Ahmed Sayadi

Negative frequency dependent selection contributes to the maintenance of a global polymorphism in mitochondrial DNA

Novicic, Zorana Kurbalija; Sayadi, Ahmed; Jelic, Mihailo; Arnqvist, Göran

Ingår i BMC Evolutionary Biology, 2020

• DOI för Negative frequency dependent selection contributes to the maintenance of a global polymorphism in mitochondrial DNA
• Ladda ner fulltext (pdf) av Negative frequency dependent selection contributes to the maintenance of a global polymorphism in mitochondrial DNA

Identification of novel ejaculate proteins in a seed beetle and division of labour across male accessory reproductive glands

Bayram, Helen L.; Sayadi, Ahmed; Immonen, Elina; Arnqvist, Göran

Ingår i Insect biochemistry and molecular biology, s. 50-57, 2019

• DOI för Identification of novel ejaculate proteins in a seed beetle and division of labour across male accessory reproductive glands

The genomic footprint of sexual conflict

Sayadi, Ahmed; Martínez Barrio, Álvaro; Immonen, Elina; Dainat, Jacques et al.

Ingår i Nature Ecology & Evolution, s. 1725-1730, 2019

• DOI för The genomic footprint of sexual conflict
• Ladda ner fulltext (pdf) av The genomic footprint of sexual conflict

Novel seminal fluid proteins in the seed beetle Callosobruchus maculatus identified by a proteomic and transcriptomic approach

Bayram, Helen L.; Sayadi, Ahmed; Goenaga, Julieta; Immonen, Elina et al.

Ingår i Insect molecular biology (Print), s. 58-73, 2017

• DOI för Novel seminal fluid proteins in the seed beetle Callosobruchus maculatus identified by a proteomic and transcriptomic approach

Divergent evolution of life span associated with mitochondrial DNA evolution

Stojkovic, Biljana; Sayadi, Ahmed; Dordevic, Mirko; Jovic, Jelena et al.

Ingår i Evolution, s. 160-166, 2017

• DOI för Divergent evolution of life span associated with mitochondrial DNA evolution

The Evolution of Dark Matter in the Mitogenome of Seed Beetles

Sayadi, Ahmed; Immonen, Elina; Tellgren-Roth, Christian; Arnqvist, Göran

Ingår i Genome Biology and Evolution, s. 2697-2706, 2017

• DOI för The Evolution of Dark Matter in the Mitogenome of Seed Beetles
• Ladda ner fulltext (pdf) av The Evolution of Dark Matter in the Mitogenome of Seed Beetles

Mating Changes Sexually Dimorphic Gene Expression in the Seed Beetle Callosobruchus maculatus

Immonen, Elina; Sayadi, Ahmed; Bayram, Helen; Arnqvist, Göran

Ingår i Genome Biology and Evolution, s. 677-699, 2017

• DOI för Mating Changes Sexually Dimorphic Gene Expression in the Seed Beetle Callosobruchus maculatus
• Ladda ner fulltext (pdf) av Mating Changes Sexually Dimorphic Gene Expression in the Seed Beetle Callosobruchus maculatus

Negative frequency dependent selection on sympatric mtDNA haplotypes in Drosophila subobscura

Arnqvist, Göran; Novicic, Zorana Kurbalija; Castro, Jose A.; Sayadi, Ahmed

Ingår i Hereditas, 2016

• DOI för Negative frequency dependent selection on sympatric mtDNA haplotypes in Drosophila subobscura
• Ladda ner fulltext (pdf) av Negative frequency dependent selection on sympatric mtDNA haplotypes in Drosophila subobscura

The De Novo Transcriptome and Its Functional Annotation in the Seed Beetle Callosobruchus maculatus

Sayadi, Ahmed; Immonen, Elina; Bayram, Helen; Arnqvist, Göran

Ingår i PLOS ONE, 2016

• DOI för The De Novo Transcriptome and Its Functional Annotation in the Seed Beetle Callosobruchus maculatus
• Ladda ner fulltext (pdf) av The De Novo Transcriptome and Its Functional Annotation in the Seed Beetle Callosobruchus maculatus

Functional features of EVI1 and EVI1Δ324 isoforms of MECOM gene in genome-wide transcription regulation and oncogenicity.

