Lisa Klasson
Universitetslektor vid Institutionen för cell- och molekylärbiologi; Molekylär evolution
- Telefon:
- 018-471 64 03
- E-post:
- lisa.klasson@icm.uu.se
- Besöksadress:
- Husargatan 3
752 37 UPPSALA - Postadress:
- Box 596
751 24 UPPSALA
Kort presentation
I use sequencing and comparative genomics of insect associated bacterial symbionts in order to elucidate the evolutionary forces that shape these organisms and to find the underlying genetic components that are important for the interaction between the symbiotic partners. I also investigate the evolutionary impact of symbionts on their host via transcriptomics, comparative transcriptomics and genomics.
I am currently the Programme director of the Master programme in Bioinformatics.
Nyckelord
- comparative genomics
- whole-genome sequencing
- symbiosis
- genome evolution
Publikationer
Urval av publikationer
Ingår i BMC Genomics, 2019
- DOI för The effect of Wolbachia on gene expression in Drosophila paulistorum and its implications for symbiont-induced host speciation
- Ladda ner fulltext (pdf) av The effect of Wolbachia on gene expression in Drosophila paulistorum and its implications for symbiont-induced host speciation
Ingår i BMC Genomics, 2019
- DOI för Genome expansion of an obligate parthenogenesis-associated Wolbachia poses an exception to the symbiont reduction model
- Ladda ner fulltext (pdf) av Genome expansion of an obligate parthenogenesis-associated Wolbachia poses an exception to the symbiont reduction model
Ingår i G3, s. 373-374, 2018
- DOI för The Complexities and Nuances of Analyzing the Genome of Drosophila ananassae and Its Wolbachia Endosymbiont
- Ladda ner fulltext (pdf) av The Complexities and Nuances of Analyzing the Genome of Drosophila ananassae and Its Wolbachia Endosymbiont
The unpredictable road to reduction
Ingår i Nature ecology and evolution, s. 1062-1063, 2017
Ingår i Genome Biology and Evolution, s. 1779-1796, 2015
- DOI för Distinctive Genome Reduction Rates Revealed by Genomic Analyses of Two Coxiella-Like Endosymbionts in Ticks
- Ladda ner fulltext (pdf) av Distinctive Genome Reduction Rates Revealed by Genomic Analyses of Two Coxiella-Like Endosymbionts in Ticks
Comparative Genomics of Wolbachia and the Bacterial Species Concept
Ingår i PLOS Genetics, 2013
- DOI för Comparative Genomics of Wolbachia and the Bacterial Species Concept
- Ladda ner fulltext (pdf) av Comparative Genomics of Wolbachia and the Bacterial Species Concept
Horizontal gene transfer between Wolbachia and the mosquito Aedes aegypti.
Ingår i BMC Genomics, s. 33, 2009
The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans
Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 5725-5730, 2009
Genome evolution of Wolbachia strain wPip from the Culex pipiens group.
Ingår i Molecular biology and evolution, s. 1877-87, 2008
50 million years of genomic stasis in endosymbiotic bacteria.
