Publikationer

Identification of a deep-branching lineage of algae using environmental plastid genomes

Jamy, Mahwash; Huber, Thomas; Antoine, Thibault; Ruscheweyh, Hans-Joachim et al.

Ingår i Nature Communications, 2026

Artikel i tidskrift

• DOI för Identification of a deep-branching lineage of algae using environmental plastid genomes
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B chromosome retrotransposed sequences persist through speciation, contributing to genomic and regulatory innovations in the fish genus Psalidodon (Characiformes, Acestrorhamphidae)

Lasmar, Lucas F.; Vidal, Mateus R.; Nadai, Pamela C. F.; Dos Santos, Rodrigo Zeni et al.

Ingår i PLOS ONE, 2026

Artikel i tidskrift

• DOI för B chromosome retrotransposed sequences persist through speciation, contributing to genomic and regulatory innovations in the fish genus Psalidodon (Characiformes, Acestrorhamphidae)
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Early germline sequestration in a basidiomycete fungus

Hiltunen Thorén, Markus; Olsson, Boel; Vonk, Peter Jan; Siljestam, Mattias et al.

Ingår i Science, s. 720-723, 2025

Artikel i tidskrift

• DOI för Early germline sequestration in a basidiomycete fungus

The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication

Monsen, Oystein; Gronvold, Lars; Datsomor, Alex; Harvey, Thomas et al.

Ingår i Genome Research, s. 475-488, 2025

Artikel i tidskrift

• DOI för The role of transposon activity in shaping cis-regulatory element evolution after whole-genome duplication

Scientific plant names derived from the surname of Pehr Forsskål - their histrory, orthography, legitimacy, and current use

Friis, Ib

Ingår i Scientia Danica. Series B, Biologica, s. 1-86, 2025

Artikel i tidskrift

A taxonomic revision of the “Quadrispina clade” of Barleria sect. Prionitis

Defty, Ellie; Hatt, Sebastian; Thulin, Mats; Lidetu, Hanny et al.

Ingår i Webbia, s. 93-120, 2025

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• DOI för A taxonomic revision of the “Quadrispina clade” of Barleria sect. Prionitis

Euphorbia balsamifera subsp. adenensis (Euphorbiaceae) new to Socotra and notes on its taxonomy

Thulin, Mats; Weber, Michael H.; Mubarak, Sami Ali Mohammed

Ingår i Nordic Journal of Botany, 2025

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• DOI för Euphorbia balsamifera subsp. adenensis (Euphorbiaceae) new to Socotra and notes on its taxonomy
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The Linnaean revolution - A history of the Natural System

Lidén, Magnus

Ingår i Taxon, s. 1011-1034, 2025

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• DOI för The Linnaean revolution - A history of the Natural System
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Accumulation of a Biparentally Inherited Neptune Transposable Element in Natural Killifish Hybrids (Fundulus diaphanus x F. heteroclitus)

Roussel, Alexandre-James; Suh, Alexander; Ruiz-Ruano, Francisco J.; Dion-Cote, Anne-Marie

Ingår i Molecular biology and evolution, 2025

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• DOI för Accumulation of a Biparentally Inherited Neptune Transposable Element in Natural Killifish Hybrids (Fundulus diaphanus x F. heteroclitus)
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A mosaic of modular variation at a single gene underpins convergent plumage coloration

Lutgen, Dave; Peona, Valentina; Chase, Madeline A.; Kakhki, Niloofar Alaei et al.

Ingår i Science, 2025

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• DOI för A mosaic of modular variation at a single gene underpins convergent plumage coloration

Estimating national Red List statuses for fungi in Sweden: An improved deep learning approach to account for unbalanced data

Gomes De Almeida, Filipe; Baggström, Adrian; Andermann, Tobias

Ingår i Ecological Informatics, 2025

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• DOI för Estimating national Red List statuses for fungi in Sweden: An improved deep learning approach to account for unbalanced data
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Evolution of Large Polymorphic Inversions in a Panmictic Songbird

Pei, Yifan; Forstmeier, Wolfgang; Suh, Alexander; Bambach, Lynn et al.