Sayadi, Ahmed; Jeyakani, J; Seet, S H; Wei, C-L et al.

Ingår i Oncogene, s. 2311-2321, 2016

• DOI för Functional features of EVI1 and EVI1Δ324 isoforms of MECOM gene in genome-wide transcription regulation and oncogenicity.

Genome size correlates with reproductive fitness in seed beetles

Arnqvist, Göran; Sayadi, Ahmed; Immonen, Elina; Hotzy, Cosima et al.

Ingår i Proceedings of the Royal Society of London. Biological Sciences, 2015

• DOI för Genome size correlates with reproductive fitness in seed beetles

Mice carrying a hypomorphic Evi1 allele are embryonic viable but exhibit severe congenital heart defects

Bard-Chapeau, Emilie A; Szumska, Dorota; Jacob, Bindya; Chua, Belinda Q L et al.

Ingår i PLOS ONE, 2014

• DOI för Mice carrying a hypomorphic Evi1 allele are embryonic viable but exhibit severe congenital heart defects
• Ladda ner fulltext (pdf) av Mice carrying a hypomorphic Evi1 allele are embryonic viable but exhibit severe congenital heart defects

Transposon mutagenesis identifies genes driving hepatocellular carcinoma in a chronic hepatitis B mouse model.

Bard-Chapeau, Emilie A; Nguyen, Anh-Tuan; Rust, Alistair G; Sayadi, Ahmed et al.

Ingår i Nature Genetics, 2014

• DOI för Transposon mutagenesis identifies genes driving hepatocellular carcinoma in a chronic hepatitis B mouse model.

Zip14 expression induced by lipopolysaccharides in macrophages attenuates inflammatory response

Sayadi, Ahmed; Nguyen, Anh-Tuan; Bard, Frederic A; Bard-Chapeau, Emilie A

Ingår i Inflammation Research, 2013

• DOI för Zip14 expression induced by lipopolysaccharides in macrophages attenuates inflammatory response

Genetic variants and mutations of PPM1D control the response to DNA damage

Dudgeon, Crissy; Shreeram, Sathyavageeswaran; Tanoue, Kan; Mazur, Sharlyn J et al.

Ingår i Cell Cycle, 2013

• DOI för Genetic variants and mutations of PPM1D control the response to DNA damage

Interaction network of the 14-3-3 protein in the ancient protozoan parasite Giardia duodenalis.

Lalle, Marco; Camerini, Serena; Cecchetti, Serena; Sayadi, Ahmed et al.

Ingår i Journal of Proteome Research, s. 2666-2683, 2012

• DOI för Interaction network of the 14-3-3 protein in the ancient protozoan parasite Giardia duodenalis.

Exploiting Publicly Available Biological and Biochemical Information for the Discovery of Novel Short Linear Motifs

Sayadi, Ahmed; Briganti, Leonardo; Tramontano, Anna; Via, Allegra

Ingår i PLOS ONE, 2011

• DOI för Exploiting Publicly Available Biological and Biochemical Information for the Discovery of Novel Short Linear Motifs
• Ladda ner fulltext (pdf) av Exploiting Publicly Available Biological and Biochemical Information for the Discovery of Novel Short Linear Motifs

ELM: the status of the 2010 eukaryotic linear motif resource.

Gould, Cathryn M; Diella, Francesca; Via, Allegra; Puntervoll, Pål et al.

Ingår i Nucleic Acids Research, 2010

• DOI för ELM: the status of the 2010 eukaryotic linear motif resource.
• Ladda ner fulltext (pdf) av ELM: the status of the 2010 eukaryotic linear motif resource.