Ingår i Science, s. 2376-9, 2002
Senaste publikationer
Saltational Episodes of Reticulate Evolution in the Drosophila saltans Species Group
Ingår i Molecular biology and evolution, 2024
- DOI för Saltational Episodes of Reticulate Evolution in the Drosophila saltans Species Group
- Ladda ner fulltext (pdf) av Saltational Episodes of Reticulate Evolution in the Drosophila saltans Species Group
Genomic changes during the evolution of the Coxiella genus along the parasitism-mutualism continuum
Ingår i Peer Community Journal, 2023
- DOI för Genomic changes during the evolution of the Coxiella genus along the parasitism-mutualism continuum
- Ladda ner fulltext (pdf) av Genomic changes during the evolution of the Coxiella genus along the parasitism-mutualism continuum
Ingår i Molecular Phylogenetics and Evolution, 2023
- DOI för Multiple introgressions shape mitochondrial evolutionary history in Drosophila paulistorum and the Drosophila willistoni group
- Ladda ner fulltext (pdf) av Multiple introgressions shape mitochondrial evolutionary history in Drosophila paulistorum and the Drosophila willistoni group
Ingår i Molecular biology and evolution, s. 2-15, 2021
- DOI för Life and Death of Selfish Genes: Comparative Genomics Reveals the Dynamic Evolution of Cytoplasmic Incompatibility
- Ladda ner fulltext (pdf) av Life and Death of Selfish Genes: Comparative Genomics Reveals the Dynamic Evolution of Cytoplasmic Incompatibility
Comparative Genomics Reveals Factors Associated with Phenotypic Expression of Wolbachia
Ingår i Genome Biology and Evolution, 2021
- DOI för Comparative Genomics Reveals Factors Associated with Phenotypic Expression of Wolbachia
- Ladda ner fulltext (pdf) av Comparative Genomics Reveals Factors Associated with Phenotypic Expression of Wolbachia
Alla publikationer
Artiklar i tidskrift
Saltational Episodes of Reticulate Evolution in the Drosophila saltans Species Group
Ingår i Molecular biology and evolution, 2024
- DOI för Saltational Episodes of Reticulate Evolution in the Drosophila saltans Species Group
- Ladda ner fulltext (pdf) av Saltational Episodes of Reticulate Evolution in the Drosophila saltans Species Group
Genomic changes during the evolution of the Coxiella genus along the parasitism-mutualism continuum
Ingår i Peer Community Journal, 2023
- DOI för Genomic changes during the evolution of the Coxiella genus along the parasitism-mutualism continuum
- Ladda ner fulltext (pdf) av Genomic changes during the evolution of the Coxiella genus along the parasitism-mutualism continuum
Ingår i Molecular Phylogenetics and Evolution, 2023
- DOI för Multiple introgressions shape mitochondrial evolutionary history in Drosophila paulistorum and the Drosophila willistoni group
- Ladda ner fulltext (pdf) av Multiple introgressions shape mitochondrial evolutionary history in Drosophila paulistorum and the Drosophila willistoni group
Ingår i Molecular biology and evolution, s. 2-15, 2021
- DOI för Life and Death of Selfish Genes: Comparative Genomics Reveals the Dynamic Evolution of Cytoplasmic Incompatibility
- Ladda ner fulltext (pdf) av Life and Death of Selfish Genes: Comparative Genomics Reveals the Dynamic Evolution of Cytoplasmic Incompatibility
Comparative Genomics Reveals Factors Associated with Phenotypic Expression of Wolbachia
Ingår i Genome Biology and Evolution, 2021
- DOI för Comparative Genomics Reveals Factors Associated with Phenotypic Expression of Wolbachia
- Ladda ner fulltext (pdf) av Comparative Genomics Reveals Factors Associated with Phenotypic Expression of Wolbachia
Ingår i Molecular Ecology, s. 6259-6272, 2021
- DOI för Comparative genome sequencing reveals insights into the dynamics of Wolbachia in native and invasive cherry fruit flies
- Ladda ner fulltext (pdf) av Comparative genome sequencing reveals insights into the dynamics of Wolbachia in native and invasive cherry fruit flies
Ingår i Genome Biology and Evolution, s. 720-735, 2020
- DOI för Parallel Sequencing of Wolbachia wCer2 from Donor and Novel Hosts Reveals Multiple Incompatibility Factors and Genome Stability after Host Transfers
- Ladda ner fulltext (pdf) av Parallel Sequencing of Wolbachia wCer2 from Donor and Novel Hosts Reveals Multiple Incompatibility Factors and Genome Stability after Host Transfers
