Siv Andersson

Origin and evolution of key enzymes in the anammox pathway revisited

Hägglund, Emil; Jimenez-Gonzalez, Alejandro; Hagström, Erik; Björkholm, Patrik et al.

Ingår i Genome Biology and Evolution, 2026

• DOI för Origin and evolution of key enzymes in the anammox pathway revisited
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Origin and Evolution of Very Large Extracellular Proteins in Fructophilic Lactic Acid Bacteria

Pedersen, Julia; Mota-Merlo, Marina; Garcia-Montaner, Andrea; Selmer, Maria et al.

Ingår i Genome Biology and Evolution, 2026

• DOI för Origin and Evolution of Very Large Extracellular Proteins in Fructophilic Lactic Acid Bacteria
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Diversity of enzymes for exopolysaccharide synthesis in the fructophilic honeybee symbiont Apilactobacillus kunkeei

Mota-Merlo, Marina; Pedersen, Julia; Andersson, Siv

Ingår i BMC Microbiology, 2026

• DOI för Diversity of enzymes for exopolysaccharide synthesis in the fructophilic honeybee symbiont Apilactobacillus kunkeei
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Origin and Evolution of Key Enzymes in the Anammox Pathway Revisited

Hägglund, Emil; Jimenez-Gonzalez, Alejandro; Hagström, Erik; Bjorkholm, Patrik et al.

Ingår i Genome Biology and Evolution, 2025

• DOI för Origin and Evolution of Key Enzymes in the Anammox Pathway Revisited

Folded Alpha Helical Putative New Proteins from Apilactobacillus kunkeei

Ye, Weihua; Behra, Phani Rama Krishna; Dyrhage, Karl; Seeger, Christian et al.

Ingår i Journal of Molecular Biology, 2024

• DOI för Folded Alpha Helical Putative New Proteins from Apilactobacillus kunkeei
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Origin and evolution of key enzymes in the anammox pathway revisited

Hägglund, Emil; Jimenez-Gonzalez, Alejandro; Hagström, Erik; Björkholm, Patrik et al.

Ingår i Genome Biology and Evolution, 2026

• DOI för Origin and evolution of key enzymes in the anammox pathway revisited
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Origin and Evolution of Very Large Extracellular Proteins in Fructophilic Lactic Acid Bacteria

Pedersen, Julia; Mota-Merlo, Marina; Garcia-Montaner, Andrea; Selmer, Maria et al.

Ingår i Genome Biology and Evolution, 2026

• DOI för Origin and Evolution of Very Large Extracellular Proteins in Fructophilic Lactic Acid Bacteria
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Diversity of enzymes for exopolysaccharide synthesis in the fructophilic honeybee symbiont Apilactobacillus kunkeei

Mota-Merlo, Marina; Pedersen, Julia; Andersson, Siv

Ingår i BMC Microbiology, 2026

• DOI för Diversity of enzymes for exopolysaccharide synthesis in the fructophilic honeybee symbiont Apilactobacillus kunkeei
• Ladda ner fulltext (pdf) av Diversity of enzymes for exopolysaccharide synthesis in the fructophilic honeybee symbiont Apilactobacillus kunkeei

Origin and Evolution of Key Enzymes in the Anammox Pathway Revisited

Hägglund, Emil; Jimenez-Gonzalez, Alejandro; Hagström, Erik; Bjorkholm, Patrik et al.

Ingår i Genome Biology and Evolution, 2025

• DOI för Origin and Evolution of Key Enzymes in the Anammox Pathway Revisited

Folded Alpha Helical Putative New Proteins from Apilactobacillus kunkeei

Ye, Weihua; Behra, Phani Rama Krishna; Dyrhage, Karl; Seeger, Christian et al.

Ingår i Journal of Molecular Biology, 2024

• DOI för Folded Alpha Helical Putative New Proteins from Apilactobacillus kunkeei
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Phylogeny and Expansion of Serine/Threonine Kinases in Phagocytotic Bacteria in the Phylum Planctomycetota

Odelgard, Anna; Hägglund, Emil; Guy, Lionel; Andersson, Siv G. E.