Comparative Genomic Analysis of the Pattern of Evolution of Male and Female Reproductive Proteins in Seed Beetles

Papachristos, Konstantinos; Sayadi, Ahmed; Arnqvist, Göran

Ingår i Genome Biology and Evolution, 2024

• DOI för Comparative Genomic Analysis of the Pattern of Evolution of Male and Female Reproductive Proteins in Seed Beetles
• Ladda ner fulltext (pdf) av Comparative Genomic Analysis of the Pattern of Evolution of Male and Female Reproductive Proteins in Seed Beetles

A survey of ficolin-3 activity in Systemic Lupus Erythematosus reveals a link to hematological disease manifestations and autoantibody profile

Lindelöf, Linnea; Rantapää-Dahlqvist, Solbritt; Lundtoft, Christian; Sandling, Johanna K. et al.

Ingår i Journal of Autoimmunity, 2024

• DOI för A survey of ficolin-3 activity in Systemic Lupus Erythematosus reveals a link to hematological disease manifestations and autoantibody profile
• Ladda ner fulltext (pdf) av A survey of ficolin-3 activity in Systemic Lupus Erythematosus reveals a link to hematological disease manifestations and autoantibody profile

A chromosome-level assembly of the seed beetle Callosobruchus maculatus genome with annotation of its repetitive elements

Arnqvist, Göran; Westerberg, Ivar; Galbraith, James; Sayadi, Ahmed et al.

Ingår i G3, 2024

• DOI för A chromosome-level assembly of the seed beetle Callosobruchus maculatus genome with annotation of its repetitive elements
• Ladda ner fulltext (pdf) av A chromosome-level assembly of the seed beetle Callosobruchus maculatus genome with annotation of its repetitive elements

Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs

Mihalič, Filip; Simonetti, Leandro; Giudice, Girolamo; Rubin Sander, Marie et al.

Ingår i Nature Communications, 2023

• DOI för Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs
• Ladda ner fulltext (pdf) av Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs

B cell polygenic risk scores associate with anti-dsDNA antibodies and nephritis in systemic lupus erythematosus

Hedenstedt, Anna; Reid, Sarah; Sayadi, Ahmed; Eloranta, Maija-Leena et al.

Ingår i Lupus Science and Medicine, 2023

• DOI för B cell polygenic risk scores associate with anti-dsDNA antibodies and nephritis in systemic lupus erythematosus
• Ladda ner fulltext (pdf) av B cell polygenic risk scores associate with anti-dsDNA antibodies and nephritis in systemic lupus erythematosus

Comparative Genomic Analysis of the Pattern of Evolution of Male and Female Reproductive Proteins in Seed Beetles

Papachristos, Konstantinos; Sayadi, Ahmed; Arnqvist, Göran

Ingår i Genome Biology and Evolution, 2024

• DOI för Comparative Genomic Analysis of the Pattern of Evolution of Male and Female Reproductive Proteins in Seed Beetles
• Ladda ner fulltext (pdf) av Comparative Genomic Analysis of the Pattern of Evolution of Male and Female Reproductive Proteins in Seed Beetles

A survey of ficolin-3 activity in Systemic Lupus Erythematosus reveals a link to hematological disease manifestations and autoantibody profile

Lindelöf, Linnea; Rantapää-Dahlqvist, Solbritt; Lundtoft, Christian; Sandling, Johanna K. et al.

Ingår i Journal of Autoimmunity, 2024

• DOI för A survey of ficolin-3 activity in Systemic Lupus Erythematosus reveals a link to hematological disease manifestations and autoantibody profile
• Ladda ner fulltext (pdf) av A survey of ficolin-3 activity in Systemic Lupus Erythematosus reveals a link to hematological disease manifestations and autoantibody profile

A chromosome-level assembly of the seed beetle Callosobruchus maculatus genome with annotation of its repetitive elements

Arnqvist, Göran; Westerberg, Ivar; Galbraith, James; Sayadi, Ahmed et al.

Ingår i G3, 2024

• DOI för A chromosome-level assembly of the seed beetle Callosobruchus maculatus genome with annotation of its repetitive elements
• Ladda ner fulltext (pdf) av A chromosome-level assembly of the seed beetle Callosobruchus maculatus genome with annotation of its repetitive elements

Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs

Mihalič, Filip; Simonetti, Leandro; Giudice, Girolamo; Rubin Sander, Marie et al.

