Vinodh Kandavalli

Rapid label-free identification of seven bacterial species using microfluidics, single-cell time-lapse phase-contrast microscopy, and deep learning-based image and video classification

Hallström, Erik; Kandavalli, Vinodh; Wählby, Carolina; Hast, Anders

Ingår i PLOS ONE, 2025

• DOI för Rapid label-free identification of seven bacterial species using microfluidics, single-cell time-lapse phase-contrast microscopy, and deep learning-based image and video classification
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Culture-free detection of bacteria from blood for rapid sepsis diagnosis

Miguelez, M. Henar Marino; Osaid, Mohammad; Hallström, Erik; Kaya, Kerem et al.

Ingår i npj Digital Medicine, 2025

• DOI för Culture-free detection of bacteria from blood for rapid sepsis diagnosis
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Bimodality in E. coli gene expression: Sources and robustness to genome-wide stresses

Baptista, Ines S. C.; Dash, Suchintak; Arsh, Amir M.; Kandavalli, Vinodh et al.

Ingår i PloS Computational Biology, 2025

• DOI för Bimodality in E. coli gene expression: Sources and robustness to genome-wide stresses
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Anti-correlation of LacI association and dissociation rates observed in living cells

Kandavalli, Vinodh; Zikrin, Spartak; Elf, Johan; Jones, Daniel

Ingår i Nature Communications, 2025

• DOI för Anti-correlation of LacI association and dissociation rates observed in living cells
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A library of reporters of the global regulators of gene expression in Escherichia coli

Dash, Suchintak; Jagadeesan, Rahul; Baptista, Ines S. C.; Chauhan, Vatsala et al.

Ingår i mSystems, s. 1-21, 2024

• DOI för A library of reporters of the global regulators of gene expression in Escherichia coli
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Rapid label-free identification of seven bacterial species using microfluidics, single-cell time-lapse phase-contrast microscopy, and deep learning-based image and video classification

Hallström, Erik; Kandavalli, Vinodh; Wählby, Carolina; Hast, Anders

Ingår i PLOS ONE, 2025

• DOI för Rapid label-free identification of seven bacterial species using microfluidics, single-cell time-lapse phase-contrast microscopy, and deep learning-based image and video classification
• Ladda ner fulltext (pdf) av Rapid label-free identification of seven bacterial species using microfluidics, single-cell time-lapse phase-contrast microscopy, and deep learning-based image and video classification

Culture-free detection of bacteria from blood for rapid sepsis diagnosis

Miguelez, M. Henar Marino; Osaid, