Publikationer

Exploiting the Asymmetric Uncertainty Structure of Pre-trained VLMs on the Unit Hypersphere

Ju, Li; Andersson, Max; Fredriksson, Stina; Glöckner, Edward et al.

2025

Konferensbidrag

On canonical differential equations for Calabi-Yau multi-scale Feynman integrals

Maggio, Sara; Sohnle, Yoann

Ingår i Journal of High Energy Physics (JHEP), 2025

Artikel i tidskrift

• DOI för On canonical differential equations for Calabi-Yau multi-scale Feynman integrals
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Dipole orientation of hydrated gas phase proteins

Agelii, Harald; Jakobsson, Ellen L. S.; De Santis, Emiliano; Elfrink, Gideon et al.

Ingår i Physical Chemistry, Chemical Physics - PCCP, 2025

Artikel i tidskrift

• DOI för Dipole orientation of hydrated gas phase proteins
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Looping the loops: a tale of elliptic dual Feynman integrals

Giroux, Mathieu; Pokraka, Andrzej; Porkert, Franziska; Sohnle, Yoann

Ingår i 16th International Symposium on Radiative Corrections, 2024

Konferensbidrag

• DOI för Looping the loops: a tale of elliptic dual Feynman integrals
• Ladda ner fulltext (pdf) av Looping the loops: a tale of elliptic dual Feynman integrals

Interpretable neural network predictions of high-intensity femtosecond x-ray free-electron laser pulses using sulfur K-shell emission spectra

Agelii, Harald; Bellisario, Alfredo; Caleman, Carl; Timneanu, Nicusor et al.

Ingår i Physical Review Research, 2025

Artikel i tidskrift

• DOI för Interpretable neural network predictions of high-intensity femtosecond x-ray free-electron laser pulses using sulfur K-shell emission spectra

Image-based tissue characterization with sound speed

Denkin, Roman; Göksel, Orcun

2025

Konferensbidrag

Modelling Population-Level Hes1 Dynamics: Insights from a Multi-framework Approach

Menz, Gesina; Engblom, Stefan

Ingår i Bulletin of Mathematical Biology, 2025

Artikel i tidskrift

• DOI för Modelling Population-Level Hes1 Dynamics: Insights from a Multi-framework Approach
• Ladda ner fulltext (pdf) av Modelling Population-Level Hes1 Dynamics: Insights from a Multi-framework Approach

Learning group invariant Calabi-Yau metrics by fundamental domain projections

Hendi, Yacoub; Larfors, Magdalena; Walden, Moritz

Ingår i Machine Learning, 2025

Artikel i tidskrift

• DOI för Learning group invariant Calabi-Yau metrics by fundamental domain projections
• Ladda ner fulltext (pdf) av Learning group invariant Calabi-Yau metrics by fundamental domain projections

Spectral properties of flipped Toeplitz matrices and computational applications

Barbarino, Giovanni; Ekström, Sven-Erik; Garoni, Carlo; Meadon, David et al.

Ingår i Applied Mathematics and Computation, 2025

Artikel i tidskrift

• DOI för Spectral properties of flipped Toeplitz matrices and computational applications
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PiNN: Equivariant Neural Network Suite for Modeling Electrochemical Systems

Li, Jichen; Knijff, Lisanne; Zhang, Zhan-Yun; Andersson, Linnéa et al.

Ingår i Journal of Chemical Theory and Computation, s. 1382-1395, 2025

Artikel i tidskrift

• DOI för PiNN: Equivariant Neural Network Suite for Modeling Electrochemical Systems
• Ladda ner fulltext (pdf) av PiNN: Equivariant Neural Network Suite for Modeling Electrochemical Systems

Topics in Cohomological Field Theory: Let's Twist Again!

Mauch, Roman

2025

Doktorsavhandling, sammanläggning

• Ladda ner fulltext (pdf) av Topics in Cohomological Field Theory: Let's Twist Again!

The Equivariant B model

Festuccia, Guido; Mauch, Roman; Zabzine, Maxim

Ingår i Journal of High Energy Physics (JHEP), 2025

Artikel i tidskrift

• DOI för The Equivariant B model
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Codimension-Two Defects and SYM on Orbifolds

Mauch, Roman; Ruggeri, Lorenzo

Ingår i Journal of High Energy Physics (JHEP), 2025

Artikel i tidskrift

• DOI för Codimension-Two Defects and SYM on Orbifolds
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From 5d flat connections to 4d fluxes (the art of slicing the cone)

Lundin, Jim; Mauch, Roman; Ruggeri, Lorenzo

Ingår i Journal of High Energy Physics (JHEP), 2023

Artikel i tidskrift

• DOI för From 5d flat connections to 4d fluxes (the art of slicing the cone)
• Ladda ner fulltext (pdf) av From 5d flat connections to 4d fluxes (the art of slicing the cone)

Probabilistic Models of Genetic Variability in Sequence Evolution

Müller-Widmann, Rebekka

2025

Doktorsavhandling, sammanläggning

• Ladda ner fulltext (pdf) av Probabilistic Models of Genetic Variability in Sequence Evolution

Global Tissue Speed-of-Sound via Comparative and Absolute Image Metrics in Ultrasound

Denkin, Roman; Göksel, Orcun

2025

Konferensbidrag

Probabilistic models of codon sequence evolution during speciation

Müller-Widmann, Rebekka; Mugal, Carina F.; Kaj, Ingemar

Manuskript (preprint)

Signatures of GC-biased gene conversion across different time scales display the underlying recombination hotspot dynamics

Müller-Widmann, Rebekka; Kaj, Ingemar; Mugal, Carina F.

Manuskript (preprint)

Assessing Image Quality Metrics for Global Sound-Speed Estimation in Ultrasound

Denkin, Roman; Göksel, Orcun

2024

Konferensbidrag

Comparative Study of Image Quality Metrics for Global Sound-Speed Estimation

Denkin, Roman; Göksel, Orcun

2024

Konferensbidrag

Detection of Extremely Sparse Key Instances in Whole Slide Cytology Images via Self-supervised One-class Representation Learning

Chatterjee, Swarnadip; Göksel, Orcun; Sladoje, Nataša; Lindblad, Joakim

Ingår i Pattern Recognition, s. 408-421, 2024

Konferensbidrag

• DOI för Detection of Extremely Sparse Key Instances in Whole Slide Cytology Images via Self-supervised One-class Representation Learning

Matrix-less spectral approximation for large structured matrices

Barbarino, Giovanni; Claesson, Melker; Ekström, Sven-Erik; Garoni, Carlo et al.

Ingår i BIT Numerical Mathematics, 2025

Artikel i tidskrift

• DOI för Matrix-less spectral approximation for large structured matrices
• Ladda ner fulltext (pdf) av Matrix-less spectral approximation for large structured matrices

Dipole and Charge Prediction for Electrochemical Systems from Atomistic Machine Learning

Knijff, Lisanne

2025

Doktorsavhandling, sammanläggning

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PiNN: equivariant neural network suite for modelling electrochemical systems

Li, Jichen; Knijff, Lisanne; Zhang, Zhan-Yun; Andersson, Linnéa et al.

2024

Artikel i tidskrift

• DOI för PiNN: equivariant neural network suite for modelling electrochemical systems

InfoHier: Hierarchical Information Extraction via Encoding and Embedding

Zhang, Tianru; Ju, Li; Singh, Prashant; Toor, Salman

Manuskript (preprint)

Modeling of Nanomaterials for Supercapacitors: Beyond Carbon Electrodes

Bi, Sheng; Knijff, Lisanne; Lian, Xiliang; van Hees, Alicia et al.

Ingår i ACS Nano, s. 19931-19949, 2024

Artikel, forskningsöversikt

• DOI för Modeling of Nanomaterials for Supercapacitors: Beyond Carbon Electrodes
• Ladda ner fulltext (pdf) av Modeling of Nanomaterials for Supercapacitors: Beyond Carbon Electrodes

Federated learning for predicting compound mechanism of action based on image-data from cell painting

Ju, Li; Hellander, Andreas; Spjuth, Ola

Ingår i Artificial Intelligence in the Life Sciences, 2024

Artikel i tidskrift

• DOI för Federated learning for predicting compound mechanism of action based on image-data from cell painting
• Ladda ner fulltext (pdf) av Federated learning for predicting compound mechanism of action based on image-data from cell painting

Accelerating Fair Federated Learning: Adaptive Federated Adam

Ju, Li; Zhang, Tianru; Toor, Salman; Hellander, Andreas

Ingår i IEEE Transactions on Machine Learning in Communications and Networking, s. 1017-1032, 2024

Artikel i tidskrift

• DOI för Accelerating Fair Federated Learning: Adaptive Federated Adam
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The soaring kite: a tale of two punctured tori

Giroux, Mathieu; Pokraka, Andrzej; Porkert, Franziska; Sohnle, Yoann

Ingår i Journal of High Energy Physics (JHEP), 2024

Artikel i tidskrift

• DOI för The soaring kite: a tale of two punctured tori
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"The six blind men and the elephant": An Interdisciplinary Selection of Measurement Features

Ellingsen, Ask; Lundholm, Douglas; Magnot, Jean-Pierre

Ingår i Geometric Methods in Physics XL, s. 275-307, 2024

Konferensbidrag

• DOI för "The six blind men and the elephant": An Interdisciplinary Selection of Measurement Features

UpStory: the uppsala storytelling dataset

Fraile, Marc; Calvo-Barajas, Natalia; Apeiron, Anastasia Sophia; Varni, Giovanna et al.

Ingår i Frontiers in Robotics and AI, 2025

Artikel i tidskrift

• DOI för UpStory: the uppsala storytelling dataset
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Computer Vision and Explainability in Human-Human and Human-Robot Interaction

Fraile, Marc

2024

Doktorsavhandling, sammanläggning

• Ladda ner fulltext (pdf) av Computer Vision and Explainability in Human-Human and Human-Robot Interaction

Are We Friends?: End-to-End Prediction of Child Rapport in Guided Play

Fraile, Marc; Varni, Giovanna; Lindblad, Joakim; Sladoje, Nataša et al.

Ingår i Computer Vision – ECCV 2024 Workshops, s. 380-392, 2024

Konferensbidrag

• DOI för Are We Friends?: End-to-End Prediction of Child Rapport in Guided Play

Super Yang-Mills on branched covers and weighted projective spaces

Mauch, Roman; Ruggeri, Lorenzo

Ingår i Journal of High Energy Physics (JHEP), 2024

Artikel i tidskrift

• DOI för Super Yang-Mills on branched covers and weighted projective spaces
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Demo Abstract: Blades: A Unified Benchmark Suite for Byzantine-Resilient in Federated Learning

Li, Shenghui; Ngait, Edith C. -H.; Ye, Fanghua; Ju, Li et al.

Ingår i 9TH ACM/IEEE CONFERENCE ON INTERNET OF THINGS DESIGN AND IMPLEMENTATION, IOTDI 2024, s. 229-230, 2024

Konferensbidrag

• DOI för Demo Abstract: Blades: A Unified Benchmark Suite for Byzantine-Resilient in Federated Learning

Blades: A Unified Benchmark Suite for Byzantine Attacks and Defenses in Federated Learning

Li, Shenghui; Ngai, Edith C. H.; Ye, Fanghua; Ju, Li et al.

Ingår i 2024 IEEE/ACM Ninth International Conference on Internet-of-Things Design and Implementation (IoTDI), s. 158-169, 2024

Konferensbidrag

• DOI för Blades: A Unified Benchmark Suite for Byzantine Attacks and Defenses in Federated Learning

A Wright-Fisher graph model and the impact of directional selection on genetic variation

Kaj, Ingemar; Mugal, Carina F.; Müller-Widmann, Rebekka

Ingår i Theoretical Population Biology, s. 13-24, 2024

Artikel i tidskrift

• DOI för A Wright-Fisher graph model and the impact of directional selection on genetic variation
• Ladda ner fulltext (pdf) av A Wright-Fisher graph model and the impact of directional selection on genetic variation

The β maps: Strong clustering and distribution results on the complex unit circle

Schiavoni-Piazza, Alec J. A.; Meadon, David; Serra, Stefano

Ingår i Linear Algebra and its Applications, s. 365-383, 2024

Artikel i tidskrift

• DOI för The β maps: Strong clustering and distribution results on the complex unit circle
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Modeling and Estimation of Impulsive Biomedical Systems

Runvik, Håkan

2023

Licentiatavhandling, sammanläggning

• Ladda ner fulltext (pdf) av Modeling and Estimation of Impulsive Biomedical Systems

Robust One-Step Estimation of Impulsive Time Series

Runvik, Håkan; Medvedev, Alexander

Manuskript (preprint)

• DOI för Robust One-Step Estimation of Impulsive Time Series

Spike timing–based coding in neuromimetic tactile system enables dynamic object classification

Chen, Libo; Karilanova, Sanja; Chaki, Soumi; Wen, Chenyu et al.