Ingår i Genome Biology and Evolution, 2024

• DOI för Phylogeny and Expansion of Serine/Threonine Kinases in Phagocytotic Bacteria in the Phylum Planctomycetota
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Apilactobacillus kunkeei releases RNA-associated membrane vesicles and proteinaceous nanoparticles

Seeger, Christian; Dyrhage, Karl; Näslund, Kristina; Andersson, Siv

Ingår i Microlife, 2023

• DOI för Apilactobacillus kunkeei releases RNA-associated membrane vesicles and proteinaceous nanoparticles
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TADA: Taxonomy-Aware Dataset Aggregator

Hägglund, Emil; Andersson, Siv; Guy, Lionel

Ingår i Bioinformatics, 2023

• DOI för TADA: Taxonomy-Aware Dataset Aggregator
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Genome Evolution of a Symbiont Population for Pathogen Defense in Honeybees

Dyrhage, Karl; Garcia-Montaner, Andrea; Tamarit, Daniel; Seeger, Christian et al.

Ingår i Genome Biology and Evolution, 2022

• DOI för Genome Evolution of a Symbiont Population for Pathogen Defense in Honeybees
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The Subcellular Proteome of a Planctomycetes Bacterium Shows That Newly Evolved Proteins Have Distinct Fractionation Patterns

Seeger, Christian; Dyrhage, Karl; Mahajan, Mayank; Odelgard, Anna et al.

Ingår i Frontiers in Microbiology, 2021

• DOI för The Subcellular Proteome of a Planctomycetes Bacterium Shows That Newly Evolved Proteins Have Distinct Fractionation Patterns
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Antibiotics should not be used for back/leg pain

Fritzell, Peter; Hägg, Olle; Bergström, Tomas; Jönsson, Bodil et al.

Ingår i Acta Orthopaedica, s. 244-246, 2021

• DOI för Antibiotics should not be used for back/leg pain
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Letter to the editor concerning "Comment to chronic low back pain, bacterial infection and treatment with antibiotics"

Fritzell, Peter; Bergström, Tomas; Andersson, Siv G. E.; Jönsson, Bodil et al.

Ingår i The spine journal, s. 1233-1235, 2021

• DOI för Letter to the editor concerning "Comment to chronic low back pain, bacterial infection and treatment with antibiotics"

Evolutionary Remodeling of the Cell Envelope in Bacteria of the Planctomycetes Phylum

Mahajan, Mayank; Seeger, Christian; Yee, Benjamin; Andersson, Siv G. E.

Ingår i Genome Biology and Evolution, s. 1528-1548, 2020

• DOI för Evolutionary Remodeling of the Cell Envelope in Bacteria of the Planctomycetes Phylum
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Paralogization and New Protein Architectures in Planctomycetes Bacteria with Complex Cell Structures

Mahajan, Mayank; Yee, Benjamin; Hägglund, Emil; Guy, Lionel et al.

Ingår i Molecular biology and evolution, s. 1020-1040, 2020

• DOI för Paralogization and New Protein Architectures in Planctomycetes Bacteria with Complex Cell Structures

Rethinking microbial symbioses

Tamarit, Daniel; Andersson, Siv G. E.

Ingår i FEMS Microbiology Letters, 2020

• DOI för Rethinking microbial symbioses
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Bacteria: back pain, leg pain and Modic sign-a surgical multicentre comparative study

Fritzell, Peter; Welinder-Olsson, Christina; Jönsson, Bodil; Melhus, Åsa et al.

Ingår i European spine journal, s. 2981-2989, 2019

• DOI för Bacteria: back pain, leg pain and Modic sign-a surgical multicentre comparative study
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Genome Evolution of Bartonellaceae Symbionts of Ants at the Opposite Ends of the Trophic Scale

Bisch, Gaelle; Neuvonen, Minna M.; Pierce, Naomi E.; Russell, Jacob A. et al.

Ingår i Genome Biology and Evolution, s. 1687-1704, 2018

• DOI för Genome Evolution of Bartonellaceae Symbionts of Ants at the Opposite Ends of the Trophic Scale
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Origin and evolution of the Bartonella Gene Transfer Agent

Tamarit, Daniel; Neuvonen, Minna M.; Engel, Philipp; Guy, Lionel et al.

Ingår i Molecular biology and evolution, s. 451-464, 2018

• DOI för Origin and evolution of the Bartonella Gene Transfer Agent
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Specificity in Arabidopsis thaliana recruitment of root fungal communities from soil and rhizosphere

Urbina, Hector; Breed, Martin F.; Zhao, Weizhou; Gurrala, Kanaka Lakshmi et al.

Ingår i Fungal Biology, s. 231-240, 2018

• DOI för Specificity in Arabidopsis thaliana recruitment of root fungal communities from soil and rhizosphere

Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations

Garcia, Sarahi L; Stevens, Sarah L R; Crary, Benjamin; Martinez-Garcia, Manuel et al.

Ingår i The ISME Journal, s. 742-755, 2018

• DOI för Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations
• Ladda ner fulltext (pdf) av Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations

Why mitochondria need a genome revisited

Björkholm, Patrik; Ernst, Andreas M.; Hagström, Erik; Andersson, Siv G. E.

Ingår i FEBS Letters, s. 65-75, 2017

• DOI för Why mitochondria need a genome revisited

Switches in Genomic GC Content Drive Shifts of Optimal Codons under Sustained Selection on Synonymous Sites

Sun, Yu; Tamarit, Daniel; Andersson, Siv

Ingår i Genome Biology and Evolution, s. 2560-2579, 2017

• DOI för Switches in Genomic GC Content Drive Shifts of Optimal Codons under Sustained Selection on Synonymous Sites
• Ladda ner fulltext (pdf) av Switches in Genomic GC Content Drive Shifts of Optimal Codons under Sustained Selection on Synonymous Sites

Tuwongella immobilis gen. nov., sp nov., a novel non-motile bacterium within the phylum Planctomycetes

Seeger, Christian; Butler, Margaret K.; Yee, Benjamin; Mahajan, Mayank et al.

Ingår i International Journal of Systematic and Evolutionary Microbiology, s. 4923-4929, 2017

• DOI för Tuwongella immobilis gen. nov., sp nov., a novel non-motile bacterium within the phylum Planctomycetes
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Stress management strategies in single bacterial cells

Andersson, Siv G. E.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 3921-3923, 2016

• DOI för Stress management strategies in single bacterial cells

The genome of Rhizobiales bacteria in predatory ants reveals urease gene functions but no genes for nitrogen fixation

Neuvonen, Minna M.; Tamarit, Daniel; Näslund, Kristina; Liebig, Juergen et al.

Ingår i Scientific Reports, s. 1-11, 2016

• DOI för The genome of Rhizobiales bacteria in predatory ants reveals urease gene functions but no genes for nitrogen fixation
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Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria

Eiler, Alexander; Mondav, Rhiannon; Sinclair, Lucas; Fernandez-Vidal, Leyden et al.

Ingår i The ISME Journal, s. 1902-1914, 2016

• DOI för Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria

Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut

Ellegaard, Kirsten M.; Tamarit, Daniel; Javelind, Emelie; Olofsson, Tobias C. et al.

Ingår i BMC Genomics, 2015

• DOI för Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut
• Ladda ner fulltext (pdf) av Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut

Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees

Tamarit, Daniel; Ellegaard, Kirsten M.; Wikander, Johan; Olofsson, Tobias et al.

Ingår i Genome Biology and Evolution, s. 1455-1473, 2015

• DOI för Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees
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Mitochondrial genomes are retained by selective constraints on protein targeting

Björkholm, Patrik; Harish, Ajith; Hagström, Erik; Ernst, Andreas M. et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 10154-10161, 2015

• DOI för Mitochondrial genomes are retained by selective constraints on protein targeting

Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution

Martijn, Joran; Schulz, Frederik; Zaremba-Niedzwiedzka, Katarzyna; Viklund, Johan et al.

Ingår i The ISME Journal, s. 2373-2385, 2015

• DOI för Single-cell genomics of a rare environmental alphaproteobacterium provides unique insights into Rickettsiaceae evolution

Single cell genomics of deep ocean bacteria

Zhao, Weizhou; Andersson, Siv G. E.

Ingår i Trends in Microbiology, s. 233-234, 2014

• DOI för Single cell genomics of deep ocean bacteria

Missing Genes, Multiple ORFs, and C-to-U Type RNA Editing in Acrasis kona (Heterolobosea, Excavata) Mitochondrial DNA

Fu, Cheng-Jie; Sheikh, Sanea; Miao, Wei; Andersson, Siv G. E. et al.

Ingår i Genome Biology and Evolution, s. 2240-2257, 2014

• DOI för Missing Genes, Multiple ORFs, and C-to-U Type RNA Editing in Acrasis kona (Heterolobosea, Excavata) Mitochondrial DNA
• Ladda ner fulltext (pdf) av Missing Genes, Multiple ORFs, and C-to-U Type RNA Editing in Acrasis kona (Heterolobosea, Excavata) Mitochondrial DNA

Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae

Klasson, Lisa; Kumar, Nikhil; Bromley, Robin; Sieber, Karsten et al.

Ingår i BMC Genomics, s. 1097, 2014

• DOI för Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae
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Productivity and salinity structuring of the microplankton revealed by comparative freshwater metagenomics

Eiler, Alexander; Zaremba-Niedzwiedzka, Katarzyna; Martinez Garcia, Manuel; McMahon, Katherine et al.

Ingår i Environmental Microbiology, s. 2682-2698, 2014

• DOI för Productivity and salinity structuring of the microplankton revealed by comparative freshwater metagenomics
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Comparative Genomics of Wolbachia and the Bacterial Species Concept

Ellegaard, Kirsten Maren; Klasson, Lisa; Näslund, Kristina; Bourtzis, Kostas et al.

Ingår i PLOS Genetics, 2013

• DOI för Comparative Genomics of Wolbachia and the Bacterial Species Concept
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Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations

Ellegaard, Kirsten Maren; Klasson, Lisa; Andersson, Siv G. E.

Ingår i PLOS ONE, 2013

• DOI för Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations
• Ladda ner fulltext (pdf) av Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations

Comparative and Phylogenomic Evidence that the Alphaproteobacterium HIMB59 is not a Member of the Oceanic SAR11 Clade

Viklund, Johan; Martijn, Joran; Ettema, Thijs; Andersson, Siv

Ingår i PLOS ONE, 2013

• DOI för Comparative and Phylogenomic Evidence that the Alphaproteobacterium HIMB59 is not a Member of the Oceanic SAR11 Clade
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Adaptive Mutations and Replacements of Virulence Traits in the Escherichia coli O104:H4 Outbreak Population

Guy, Lionel; Jernberg, Cecilia; Norling, Jenny Arven; Ivarsson, Sofie et al.

Ingår i PLOS ONE, 2013

• DOI för Adaptive Mutations and Replacements of Virulence Traits in the Escherichia coli O104:H4 Outbreak Population
• Ladda ner fulltext (pdf) av Adaptive Mutations and Replacements of Virulence Traits in the Escherichia coli O104:H4 Outbreak Population

The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes

Siozios, Stefanos; Ioannidis, Panagiotis; Klasson, Lisa; Andersson, Siv G. E. et al.

Ingår i PLOS ONE, 2013

• DOI för The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes
• Ladda ner fulltext (pdf) av The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes

No Ancient DNA Damage in Actinobacteria from the Neanderthal Bone

Zaremba-Niedzwiedzka, Katarzyna; Andersson, Siv G. E.

Ingår i PLOS ONE, 2013

• DOI för No Ancient DNA Damage in Actinobacteria from the Neanderthal Bone
• Ladda ner fulltext (pdf) av No Ancient DNA Damage in Actinobacteria from the Neanderthal Bone

Single cell genomics reveals low recombination frequencies in freshwater bacteria of the SAR11 clade

Zaremba-Niedzwiedzka, Katarzyna; Viklund, Johan; Zhao, Weizhou; Ast, Jennifer et al.

Ingår i Genome Biology, 2013

• DOI för Single cell genomics reveals low recombination frequencies in freshwater bacteria of the SAR11 clade
• Ladda ner fulltext (pdf) av Single cell genomics reveals low recombination frequencies in freshwater bacteria of the SAR11 clade

A Gene Transfer Agent and a Dynamic Repertoire of Secretion Systems Hold the Keys to the Explosive Radiation of the Emerging Pathogen Bartonella

Guy, Lionel; Nystedt, Björn; Toft, Christina; Zaremba-Niedzwiedzka, Katarzyna et al.

Ingår i PLOS Genetics, 2013

• DOI för A Gene Transfer Agent and a Dynamic Repertoire of Secretion Systems Hold the Keys to the Explosive Radiation of the Emerging Pathogen Bartonella
• Ladda ner fulltext (pdf) av A Gene Transfer Agent and a Dynamic Repertoire of Secretion Systems Hold the Keys to the Explosive Radiation of the Emerging Pathogen Bartonella

A genome-wide study of recombination rate variation in Bartonella henselae

Guy, Lionel; Nystedt, Björn; Sun, Yu; Näslund, Kristina et al.