Ingår i BMC Genomics, 2019
- DOI för The effect of Wolbachia on gene expression in Drosophila paulistorum and its implications for symbiont-induced host speciation
- Ladda ner fulltext (pdf) av The effect of Wolbachia on gene expression in Drosophila paulistorum and its implications for symbiont-induced host speciation
Ingår i BMC Genomics, 2019
- DOI för Genome expansion of an obligate parthenogenesis-associated Wolbachia poses an exception to the symbiont reduction model
- Ladda ner fulltext (pdf) av Genome expansion of an obligate parthenogenesis-associated Wolbachia poses an exception to the symbiont reduction model
Ingår i G3, s. 373-374, 2018
- DOI för The Complexities and Nuances of Analyzing the Genome of Drosophila ananassae and Its Wolbachia Endosymbiont
- Ladda ner fulltext (pdf) av The Complexities and Nuances of Analyzing the Genome of Drosophila ananassae and Its Wolbachia Endosymbiont
The unpredictable road to reduction
Ingår i Nature ecology and evolution, s. 1062-1063, 2017
Ingår i Genome Biology and Evolution, s. 1779-1796, 2015
- DOI för Distinctive Genome Reduction Rates Revealed by Genomic Analyses of Two Coxiella-Like Endosymbionts in Ticks
- Ladda ner fulltext (pdf) av Distinctive Genome Reduction Rates Revealed by Genomic Analyses of Two Coxiella-Like Endosymbionts in Ticks
Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae
Ingår i BMC Genomics, s. 1097, 2014
- DOI för Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae
- Ladda ner fulltext (pdf) av Extensive duplication of the Wolbachia DNA in chromosome four of Drosophila ananassae
Ingår i BMC Microbiology, s. 121, 2014
- DOI för More than fishing in the dark: PCR of a dispersed sequence produces simple but ultrasensitive Wolbachia detection
- Ladda ner fulltext (pdf) av More than fishing in the dark: PCR of a dispersed sequence produces simple but ultrasensitive Wolbachia detection
Comparative Genomics of Wolbachia and the Bacterial Species Concept
Ingår i PLOS Genetics, 2013
- DOI för Comparative Genomics of Wolbachia and the Bacterial Species Concept
- Ladda ner fulltext (pdf) av Comparative Genomics of Wolbachia and the Bacterial Species Concept
Ingår i PLOS ONE, 2013
- DOI för Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations
- Ladda ner fulltext (pdf) av Testing the Reproducibility of Multiple Displacement Amplification on Genomes of Clonal Endosymbiont Populations
The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes
Ingår i PLOS ONE, 2013
- DOI för The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes
- Ladda ner fulltext (pdf) av The Diversity and Evolution of Wolbachia Ankyrin Repeat Domain Genes
The Norway spruce genome sequence and conifer genome evolution
Ingår i Nature, s. 579-584, 2013
- DOI för The Norway spruce genome sequence and conifer genome evolution
- Ladda ner fulltext (pdf) av The Norway spruce genome sequence and conifer genome evolution
Horizontal gene transfer between Wolbachia and the mosquito Aedes aegypti.
Ingår i BMC Genomics, s. 33, 2009
The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans
Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 5725-5730, 2009
Genome evolution of Wolbachia strain wPip from the Culex pipiens group.
Ingår i Molecular biology and evolution, s. 1877-87, 2008
Ankyrin repeat domain-encoding genes in the wPip strain of Wolbachia from the Culex pipiens group.
Ingår i BMC Biology, s. 39, 2007
Evolution of minimal-gene-sets in host-dependent bacteria.
Ingår i Trends in Microbiology, s. 37-43, 2004
Evolution of minimal-gene-sets in host-dependent bacteria
Ingår i Trends in Microbiology, s. 37-43, 2004
50 million years of genomic stasis in endosymbiotic bacteria.
Ingår i Science, s. 2376-9, 2002
Comparative genomics of microbial pathogens and symbionts.
Ingår i Bioinformatics, 2002
Microbial genome evolution: sources of variability.
Ingår i Current Opinion in Microbiology, s. 506-12, 2002
Ingår i Journal of Applied Microbiology, s. 614-20, 2001
Mutualists and parasites: how to paint yourself into a (metabolic) corner.
Ingår i FEBS Letters, s. 135-9, 2001
Artiklar, forskningsöversikt
Research on small genomes: Implications for synthetic biology
Ingår i Bioessays, s. 288-295, 2010