Publikationer

Spatial distribution and influence of the microclimate on the natural production of Amanita masasiensis in the Soudano-Guinean ecozone (West Africa)

Aboua, Hance Muriel N.; Badou, Sylvestre A.; Houdanon, Roel D.; Boukary, Abdoul-Azize et al.

Ingår i Forest Ecology and Management, 2025

Artikel i tidskrift

• DOI för Spatial distribution and influence of the microclimate on the natural production of Amanita masasiensis in the Soudano-Guinean ecozone (West Africa)

Finding Starship Genetic Elements in Histoplasma Fungus

Pettersson, Gabriel André

2025

Studentuppsats (Examensarbete)

• Ladda ner fulltext (pdf) av Finding Starship Genetic Elements in Histoplasma Fungus

Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library

Duran-Fuentes, Jeferson A.; Maronna, Maximiliano M.; Palacios Gimenez, Octavio Manuel; Castillo, Elio R. et al.

Ingår i BMC Genomics, 2025

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• DOI för Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library
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Karyotype evolution and speciation in Orthoptera

Palacios Gimenez, Octavio Manuel; Castillo, Elio R. D.; Schielzeth, Holger

Ingår i Journal of Evolutionary Biology, s. 516-529, 2025

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• DOI för Karyotype evolution and speciation in Orthoptera
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Boswellia hesperia sp. nov. (Burseraceae) from Socotra

Thulin, Mats; Weber, Michael; Mubarak, Sami Ali Mohammed; Rzepecky, Alain

Ingår i Nordic Journal of Botany, 2025

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• DOI för Boswellia hesperia sp. nov. (Burseraceae) from Socotra
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Evolution of a bipolar sexual compatibility system in Marasmius

Thoren, Markus Hiltunen; Stanojkovic, Aleksandar; Ryberg, Martin; Johannesson, Hanna

Ingår i Mycologia, s. 19-33, 2025

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• DOI för Evolution of a bipolar sexual compatibility system in Marasmius
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Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)

Ge, Zai-Wei; Qu, Hua; Saba, Malka; Gao, Tian et al.

Ingår i Journal of Fungi, 2025

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• DOI för Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)
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The Origin and Diversification of Ectomycorrhizal Fungi

Khan, Faheema Kalsoom

2025

Doktorsavhandling, sammanläggning

• Ladda ner fulltext (pdf) av The Origin and Diversification of Ectomycorrhizal Fungi

Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum

Svantesson, Sten; Tondeleir, Lowie; Kulju, Matti; Irsenaite, Reda et al.

Ingår i Fungal Biology, 2025

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• DOI för Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum
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Evolution: Untangling the mix of plastid endosymbiosis events

Keeling, Patrick J.; Burki, Fabien

Ingår i Current Biology, 2025

Artikel i tidskrift

• DOI för Evolution: Untangling the mix of plastid endosymbiosis events

Repetitive DNAs: the 'invisible' regulators of insect adaptation and speciation

Cabral-de-Mello, Diogo C.; Palacios-Gimenez, Octavio M.

Ingår i Current Opinion in Insect Science, 2025

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• DOI för Repetitive DNAs: the 'invisible' regulators of insect adaptation and speciation

Swedish marine demosponge fauna (Porifera: Demospongiae) sampled 80 years after Jägerskiöld’s inventory

Pereira, Raquel; Larsson, Mats; Cárdenas, Paco; Thollesson, Mikael

Ingår i European journal of taxonomy, s. 1-64, 2025

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• DOI för Swedish marine demosponge fauna (Porifera: Demospongiae) sampled 80 years after Jägerskiöld’s inventory
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The 2024 Outline of Fungi and fungus-like taxa

Hyde, K. D.; Ryberg, Martin; Svantesson, Sten; Zvyagina, E.

Ingår i Mycosphere, s. 5146-6239, 2024

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• DOI för The 2024 Outline of Fungi and fungus-like taxa

20 years of bibliometric data illustrates a lack of concordance between journal impact factor and fungal species discovery in systematic mycology

Nilsson, R. Henrik; Jansson, Arnold Tobias; Wurzbacher, Christian; Anslan, Sten et al.

Ingår i MycoKeys, s. 273-285, 2024

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• DOI för 20 years of bibliometric data illustrates a lack of concordance between journal impact factor and fungal species discovery in systematic mycology
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Novel Approach for Lifetime-Proportional Luminescence Imaging Using Frame Straddling

Ahmerkamp, Soeren; Pacherres, Cesar O.; Mosshammer, Maria; Godefroid, Mathilde et al.

