for The avian W chromosome is a refugium for endogenous retroviruses with likely effects on female-biased mutational load and genetic incompatibilities
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ZBED6 binding motifs correlate with endogenous retroviruses and Syncytin genes
Part of Virus Evolution, 2021
- DOI for ZBED6 binding motifs correlate with endogenous retroviruses and Syncytin genes
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Part of Mobile DNA, 2019
- DOI for Characterization of the endogenous retrovirus insertion in CYP19A1 associated with henny feathering in chicken
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Obituary: Jonas Blomberg (1944–2019)
Part of Retrovirology, 2019
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Part of Genes, 2019
- DOI for Whole-Genome Analysis of Domestic Chicken Selection Lines Suggests Segregating Variation in ERV Makeups
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Bridging gaps in transposable element research with single-molecule and single-cell technologies
Part of Mobile DNA, 2018
- DOI for Bridging gaps in transposable element research with single-molecule and single-cell technologies
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Part of Proceedings of the National Academy of Sciences of the United States of America, p. 11012-11017, 2018
- DOI for Whole-genome comparison of endogenous retrovirus segregation across wild and domestic host species populations
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Part of Cell Reports, p. 1-11, 2017
- DOI for TRIM28 Controls a Gene Regulatory Network Based on Endogenous Retroviruses in Human Neural Progenitor Cells
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The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing
Part of eLIFE, 2016
- DOI for The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing
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cgmisc: Enhanced Genome-wide Association Analyses and Visualisation
Part of Bioinformatics, p. 3830-3831, 2015
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Pan-vertebrate comparative genomics unmasks retrovirus macroevolution
Part of Proceedings of the National Academy of Sciences of the United States of America, p. 464-469, 2015
Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies)
Part of PLOS ONE, 2015
- DOI for Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies)
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TRIM28 Represses Transcription of Endogenous Retroviruses in Neural Progenitor Cells
Part of Cell Reports, p. 20-28, 2015
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Broad-scale phylogenomics provides insights into retrovirus–host evolution
Part of Proceedings of the National Academy of Sciences of the United States of America, p. 20146-20151, 2013
Unsupervised genome-wide recognition of local relationship patterns
Part of BMC Genomics, p. 347, 2013
- DOI for Unsupervised genome-wide recognition of local relationship patterns
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ZBED Evolution: Repeated Utilization of DNA Transposons as Regulators of Diverse Host Functions
Part of PLOS ONE, 2013
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Analyses of pig genomes provide insight into porcine demography and evolution
Part of Nature, p. 393-398, 2012
Strong signatures of selection in the domestic pig genome
Part of Proceedings of the National Academy of Sciences of the United States of America, p. 19529-19536, 2012
Studies on the Restriction of Murine Leukemia Viruses by Mouse APOBEC3
Part of PLOS ONE, 2012
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The First Sequenced Carnivore Genome Shows Complex Host-Endogenous Retrovirus Relationships
Part of PLOS ONE, 2011
Endogenous non-retroviral RNA virus elements in mammalian genomes.
Part of Nature, p. 84-87, 2010
Part of PLos ONE, 2009
- DOI for Evolutionary Conservation of Orthoretroviral Long Terminal Repeats (LTRs) and ab initio Detection of Single LTRs in Genomic Data
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Likely role of APOBEC3G-mediated G-to-A mutations in HIV-1 evolution and drug resistance.
Part of PLoS pathogens, 2009
Effects of retroviruses on host genome function.
Part of Annual Review of Genetics, p. 709-32, 2008
Host-retrovirus arms race: trimming the budget.
Part of Cell host & microbe, p. 196-7, 2008
Automated recognition of retroviral sequences in genomic data - RetroTector©
Part of Nucleic Acids Research, p. 4964-4976, 2007
Role of APOBEC3 in genetic diversity among endogenous murine leukemia viruses.
Part of PLoS genetics, p. 2014-22, 2007
Part of Journal of Virology, p. 1367-1375, 2006
Part of Journal of Virological Methods, p. 16-30, 2005
Evolutionary Aspects of Human Endogenous Retroviral Sequences (HERVs) and Disease
Part of Retroviruses and Primate Genome Evolution, Eurekah.com / Landes Bioscience, 2005
Sequence variability, gene structure, and expression of full-length human endogenous
Part of J Virol, p. 6325-37, 2005
Use of Endogenous Retroviral Sequences (ERVs) and structural markers for retroviral
Part of Retrovirology, p. 50, 2005
Definition and variation of human endogenous retrovirus H.
Part of Virology, p. 93-110, 2004
Full-length HERV-H elements with env SU open reading frames in the human genome.
Part of AIDS Res Hum Retroviruses, p. 671-6, 2002