Ingår i BMC Evolutionary Biology, s. 65, 2012

• DOI för A genome-wide study of recombination rate variation in Bartonella henselae
• Ladda ner fulltext (pdf) av A genome-wide study of recombination rate variation in Bartonella henselae

Large-Scale Introgression Shapes the Evolution of the Mating-Type Chromosomes of the Filamentous Ascomycete Neurospora tetrasperma

Sun, Yu; Corcoran, Padraic; Menkis, Audrius; Whittle, Carrie A. et al.

Ingår i PLOS Genetics, 2012

• DOI för Large-Scale Introgression Shapes the Evolution of the Mating-Type Chromosomes of the Filamentous Ascomycete Neurospora tetrasperma
• Ladda ner fulltext (pdf) av Large-Scale Introgression Shapes the Evolution of the Mating-Type Chromosomes of the Filamentous Ascomycete Neurospora tetrasperma

Bacterial genomes: Next generation sequencing technologies for studies of bacterial ecosystems

Andersson, Siv G. E.; Goodman, A. L.

Ingår i Current Opinion in Microbiology, s. 603-604, 2012

• DOI för Bacterial genomes: Next generation sequencing technologies for studies of bacterial ecosystems

Genomic diversity of the 2011 European outbreaks of Escherichia coli O104:H4

Guy, Lionel; Jernberg, Cecilia; Ivarsson, Sofie; Hedenstrom, Ingela et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, 2012

• DOI för Genomic diversity of the 2011 European outbreaks of Escherichia coli O104:H4

Independent Genome Reduction and Phylogenetic Reclassification of the Oceanic SAR11 Clade

Viklund, Johan; Ettema, Thijs; Andersson, Siv G. E.

Ingår i Molecular biology and evolution, s. 599-615, 2011

• DOI för Independent Genome Reduction and Phylogenetic Reclassification of the Oceanic SAR11 Clade

A Phylometagenomic Exploration of Oceanic Alphaproteobacteria Reveals Mitochondrial Relatives Unrelated to the SAR11 Clade

Brindefalk, Björn; Ettema, Thijs J. G.; Viklund, Johan; Thollesson, Mikael et al.

Ingår i PLOS ONE, 2011

• DOI för A Phylometagenomic Exploration of Oceanic Alphaproteobacteria Reveals Mitochondrial Relatives Unrelated to the SAR11 Clade

genoPlotR: comparative gene and genome visualization in R

Guy, Lionel; Roat Kultima, Jens; Andersson, Siv G.E.

Ingår i Bioinformatics, s. 2334-2335, 2010

• DOI för genoPlotR: comparative gene and genome visualization in R
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Genome dynamics of Bartonella grahamii in micro-populations of woodland rodents

Berglund, Eva C.; Ehrenborg, Christian; Vinnere Pettersson, Olga; Granberg, Fredrik et al.

Ingår i BMC Genomics, s. 152, 2010

• DOI för Genome dynamics of Bartonella grahamii in micro-populations of woodland rodents

Rapid diversification by recombination in Bartonella grahamii from wild rodents in Asia contrasts with low levels of genomic divergence in Northern Europe and America

Berglund, Eva C.; Ellegaard, Kirsten; Granberg, Fredrik; Xie, Zhoupeng et al.

Ingår i Molecular Ecology, s. 2241-2255, 2010

• DOI för Rapid diversification by recombination in Bartonella grahamii from wild rodents in Asia contrasts with low levels of genomic divergence in Northern Europe and America

The BatR/BatS Two-Component Regulatory System Controls the Adaptive Response of Bartonella henselae during Human Endothelial Cell Infection

Quebatte, Maxime; Dehio, Michaela; Tropel, David; Basler, Andrea et al.

Ingår i Journal of Bacteriology, s. 3352-3367, 2010

• DOI för The BatR/BatS Two-Component Regulatory System Controls the Adaptive Response of Bartonella henselae during Human Endothelial Cell Infection

The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans

Klasson, Lisa; Westberg, Joakim; Sapountzis, Panagiotis; Näslund, Kristina et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 5725-5730, 2009

• DOI för The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans

Computational Resources in Infectious Disease: Limitations and Challenges

Berglund, Eva C.; Nystedt, Björn; Andersson, Siv G. E.

Ingår i PloS Computational Biology, 2009

• DOI för Computational Resources in Infectious Disease: Limitations and Challenges

The alpha-proteobacteria: the Darwin finches of the bacterial world

Ettema, Thijs J. G.; Andersson, Siv G. E.