Ingår i ACS Sensors, s. 5531-5540, 2024

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• DOI för Novel Approach for Lifetime-Proportional Luminescence Imaging Using Frame Straddling
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Phylogenetic systematics of Vigna sensu stricto in the context of Physostigma and allies

Horton, Dasha M.; Feleke, Yonas; Pasquet, Remy S.; Javadi, Firouzeh et al.

Ingår i American Journal of Botany, 2024

Artikel i tidskrift

• DOI för Phylogenetic systematics of Vigna sensu stricto in the context of Physostigma and allies

Inga Hedberg (1927-2024) –: inspirational driving force in tropical African botany for 60 years

Friis, Ib; Demissew, Sebsebe; Thulin, Mats

Ingår i Webbia, s. 3-18, 2024

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• DOI för Inga Hedberg (1927-2024) –: inspirational driving force in tropical African botany for 60 years
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Benchmarking long-read sequencing strategies for obtaining ASV-resolved rRNA operons from environmental microeukaryotes

Overgaard, Christina Karmisholt; Jamy, Mahwash; Radutoiu, Simona; Burki, Fabien et al.

Ingår i Molecular Ecology Resources, 2024

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• DOI för Benchmarking long-read sequencing strategies for obtaining ASV-resolved rRNA operons from environmental microeukaryotes
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Pushing the boundaries of rare disease diagnostics with the help of the first Undiagnosed Hackathon

Delgado-Vega, Angelica Maria; Höijer, Ida; Corcoran, Pádraic; Lysenkova, Mariya et al.

Ingår i Nature Genetics, s. 2287-2294, 2024

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• DOI för Pushing the boundaries of rare disease diagnostics with the help of the first Undiagnosed Hackathon

The genomes of all lungfish inform on genome expansion and tetrapod evolution

Schartl, Manfred; Woltering, Joost M.; Irisarri, Iker; Du, Kang et al.

Ingår i Nature, s. 96-103, 2024

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• DOI för The genomes of all lungfish inform on genome expansion and tetrapod evolution

Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes

Jayaprasad, Suvratha; Peona, Valentina; Ellerstrand, Simon J.; Rossini, Roberto et al.

Ingår i Molecular Ecology, 2024

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• DOI för Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes
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Phylogeny and systematics of Paramollugo (Molluginaceae)

Thulin, Mats; Bidault, Ehoarn; Boullet, Vincent; Heidari, Nahid et al.

Ingår i Candollea, s. 179-228, 2024

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• DOI för Phylogeny and systematics of Paramollugo (Molluginaceae)
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A Phylogenomic Analysis of Genipa (Rubiaceae) Using Target Sequence Capture Data

Ridley, Rhonda; Persson, Claes; Oxelman, Bengt; Andermann, Tobias et al.

Ingår i Systematic Botany, s. 617-625, 2024

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• DOI för A Phylogenomic Analysis of Genipa (Rubiaceae) Using Target Sequence Capture Data

Contemporary intergeneric hybridization and backcrossing among birds-of-paradise

Thörn, Filip; Soares, André; Müller, Ingo A.; Päckert, Martin et al.

Ingår i Evolution Letters, s. 680-694, 2024

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• DOI för Contemporary intergeneric hybridization and backcrossing among birds-of-paradise
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Starships: a new frontier for fungal biology

Urquhart, Andrew S.; Vogan, Aaron A.; Gluck-Thaler, Emile

Ingår i Trends in Genetics, s. 1060-1073, 2024

Artikel, forskningsöversikt

• DOI för Starships: a new frontier for fungal biology

A new Calicium on Ramboldia

Tibell, Leif; Clayden, Stephen R.; Prieto, Maria; Wedin, Mats

Ingår i The Lichenologist, s. 301-307, 2024

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• DOI för A new Calicium on Ramboldia
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Gene acquisition by giant transposons primes eukaryotes for rapid evolution via horizontal gene transfer

Urquhart, Andrew S.; Gluck-Thaler, Emile; Vogan, Aaron A.

Ingår i Science Advances, 2024

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• DOI för Gene acquisition by giant transposons primes eukaryotes for rapid evolution via horizontal gene transfer
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Rebuttal to "(2943) Proposal to conserve Selaginella, nom. cons., (Selaginellaceae) with a conserved type": An unwarranted and disruptive idea

Valdespino, Ivan A.; Korall, Petra; Weststrand, Stina; Lopez, Christian A. et al.