Ingår i Nature Communications, 2023

• DOI för Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs
• Ladda ner fulltext (pdf) av Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs

B cell polygenic risk scores associate with anti-dsDNA antibodies and nephritis in systemic lupus erythematosus

Hedenstedt, Anna; Reid, Sarah; Sayadi, Ahmed; Eloranta, Maija-Leena et al.

Ingår i Lupus Science and Medicine, 2023

• DOI för B cell polygenic risk scores associate with anti-dsDNA antibodies and nephritis in systemic lupus erythematosus
• Ladda ner fulltext (pdf) av B cell polygenic risk scores associate with anti-dsDNA antibodies and nephritis in systemic lupus erythematosus

Experimental Life History Evolution Results in Sex-specific Evolution of Gene Expression in Seed Beetles

Immonen, Elina; Sayadi, Ahmed; Stojkovic, Biljana; Savkovic, Uros et al.

Ingår i Genome Biology and Evolution, 2023

• DOI för Experimental Life History Evolution Results in Sex-specific Evolution of Gene Expression in Seed Beetles
• Ladda ner fulltext (pdf) av Experimental Life History Evolution Results in Sex-specific Evolution of Gene Expression in Seed Beetles

Proteome-scale mapping of binding sites in the unstructured regions of the human proteome

Benz, Caroline; Ali, Muhammad; Krystkowiak, Izabella; Simonetti, Leandro et al.

Ingår i Molecular Systems Biology, 2022

• DOI för Proteome-scale mapping of binding sites in the unstructured regions of the human proteome
• Ladda ner fulltext (pdf) av Proteome-scale mapping of binding sites in the unstructured regions of the human proteome

In silico promoter analysis and functional validation identify CmZFH, the co-regulator of hypoxia-responsive genes CmScylla and CmLPCAT

He, Li; Chen, Ivy W.; Zhang, Zan; Zheng, Wenping et al.

Ingår i Insect Biochemistry and Molecular Biology, 2022

• DOI för In silico promoter analysis and functional validation identify CmZFH, the co-regulator of hypoxia-responsive genes CmScylla and CmLPCAT

A possible genomic footprint of polygenic adaptation on population divergence in seed beetles?

Arnqvist, Göran; Sayadi, Ahmed

Ingår i Ecology and Evolution, 2022

• DOI för A possible genomic footprint of polygenic adaptation on population divergence in seed beetles?
• Ladda ner fulltext (pdf) av A possible genomic footprint of polygenic adaptation on population divergence in seed beetles?

Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities

Kruse, Thomas; Benz, Caroline; Garvanska, Dimitriya H.; Lindqvist, Richard et al.

Ingår i Nature Communications, 2021

• DOI för Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities
• Ladda ner fulltext (pdf) av Large scale discovery of coronavirus-host factor protein interaction motifs reveals SARS-CoV-2 specific mechanisms and vulnerabilities

Sexual conflict drives micro- and macroevolution of sexual dimorphism in immunity

Bagchi, Basabi; Corbel, Quentin; Khan, Imroze; Payne, Ellen et al.

Ingår i BMC Biology, 2021

• DOI för Sexual conflict drives micro- and macroevolution of sexual dimorphism in immunity
• Ladda ner fulltext (pdf) av Sexual conflict drives micro- and macroevolution of sexual dimorphism in immunity

Negative frequency dependent selection contributes to the maintenance of a global polymorphism in mitochondrial DNA

Novicic, Zorana Kurbalija; Sayadi, Ahmed; Jelic, Mihailo; Arnqvist, Göran

Ingår i BMC Evolutionary Biology, 2020

• DOI för Negative frequency dependent selection contributes to the maintenance of a global polymorphism in mitochondrial DNA
• Ladda ner fulltext (pdf) av Negative frequency dependent selection contributes to the maintenance of a global polymorphism in mitochondrial DNA

An experimental test of temperature-dependent selection on mitochondrial haplotypes in Callosobruchus maculatus seed beetles

Immonen, Elina; Berger, David; Sayadi, Ahmed; Liljestrand-Rönn, Johanna et al.