Ingår i Molecular biology and evolution, 2025

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• DOI för Evolution of Large Polymorphic Inversions in a Panmictic Songbird
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Examining the presence of photosymbionts in amphitremids and centrohelids

Billiau, Steffi

2025

Studentuppsats (Examensarbete)

Corydalis shiyomiensis (Papaveraceae), a new species from Arunachal Pradesh, India

Khanal, Madhusudhan; Sivaranjani, S.; Singpho, Jaseng; Sarkar, Shuvadip et al.

Ingår i Phytotaxa, s. 87-92, 2025

Artikel i tidskrift

• DOI för Corydalis shiyomiensis (Papaveraceae), a new species from Arunachal Pradesh, India

Protist genomics: key to understanding eukaryotic evolution

Schoenle, Alexandra; Francis, Ore; Archibald, John M.; Burki, Fabien et al.

Ingår i Trends in Genetics, s. 868-882, 2025

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• DOI för Protist genomics: key to understanding eukaryotic evolution
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Giant transposons promote strain heterogeneity in a major fungal pathogen

Gluck-Thaler, Emile; Forsythe, Adrian; Puerner, Charles; Gutierrez-Perez, Cecilia et al.

Ingår i mBio, 2025

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• DOI för Giant transposons promote strain heterogeneity in a major fungal pathogen
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Paulinella acadia sp. nov., a New Photosynthetic Species Isolated From a Brackish Beach in British Columbia (Canada)

Pardasani, Yash; Palka, Maia V.; Leander, Brian S.; Burki, Fabien

Ingår i Journal of Eukaryotic Microbiology, 2025

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• DOI för Paulinella acadia sp. nov., a New Photosynthetic Species Isolated From a Brackish Beach in British Columbia (Canada)
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Morphology, Systematics and Life Cycle of Ozanamia fimbriatus (Haptista: Centroplasthelida), With Notes on Evolution of Organic Skeleton in Centrohelids

Drachko, Daria; Zlatogursky, Vasily V.

Ingår i Journal of Eukaryotic Microbiology, 2025

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• DOI för Morphology, Systematics and Life Cycle of Ozanamia fimbriatus (Haptista: Centroplasthelida), With Notes on Evolution of Organic Skeleton in Centrohelids
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Metagenomic insights into the diet and past Kolyma Lowland habitat from the intestinal content of a Late Pleistocene steppe bison

Jin, Chenyu; Forsythe, Adrian; Balint, Miklos; Kienast, Frank et al.

Ingår i Quaternary Science Reviews, 2025

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• DOI för Metagenomic insights into the diet and past Kolyma Lowland habitat from the intestinal content of a Late Pleistocene steppe bison
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Boswellia oropedionis (Burseraceae) sp. nov., a frankincense tree from Socotra, and notes on B. ameero and B. bullata

Thulin, Mats; Weber, Michael H.; Mubarak, Sami Ali Mohammed

Ingår i Nordic Journal of Botany, 2025

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• DOI för Boswellia oropedionis (Burseraceae) sp. nov., a frankincense tree from Socotra, and notes on B. ameero and B. bullata
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Koenigia arunachalensis sp. nov. (Polygonaceae), a new species from Eastern Himalaya, India

Hajong, Bipankar; Lidén, Magnus; Bharali, Pankaj

Ingår i Nordic Journal of Botany, 2025

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• DOI för Koenigia arunachalensis sp. nov. (Polygonaceae), a new species from Eastern Himalaya, India

Few genetic loci control the green-brown colour polymorphism in the meadow grasshopper Pseudochorthippus parallelus

Varma, Mahendra; Winter, Gabe; Ebeling, Anne; Lehmann, Angela et al.

Ingår i Journal of Evolutionary Biology, s. 639-651, 2025

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• DOI för Few genetic loci control the green-brown colour polymorphism in the meadow grasshopper Pseudochorthippus parallelus
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Impact of genetic variants linked to liver fat and liver volume on MRI-mapped body composition

Ahmad, Shafqat; Carrasquilla, German D.; Langner, Taro; Menzel, Uwe et al.

Ingår i JHEP Reports, 2025

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• DOI för Impact of genetic variants linked to liver fat and liver volume on MRI-mapped body composition
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Phylogenetic position and mitochondrial genome evolution of "orphan" eukaryotic lineages

Zlatogursky, Vasily; Boscaro, Vittorio; Lax, Gordon; Wanntorp, Matias et al.