Ingår i Science, s. 660-665, 2024

Artikel i tidskrift

• DOI för Spike timing–based coding in neuromimetic tactile system enables dynamic object classification
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Reversible Hydration Enabling High-Rate Aqueous Li-Ion Batteries

Zhang, Leiting; Kühling, Franziska; Mattsson, Agnes-Matilda; Knijff, Lisanne et al.

Ingår i ACS Energy Letters, s. 959-966, 2024

Artikel i tidskrift

• DOI för Reversible Hydration Enabling High-Rate Aqueous Li-Ion Batteries
• Ladda ner fulltext (pdf) av Reversible Hydration Enabling High-Rate Aqueous Li-Ion Batteries

Predicting Ion Diffusion from the Shape of Potential Energy Landscapes

Gustafsson, Hannes; Kozdra, Melania; Smit, Berend; Barthel, Senja et al.

Ingår i Journal of Chemical Theory and Computation, s. 18-29, 2024

Artikel i tidskrift

• DOI för Predicting Ion Diffusion from the Shape of Potential Energy Landscapes
• Ladda ner fulltext (pdf) av Predicting Ion Diffusion from the Shape of Potential Energy Landscapes

Cycles in Impulsive Goodwin's Oscillators of arbitrary order☆

Proskurnikov, Anton V.; Runvik, Håkan; Medvedev, Alexander

Ingår i Automatica, 2024

Artikel i tidskrift

• DOI för Cycles in Impulsive Goodwin's Oscillators of arbitrary order☆
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PiNNwall: Heterogeneous Electrode Models from Integrating Machine Learning and Atomistic Simulation

Dufils, Thomas; Knijff, Lisanne; Shao, Yunqi; Zhang, Chao

Ingår i Journal of Chemical Theory and Computation, s. 5199-5209, 2023

Artikel i tidskrift

• DOI för PiNNwall: Heterogeneous Electrode Models from Integrating Machine Learning and Atomistic Simulation
• Ladda ner fulltext (pdf) av PiNNwall: Heterogeneous Electrode Models from Integrating Machine Learning and Atomistic Simulation

Investigating the Relevance of Contextual Information Towards Improving Deep CNN Based Oral Cancer Screening on Whole Slide Cytology Samples

Chatterjee, Swarnadip; Sladoje, Nataša; Lindblad, Joakim

2023

Konferensbidrag

A case study in designing trustworthy interactions: implications for socially assistive robotics

Zhong, Mengyu; Fraile, Marc; Castellano, Ginevra; Winkle, Katie

Ingår i Frontiers in Computer Science, 2023

Artikel i tidskrift

• DOI för A case study in designing trustworthy interactions: implications for socially assistive robotics
• Ladda ner fulltext (pdf) av A case study in designing trustworthy interactions: implications for socially assistive robotics

A numerical investigation of some RBF-FD error estimates

Larsson, Elisabeth; Mavrič, Boštjan; Michael, Andreas; Pooladi, Fatemeh

Ingår i Dolomites Research Notes on Approximation, s. 78-95, 2022

Artikel i tidskrift

• DOI för A numerical investigation of some RBF-FD error estimates

DCNN based Oral Cancer Screening using Whole Slide Cytology Images: Effect of Increased Patch Size

Chatterjee, Swarnadip; Sladoje, Nataša; Lindblad, Joakim

2022

Konferensbidrag

End-to-End Learning and Analysis of Infant Engagement During Guided Play: Prediction and Explainability

Fraile, Marc; Fawcett, Christine; Lindblad, Joakim; Sladoje, Nataša et al.

Ingår i ICMI '22, s. 444-454, 2022

Konferensbidrag

• DOI för End-to-End Learning and Analysis of Infant Engagement During Guided Play: Prediction and Explainability
• Ladda ner fulltext (pdf) av End-to-End Learning and Analysis of Infant Engagement During Guided Play: Prediction and Explainability