Ingår i Ecology and Evolution, s. 11387-11398, 2020

• DOI för An experimental test of temperature-dependent selection on mitochondrial haplotypes in Callosobruchus maculatus seed beetles
• Ladda ner fulltext (pdf) av An experimental test of temperature-dependent selection on mitochondrial haplotypes in Callosobruchus maculatus seed beetles

Identification of novel ejaculate proteins in a seed beetle and division of labour across male accessory reproductive glands

Bayram, Helen L.; Sayadi, Ahmed; Immonen, Elina; Arnqvist, Göran

Ingår i Insect biochemistry and molecular biology, s. 50-57, 2019

• DOI för Identification of novel ejaculate proteins in a seed beetle and division of labour across male accessory reproductive glands

The genomic footprint of sexual conflict

Sayadi, Ahmed; Martínez Barrio, Álvaro; Immonen, Elina; Dainat, Jacques et al.

Ingår i Nature Ecology & Evolution, s. 1725-1730, 2019

• DOI för The genomic footprint of sexual conflict
• Ladda ner fulltext (pdf) av The genomic footprint of sexual conflict

Novel seminal fluid proteins in the seed beetle Callosobruchus maculatus identified by a proteomic and transcriptomic approach

Bayram, Helen L.; Sayadi, Ahmed; Goenaga, Julieta; Immonen, Elina et al.

Ingår i Insect molecular biology (Print), s. 58-73, 2017

• DOI för Novel seminal fluid proteins in the seed beetle Callosobruchus maculatus identified by a proteomic and transcriptomic approach

Divergent evolution of life span associated with mitochondrial DNA evolution

Stojkovic, Biljana; Sayadi, Ahmed; Dordevic, Mirko; Jovic, Jelena et al.

Ingår i Evolution, s. 160-166, 2017

• DOI för Divergent evolution of life span associated with mitochondrial DNA evolution

The Evolution of Dark Matter in the Mitogenome of Seed Beetles

Sayadi, Ahmed; Immonen, Elina; Tellgren-Roth, Christian; Arnqvist, Göran

Ingår i Genome Biology and Evolution, s. 2697-2706, 2017

• DOI för The Evolution of Dark Matter in the Mitogenome of Seed Beetles
• Ladda ner fulltext (pdf) av The Evolution of Dark Matter in the Mitogenome of Seed Beetles

Mating Changes Sexually Dimorphic Gene Expression in the Seed Beetle Callosobruchus maculatus

Immonen, Elina; Sayadi, Ahmed; Bayram, Helen; Arnqvist, Göran

Ingår i Genome Biology and Evolution, s. 677-699, 2017

• DOI för Mating Changes Sexually Dimorphic Gene Expression in the Seed Beetle Callosobruchus maculatus
• Ladda ner fulltext (pdf) av Mating Changes Sexually Dimorphic Gene Expression in the Seed Beetle Callosobruchus maculatus

Negative frequency dependent selection on sympatric mtDNA haplotypes in Drosophila subobscura

Arnqvist, Göran; Novicic, Zorana Kurbalija; Castro, Jose A.; Sayadi, Ahmed

Ingår i Hereditas, 2016

• DOI för Negative frequency dependent selection on sympatric mtDNA haplotypes in Drosophila subobscura
• Ladda ner fulltext (pdf) av Negative frequency dependent selection on sympatric mtDNA haplotypes in Drosophila subobscura

The De Novo Transcriptome and Its Functional Annotation in the Seed Beetle Callosobruchus maculatus

Sayadi, Ahmed; Immonen, Elina; Bayram, Helen; Arnqvist, Göran

Ingår i PLOS ONE, 2016

• DOI för The De Novo Transcriptome and Its Functional Annotation in the Seed Beetle Callosobruchus maculatus
• Ladda ner fulltext (pdf) av The De Novo Transcriptome and Its Functional Annotation in the Seed Beetle Callosobruchus maculatus

Functional features of EVI1 and EVI1Δ324 isoforms of MECOM gene in genome-wide transcription regulation and oncogenicity.