Ingår i Biology Letters, s. 429-432, 2009

• DOI för The alpha-proteobacteria: the Darwin finches of the bacterial world

Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii

Berglund, Eva C.; Frank, A. Carolin; Calteau, Alexandra; Vinnere Pettersson, Olga et al.

Ingår i PLoS genetics, 2009

• DOI för Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii

Visualization of pseudogenes in intracellular bacteria reveals the different tracks to gene destruction

Fuxelius, Hans-Henrik; Darby, Alistair C.; Cho, N. H.; Andersson, Siv G. E.

Ingår i Genome Biology, 2008

• DOI för Visualization of pseudogenes in intracellular bacteria reveals the different tracks to gene destruction

Endosymbiont gene functions impaired and rescued by polymerase infidelity at poly(A) tracts

Tamas, Ivica; Wernegreen, Jennifer J; Nystedt, Björn; Kauppinen, Seth N et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 14934-14939, 2008

• DOI för Endosymbiont gene functions impaired and rescued by polymerase infidelity at poly(A) tracts

Comment on "A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea"

Ettema, Thijs; Andersson, Siv

Ingår i Science, s. 342, 2008

• DOI för Comment on "A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea"

Diversifying Selection and Concerted Evolution of a Type IV Secretion System in Bartonella

Nystedt, Björn; Frank, Carolin; Thollesson, Mikael; Andersson, Siv

Ingår i Molecular biology and evolution, s. 287-300, 2008

• DOI för Diversifying Selection and Concerted Evolution of a Type IV Secretion System in Bartonella

High-resolution genotyping of Chlamydia trachomatis strains by multilocus sequence analysis

Klint, Markus; Fuxelius, Hans-Henrik; Goldkuhl, Renée Röstlinger; Skarin, Hanna et al.

Ingår i Journal of Clinical Microbiology, s. 1410-1414, 2007

• DOI för High-resolution genotyping of Chlamydia trachomatis strains by multilocus sequence analysis

The genomic and metabolic diversity of Rickettsia

Fuxelius, Hans-Henrik; Darby, Alistair; Min, Chan-Ki; Cho, Nam-Hyuk et al.

Ingår i Research in Microbiology, s. 745-753, 2007

• DOI för The genomic and metabolic diversity of Rickettsia

Origin and evolution of the mitochondrial aminoacyl-tRNA synthetases

Brindefalk, Björn; Viklund, Johan; Larsson, Daniel; Thollesson, Mikael et al.

Ingår i Molecular biology and evolution, s. 743-756, 2007

• DOI för Origin and evolution of the mitochondrial aminoacyl-tRNA synthetases

The Orientia tsutsugamushi genome reveals massive proliferation of conjugative type IV secretion system and host–cell interaction genes

Cho, Nam-Hyuk; Kim, Hang-Rae; Lee, Jung-Hee; Kim, Se-Yoon et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 7981-7986, 2007

• DOI för The Orientia tsutsugamushi genome reveals massive proliferation of conjugative type IV secretion system and host–cell interaction genes

Protein evolutionary rates correlate with expression independently of synonymous substitutions in Helicobacter pylori

Sällström, Björn; Arnaout, Ramy A.; Davids, Wagied; Bjelkmar, Pär et al.

Ingår i Journal of Molecular Evolution, s. 600-614, 2006

• DOI för Protein evolutionary rates correlate with expression independently of synonymous substitutions in Helicobacter pylori

Genome rearrangements, deletions, and amplifications in the natural population of Bartonella henselae

Lindroos, Hillevi; Vinnere, Olga; Mira, Alex; Repsilber, Dirk et al.

Ingår i Journal of Bacteriology, s. 7426-7439, 2006

• DOI för Genome rearrangements, deletions, and amplifications in the natural population of Bartonella henselae

Strong asymmetric mutation bias in endosymbiont genomes coincide with loss of genes for replication restart pathways

Klasson, Lisa; Andersson, Siv

Ingår i Molecular biology and evolution, s. 1031-1039, 2006

• DOI för Strong asymmetric mutation bias in endosymbiont genomes coincide with loss of genes for replication restart pathways

The complete genome sequence of Francisella tularensis, the causative agent of tularemia

Larsson, Pär; Oyston, Petra; Chain, Patrick; Chu, May et al.