Ingår i Taxon, s. 573-585, 2024

Artikel, forskningsöversikt

• DOI för Rebuttal to "(2943) Proposal to conserve Selaginella, nom. cons., (Selaginellaceae) with a conserved type": An unwarranted and disruptive idea

Herbationes Upsalienses – Var gick Linné med sina studenter?

Manktelow, Mariette; Gustafsson, Jan Helmer; Jacobson, Rolf

Ingår i Uppland 2024, Årsbok för medlemmarna av Upplands fornminnesförening och hembygdsförbund, s. 36-65, 2024

Artikel i tidskrift

Herbationes Upsalienses

Manktelow, Mariette; Ström, Annika; von Linné, Carl

Ingår i Uppland 2024. Årsbok för medlemmarna av Upplands fornminnesförening och hembygdsförbund, s. 8-35, 2024

Artikel i tidskrift

The Acrasis kona genome and developmental transcriptomes reveal deep origins of eukaryotic multicellular pathways

Sheikh, Sanea; Fu, Cheng-Jie; Brown, Matthew W.; Baldauf, Sandra L.

Ingår i Nature Communications, 2024

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• DOI för The Acrasis kona genome and developmental transcriptomes reveal deep origins of eukaryotic multicellular pathways
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Study on the temporal and spatial distribution of Culex mosquitoes in Hanoi, Vietnam

Krambrich, Janina; Nguyen-Tien, Thang; Pham-Thanh, Long; Dang-Xuan, Sinh et al.

Ingår i Scientific Reports, 2024

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• DOI för Study on the temporal and spatial distribution of Culex mosquitoes in Hanoi, Vietnam
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Genomic landscapes of divergence among island bird populations: Evidence of parallel adaptation but at different loci?

Martin, Claudia A.; Sheppard, Eleanor C.; Ali, Hisham A. A.; Illera, Juan Carlos et al.

Ingår i Molecular Ecology, 2024

Artikel i tidskrift

• DOI för Genomic landscapes of divergence among island bird populations: Evidence of parallel adaptation but at different loci?
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Exploring Paleogene Tibet's warm temperate environments through target enrichment and phylogenetic niche modelling of Himalayan spiny frogs (Paini, Dicroglossidae)

Hofmann, Sylvia; Rödder, Dennis; Andermann, Tobias; Matschiner, Michael et al.

Ingår i Molecular Ecology, 2024

Artikel i tidskrift

• DOI för Exploring Paleogene Tibet's warm temperate environments through target enrichment and phylogenetic niche modelling of Himalayan spiny frogs (Paini, Dicroglossidae)
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A multilocus phylogeny reveals two new species and two first reports of Backusella (Mucorales, Mucoromycota) in the New World

de Lima, Catarina Leticia Ferreira; Cordeiro, Thalline Rafhaella Leite; Urquhart, Andrew S.; Yadav, Lal Sahab et al.

Ingår i Mycological progress, 2024

Artikel i tidskrift

• DOI för A multilocus phylogeny reveals two new species and two first reports of Backusella (Mucorales, Mucoromycota) in the New World

Systematic identification of cargo-mobilizing genetic elements reveals new dimensions of eukaryotic diversity

Gluck-Thaler, Emile; Vogan, Aaron A.

Ingår i Nucleic Acids Research, s. 5496-5513, 2024

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• DOI för Systematic identification of cargo-mobilizing genetic elements reveals new dimensions of eukaryotic diversity
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The evolution of ectomycorrhizal symbiosis and host-plant switches are the main drivers for diversification of Amanitaceae (Agaricales, Basidiomycota)

Cai, Qing; Codjia, Jean Evans I.; Buyck, Bart; Cui, Yang-Yang et al.

Ingår i BMC Biology, 2024

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• DOI för The evolution of ectomycorrhizal symbiosis and host-plant switches are the main drivers for diversification of Amanitaceae (Agaricales, Basidiomycota)
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Resurrection of Yeast From Historical Artefacts

Nielsen, Kevin

2024

Studentuppsats (Examensarbete)

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Ethnobotanical study of wild edible plants in the mountainous regions of Semnan Province, Iran

Jalali, Majid; Abedi, Mehdi; Memariani, Farshid; Ghorbani, Abdolbaset

Ingår i Journal of Ethnobiology and Ethnomedicine, 2024

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• DOI för Ethnobotanical study of wild edible plants in the mountainous regions of Semnan Province, Iran
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Phylogenomics, divergence times and notes of orders in Basidiomycota

He, Mao-Qiang; Cao, Bin; Liu, Fei; Boekhout, Teun et al.