Sayadi, Ahmed; Jeyakani, J; Seet, S H; Wei, C-L et al.

Ingår i Oncogene, s. 2311-2321, 2016

• DOI för Functional features of EVI1 and EVI1Δ324 isoforms of MECOM gene in genome-wide transcription regulation and oncogenicity.

Genome size correlates with reproductive fitness in seed beetles

Arnqvist, Göran; Sayadi, Ahmed; Immonen, Elina; Hotzy, Cosima et al.

Ingår i Proceedings of the Royal Society of London. Biological Sciences, 2015

• DOI för Genome size correlates with reproductive fitness in seed beetles

Mice carrying a hypomorphic Evi1 allele are embryonic viable but exhibit severe congenital heart defects

Bard-Chapeau, Emilie A; Szumska, Dorota; Jacob, Bindya; Chua, Belinda Q L et al.

Ingår i PLOS ONE, 2014

• DOI för Mice carrying a hypomorphic Evi1 allele are embryonic viable but exhibit severe congenital heart defects
• Ladda ner fulltext (pdf) av Mice carrying a hypomorphic Evi1 allele are embryonic viable but exhibit severe congenital heart defects

Transposon mutagenesis identifies genes driving hepatocellular carcinoma in a chronic hepatitis B mouse model.

Bard-Chapeau, Emilie A; Nguyen, Anh-Tuan; Rust, Alistair G; Sayadi, Ahmed et al.

Ingår i Nature Genetics, 2014

• DOI för Transposon mutagenesis identifies genes driving hepatocellular carcinoma in a chronic hepatitis B mouse model.

Zip14 expression induced by lipopolysaccharides in macrophages attenuates inflammatory response

Sayadi, Ahmed; Nguyen, Anh-Tuan; Bard, Frederic A; Bard-Chapeau, Emilie A

Ingår i Inflammation Research, 2013

• DOI för Zip14 expression induced by lipopolysaccharides in macrophages attenuates inflammatory response

Genetic variants and mutations of PPM1D control the response to DNA damage

Dudgeon, Crissy; Shreeram, Sathyavageeswaran; Tanoue, Kan; Mazur, Sharlyn J et al.

Ingår i Cell Cycle, 2013

• DOI för Genetic variants and mutations of PPM1D control the response to DNA damage

Interaction network of the 14-3-3 protein in the ancient protozoan parasite Giardia duodenalis.

Lalle, Marco; Camerini, Serena; Cecchetti, Serena; Sayadi, Ahmed et al.

Ingår i Journal of Proteome Research, s. 2666-2683, 2012

• DOI för Interaction network of the 14-3-3 protein in the ancient protozoan parasite Giardia duodenalis.

Exploiting Publicly Available Biological and Biochemical Information for the Discovery of Novel Short Linear Motifs

Sayadi, Ahmed; Briganti, Leonardo; Tramontano, Anna; Via, Allegra

Ingår i PLOS ONE, 2011

• DOI för Exploiting Publicly Available Biological and Biochemical Information for the Discovery of Novel Short Linear Motifs
• Ladda ner fulltext (pdf) av Exploiting Publicly Available Biological and Biochemical Information for the Discovery of Novel Short Linear Motifs

ELM: the status of the 2010 eukaryotic linear motif resource.

Gould, Cathryn M; Diella, Francesca; Via, Allegra; Puntervoll, Pål et al.

Ingår i Nucleic Acids Research, 2010

• DOI för ELM: the status of the 2010 eukaryotic linear motif resource.
• Ladda ner fulltext (pdf) av ELM: the status of the 2010 eukaryotic linear motif resource.

From genetic predisposition to clinical outcome in systemic lupus erythematosus: construction and validation of sub-phenotype-specific genetic risk scores

Reid, Sarah; Sandling, Johanna K.; Pucholt, Pascal; Sayadi, Ahmed et al.