Ingår i Nature Genetics, s. 153-159, 2005

• DOI för The complete genome sequence of Francisella tularensis, the causative agent of tularemia

Multispacer typing technique for sequence-based typing of Bartonella quintana

Foucault, C; La Scola, B.; Lindroos, Hillevi; Andersson, Siv et al.

Ingår i Journal of Clinical Microbiology, s. 41-48, 2005

• DOI för Multispacer typing technique for sequence-based typing of Bartonella quintana

Functional divergence and horizontal transfer of type IV secretion systems

Frank, Carolin; Alsmark, Cecilia; Thollesson, Mikael; Andersson, Siv

Ingår i Molecular biology and evolution, s. 1325-36, 2005

• DOI för Functional divergence and horizontal transfer of type IV secretion systems

Characterization of the genome composition of Bartonella koehlerae by microarray comparative genomic hybridization profiling

Lindroos, Hillevi; Mira, Alex; Repsilber, Dirk; Vinnere, Olga et al.

Ingår i Journal of Bacteriology, s. 6155-6165, 2005

• DOI för Characterization of the genome composition of Bartonella koehlerae by microarray comparative genomic hybridization profiling

Genome reduction in the alpha-Proteobacteria

Sällström, Björn; Andersson, Siv

Ingår i Current Opinion in Microbiology, s. 579-585, 2005

• DOI för Genome reduction in the alpha-Proteobacteria

Data rotation improves genomotyping efficiency

Repsilber, Dirk; Mira, Alex; Lindroos, Hillevi; Andersson, Siv et al.

Ingår i Biometrical Journal, s. 585-598, 2005

• DOI för Data rotation improves genomotyping efficiency

The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae

Alsmark, Cecilia M.; Frank, A. Carolin; Karlberg, E. Olof; Legault, Boris-Antoine et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 9716-9721, 2004

• DOI för The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae

Bartonella adhesin A mediates a proangiogenic host cell response

Riess, Tanja; Andersson, Siv; Lupas, Andrei; Schaller, Martin et al.

Ingår i Journal of Experimental Medicine, s. 1267-1278, 2004

• DOI för Bartonella adhesin A mediates a proangiogenic host cell response

Proteomic analysis of the sarcosine-insoluble outer membrane fraction of the bacterial pathogen Bartonella henselae

Rhomberg, Thomas A.; Karlberg, Olof; Mini, Thierry; Zimny-Arndt, Ursula et al.

Ingår i Proteomics, s. 3021-3033, 2004

• DOI för Proteomic analysis of the sarcosine-insoluble outer membrane fraction of the bacterial pathogen Bartonella henselae

Computational inference of scenarios for alpha-proteobecterial genome evolution

Boussau, Bastien; Karlberg, Olof; Frank, Carolin; Legault, Boris-Antoine et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 9722-9727, 2004

• DOI för Computational inference of scenarios for alpha-proteobecterial genome evolution

A phylogenomic study of endosymbiotic bacteria

Canbäck, Björn; Tamas, Ivica; Andersson, Siv

Ingår i Molecular biology and evolution, s. 1110-1122, 2004

Evolution of minimal-gene-sets in host-dependent bacteria

Klasson, Lisa; Andersson, Siv

Ingår i Trends in Microbiology, s. 37-43, 2004

• DOI för Evolution of minimal-gene-sets in host-dependent bacteria

Pseudogenes, junk DNA, and the dynamics of Rickettsia genomes

Andersson, Jan O; Andersson, Siv GE

Ingår i Molecular biology and evolution, s. 829-839, 2001

A century of typhus, lice and Rickettsia

Andersson, Jan O; Andersson, Siv GE

Ingår i Research in Microbiology, s. 143-150, 2000

• DOI för A century of typhus, lice and Rickettsia

Insights into the evolutionary process of genome degradation

Andersson, Jan O; Andersson, Siv GE

Ingår i Current Opinion in Genetics and Development, s. 664-671, 1999

• DOI för Insights into the evolutionary process of genome degradation

Genome degradation is an ongoing process in Rickettsia

Andersson, Jan O; Andersson, Siv GE

Ingår i Molecular biology and evolution, s. 1178-1191, 1999

The genome sequence of Rickettsia prowazekii and the origin of mitochondria

Andersson, Siv GE; Zomorodipour, A; Andersson, Jan O; Sicheritz-Ponten, T et al.