Ingår i iScience, 2025

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• DOI för Phylogenetic position and mitochondrial genome evolution of "orphan" eukaryotic lineages
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Advancing transdisciplinary research on Madagascar's grassy biomes to support resilience in ecosystems and livelihoods

Phelps, Leanne N.; Razanatsoa, Estelle; Davis, Dylan S.; Hackel, Jan et al.

Ingår i Ecological Monographs, 2025

Artikel, forskningsöversikt

• DOI för Advancing transdisciplinary research on Madagascar's grassy biomes to support resilience in ecosystems and livelihoods
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The utility of combining deep learning with metabarcoding to model biodiversity dynamics at a national scale

Baggström, Adrian; Goodsell, Robert; van Dijk, Laura; Iwaszkiewicz-Eggebrecht, Ela et al.

Ingår i Ecological Informatics, 2025

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• DOI för The utility of combining deep learning with metabarcoding to model biodiversity dynamics at a national scale
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Are Fungal Disease Outbreaks Instigated by Starship Transposons?

Urquhart, Andrew S.; Forsythe, Adrian; Vogan, Aaron A.

Ingår i Molecular plant pathology, 2025

Artikel, forskningsöversikt

• DOI för Are Fungal Disease Outbreaks Instigated by Starship Transposons?
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Experimental Insights into Horizontal Transfer of Fungal Starship Megatransposons

Henriksson, Sofia

2025

Studentuppsats (Examensarbete)

• Ladda ner fulltext 1 (pdf) av Experimental Insights into Horizontal Transfer of Fungal Starship Megatransposons
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Investigating the explanatory and predictive power of geodiversity metrics on Swedish insect diversity

Ling, Jiacheng

2025

Studentuppsats (Examensarbete)

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Spatial distribution and influence of the microclimate on the natural production of Amanita masasiensis in the Soudano-Guinean ecozone (West Africa)

Aboua, Hance Muriel N.; Badou, Sylvestre A.; Houdanon, Roel D.; Boukary, Abdoul-Azize et al.

Ingår i Forest Ecology and Management, 2025

Artikel i tidskrift

• DOI för Spatial distribution and influence of the microclimate on the natural production of Amanita masasiensis in the Soudano-Guinean ecozone (West Africa)

Finding Starship Genetic Elements in Histoplasma Fungus

Pettersson, Gabriel André

2025

Studentuppsats (Examensarbete)

• Ladda ner fulltext (pdf) av Finding Starship Genetic Elements in Histoplasma Fungus

Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library

Duran-Fuentes, Jeferson A.; Maronna, Maximiliano M.; Palacios Gimenez, Octavio Manuel; Castillo, Elio R. et al.

Ingår i BMC Genomics, 2025

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• DOI för Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library
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Karyotype evolution and speciation in Orthoptera

Palacios Gimenez, Octavio Manuel; Castillo, Elio R. D.; Schielzeth, Holger

Ingår i Journal of Evolutionary Biology, s. 516-529, 2025

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• DOI för Karyotype evolution and speciation in Orthoptera
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Boswellia hesperia sp. nov. (Burseraceae) from Socotra

Thulin, Mats; Weber, Michael; Mubarak, Sami Ali Mohammed; Rzepecky, Alain

Ingår i Nordic Journal of Botany, 2025

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• DOI för Boswellia hesperia sp. nov. (Burseraceae) from Socotra
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Evolution of a bipolar sexual compatibility system in Marasmius

Thoren, Markus Hiltunen; Stanojkovic, Aleksandar; Ryberg, Martin; Johannesson, Hanna

Ingår i Mycologia, s. 19-33, 2025

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• DOI för Evolution of a bipolar sexual compatibility system in Marasmius
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Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)

Ge, Zai-Wei; Qu, Hua; Saba, Malka; Gao, Tian et al.

Ingår i Journal of Fungi, 2025

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• DOI för Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)
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The Origin and Diversification of Ectomycorrhizal Fungi

Khan, Faheema Kalsoom

2025

Doktorsavhandling, sammanläggning

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Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum

Svantesson, Sten; Tondeleir, Lowie; Kulju, Matti; Irsenaite, Reda et al.