Ingår i Fungal diversity, s. 1-125, 2024

Artikel i tidskrift

• DOI för Phylogenomics, divergence times and notes of orders in Basidiomycota

Chromosome-level genome assembly of the morabine grasshopper Vandiemenella viatica19

Li, Xuan; Jayaprasad, Suvratha; Einarsdottir, Elisabet; Cooper, Steven J. B. et al.

Ingår i Scientific Data, 2024

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• DOI för Chromosome-level genome assembly of the morabine grasshopper Vandiemenella viatica19
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The conserved WetA protein involved in asexual development in fungi is localized to the nuclei in the asexual spores of Paecilomyces variotii

Chong, Nicholas F.; Urquhart, Andrew S.; Idnurm, Alexander

Ingår i Fungal Biology, s. 2073-2079, 2024

Artikel i tidskrift

• DOI för The conserved WetA protein involved in asexual development in fungi is localized to the nuclei in the asexual spores of Paecilomyces variotii
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Morphological and molecular studies of bivalves to assess the hidden diversity of protistan parasites: Investigations of cryptic diseases in shellfish

Alfjorden, Anders

2024

Doktorsavhandling, sammanläggning

• Ladda ner fulltext (pdf) av Morphological and molecular studies of bivalves to assess the hidden diversity of protistan parasites: Investigations of cryptic diseases in shellfish

Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria

Hiltunen Thorén, Markus; Onuț-Brännström, Ioana; Alfjorden, Anders; Pecková, Hana et al.

Ingår i BMC Biology, 2024

Artikel i tidskrift

• DOI för Comparative genomics of Ascetosporea gives new insight into the evolutionary basis for animal parasitism in Rhizaria
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Ichthyosporea: a window into the origin of animals

Shabardina, Victoria; Dharamshi, Jennah E.; Ara, Patricia S.; Antó, Meritxell et al.

Ingår i Communications Biology, 2024

Artikel, forskningsöversikt

• DOI för Ichthyosporea: a window into the origin of animals
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Divergent evolution of male-determining loci on proto-Y chromosomes of the housefly

Li, Xuan; Visser, Sander; Son, Jae Hak; Geuverink, Elzemiek et al.

Ingår i Nature Communications, 2024

Artikel i tidskrift

• DOI för Divergent evolution of male-determining loci on proto-Y chromosomes of the housefly
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High rate of gene family evolution in proximity to the origin of ectomycorrhizal symbiosis in Inocybaceae

Khan, Faheema Kalsoom; Sánchez-García, Marisol; Johannesson, Hanna; Ryberg, Martin

Ingår i New Phytologist, s. 219-234, 2024

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• DOI för High rate of gene family evolution in proximity to the origin of ectomycorrhizal symbiosis in Inocybaceae
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Hybridization in birds-of-paradise: Widespread ancestral gene flow despite strong sexual selection in a lek-mating system

Blom, Mozes P. K.; Peona, Valentina; Prost, Stefan; Christidis, Les et al.

Ingår i iScience, 2024

Artikel i tidskrift

• DOI för Hybridization in birds-of-paradise: Widespread ancestral gene flow despite strong sexual selection in a lek-mating system
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Planting long-lived trees in a warming climate: Theory shows the importance of stage-dependent climatic tolerance

Erlichman, Adèle; Sandell, Linnea; Otto, Sarah P.; Aitken, Sally N. et al.

Ingår i Evolutionary Applications, 2024

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• DOI för Planting long-lived trees in a warming climate: Theory shows the importance of stage-dependent climatic tolerance
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Corydalis sunhangii (Papaveraceae): A new species from Xizang, China, based on plastome and morphological data

Chen, Jun-Tong; Lidén, Magnus; Huang, Xian-Han; Yang, Shun-Quan et al.

Ingår i Ecology and Evolution, 2024

Artikel i tidskrift

• DOI för Corydalis sunhangii (Papaveraceae): A new species from Xizang, China, based on plastome and morphological data
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