Ingår i Nature, s. 133-140, 1998

Genomic rearrangements during evolution of the obligate intracellular parasite Rickettsia prowazekii as inferred from an analysis of 52015 bp nucleotide sequence

Andersson, Jan O; Andersson, Siv GE

Ingår i Microbiology, s. 2783-2795, 1997

Genome Evolution of a Symbiont Population for Pathogen Defence in Honeybees

Dyrhage, Karl; Garcia-Montaner, Andrea; Tamarit, Daniel; Seeger, Christian et al.

Ingår i Genome Biology and Evolution

Antibiotics should not be used for back/leg pain

Fritzell, Peter; Bergstrom, Tomas; Jonsson, Bodil; Andersson, Siv G. E. et al.

Ingår i Acta Orthopaedica, s. 1-3, 2020

• DOI för Antibiotics should not be used for back/leg pain
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The challenges of integrating two genomes in one cell

Hagström, Erik; Andersson, Siv G. E.

Ingår i Current Opinion in Microbiology, s. 89-94, 2018

• DOI för The challenges of integrating two genomes in one cell

The ecological coherence of high bacterial taxonomic ranks

Philippot, Laurent; Andersson, Siv G. E.; Battin, Tom J.; Prosser, James I. et al.

Ingår i Nature Reviews Microbiology, s. 523-529, 2010

• DOI för The ecological coherence of high bacterial taxonomic ranks

Research on small genomes: Implications for synthetic biology

Klasson, Lisa; Andersson, Siv G. E.

Ingår i Bioessays, s. 288-295, 2010

• DOI för Research on small genomes: Implications for synthetic biology

Evolutionary microbial genomics: insights into bacterial host adaptation

Toft, Christina; Andersson, Siv G. E.

Ingår i Nature reviews genetics, s. 465-475, 2010

• DOI för Evolutionary microbial genomics: insights into bacterial host adaptation

Intracellular pathogens go extreme: genome evolution in the Rickettsiales

Darby, Alistair C.; Cho, N. H.; Fuxelius, Hans-Henrik; Westberg, Joakim et al.

Ingår i Trends in Genetics, s. 511-520, 2007

• DOI för Intracellular pathogens go extreme: genome evolution in the Rickettsiales

The bacterial world gets smaller

Andersson, Siv

Ingår i Science, s. 259-260, 2006

The evolution of chronic infection strategies in the α-proteobacteria

Batut, Jacques; Andersson, Siv; O'Callaghan, David

Ingår i Nature Reviews Microbiology, s. 933-945, 2004

• DOI för The evolution of chronic infection strategies in the α-proteobacteria

Deterioration of alpha-Proteobacterial human pathogen genomes

Andersson, Siv G.E.

Ingår i Threat of Infection, s. 81-86, 2005

Evolution of subclass Candidatus Actinomarinidae inferred from single-cell amplified genomes of saltwater Actinobacteria

Zhao, Weizhou; Garcia, Sarahi L; Andersson, Siv

Rapid diversification of functional homologs in replacement genomic islands of freshwater Actinobacteria

Zhao, Weizhou; Buck, Moritz; Garcia, Sarahi L; Andersson, Siv G.E.

A phylometagenomic study based on single-cell amplified genomes from Actinobacteria in the brackish waters of the Baltic Sea

Zhao, Weizhou; Garcia, Sarahi L; Grossart, Hans-Peter; Wannicke, Nicola et al.

Comparative genomics of Lactobacillus kunkeei in two insular populations of honeybees

García-Montaner, Andrea; Tamarit, Daniel; Näslund, Kristina; Webster, Matthew Thomas et al.

Horizontal Gene Transfer Events Shaped the Heme Biosynthesis Pathway in the Anammox Bacteria

Jimenez-Gonzalez, Alejandro; Hägglund, Emil; Andersson, Siv

Mapping transcriptomics and proteomics data onto a metabolic pathway model of fructophilic lactic acid bacteria

Dyrhage, Karl; Seeger, Christian; Jimenez-Gonzalez, Alejandro; Näslund, Kristina et al.

Characterization and composition of membrane vesicles and secreted proteins in Apilactobacillus kunkeei

Seeger, Christian; Dyrhage, Karl; Näslund, Kristina; Andersson, Siv

Functionally structured genome architectures in Lactobacillus – insights into their variability and evolution

Tamarit, Daniel; Dyrhage, Karl; Edblom, Johan; Ås, Joel et al.