Ingår i Fungal Biology, 2025

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• DOI för Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum
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Evolution: Untangling the mix of plastid endosymbiosis events

Keeling, Patrick J.; Burki, Fabien

Ingår i Current Biology, 2025

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• DOI för Evolution: Untangling the mix of plastid endosymbiosis events

Repetitive DNAs: the 'invisible' regulators of insect adaptation and speciation

Cabral-de-Mello, Diogo C.; Palacios-Gimenez, Octavio M.

Ingår i Current Opinion in Insect Science, 2025

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• DOI för Repetitive DNAs: the 'invisible' regulators of insect adaptation and speciation

Swedish marine demosponge fauna (Porifera: Demospongiae) sampled 80 years after Jägerskiöld’s inventory

Pereira, Raquel; Larsson, Mats; Cárdenas, Paco; Thollesson, Mikael

Ingår i European journal of taxonomy, s. 1-64, 2025

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• DOI för Swedish marine demosponge fauna (Porifera: Demospongiae) sampled 80 years after Jägerskiöld’s inventory
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The 2024 Outline of Fungi and fungus-like taxa

Hyde, K. D.; Ryberg, Martin; Svantesson, Sten; Zvyagina, E.

Ingår i Mycosphere, s. 5146-6239, 2024

Artikel i tidskrift

• DOI för The 2024 Outline of Fungi and fungus-like taxa

20 years of bibliometric data illustrates a lack of concordance between journal impact factor and fungal species discovery in systematic mycology

Nilsson, R. Henrik; Jansson, Arnold Tobias; Wurzbacher, Christian; Anslan, Sten et al.

Ingår i MycoKeys, s. 273-285, 2024

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• DOI för 20 years of bibliometric data illustrates a lack of concordance between journal impact factor and fungal species discovery in systematic mycology
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Novel Approach for Lifetime-Proportional Luminescence Imaging Using Frame Straddling

Ahmerkamp, Soeren; Pacherres, Cesar O.; Mosshammer, Maria; Godefroid, Mathilde et al.

Ingår i ACS Sensors, s. 5531-5540, 2024

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• DOI för Novel Approach for Lifetime-Proportional Luminescence Imaging Using Frame Straddling
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Phylogenetic systematics of Vigna sensu stricto in the context of Physostigma and allies

Horton, Dasha M.; Feleke, Yonas; Pasquet, Remy S.; Javadi, Firouzeh et al.

Ingår i American Journal of Botany, 2024

Artikel i tidskrift

• DOI för Phylogenetic systematics of Vigna sensu stricto in the context of Physostigma and allies

Inga Hedberg (1927-2024) –: inspirational driving force in tropical African botany for 60 years

Friis, Ib; Demissew, Sebsebe; Thulin, Mats

Ingår i Webbia, s. 3-18, 2024

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• DOI för Inga Hedberg (1927-2024) –: inspirational driving force in tropical African botany for 60 years
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Benchmarking long-read sequencing strategies for obtaining ASV-resolved rRNA operons from environmental microeukaryotes

Overgaard, Christina Karmisholt; Jamy, Mahwash; Radutoiu, Simona; Burki, Fabien et al.

Ingår i Molecular Ecology Resources, 2024

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• DOI för Benchmarking long-read sequencing strategies for obtaining ASV-resolved rRNA operons from environmental microeukaryotes
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Pushing the boundaries of rare disease diagnostics with the help of the first Undiagnosed Hackathon

Delgado-Vega, Angelica Maria; Höijer, Ida; Corcoran, Pádraic; Lysenkova, Mariya et al.

Ingår i Nature Genetics, s. 2287-2294, 2024

Artikel i tidskrift

• DOI för Pushing the boundaries of rare disease diagnostics with the help of the first Undiagnosed Hackathon

The genomes of all lungfish inform on genome expansion and tetrapod evolution

Schartl, Manfred; Woltering, Joost M.; Irisarri, Iker; Du, Kang et al.

Ingår i Nature, s. 96-103, 2024

Artikel i tidskrift

• DOI för The genomes of all lungfish inform on genome expansion and tetrapod evolution

Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes

Jayaprasad, Suvratha; Peona, Valentina; Ellerstrand, Simon J.; Rossini, Roberto et al.

Ingår i Molecular Ecology, 2024

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• DOI för Orthopteran Neo-Sex Chromosomes Reveal Dynamics of Recombination Suppression and Evolution of Supergenes
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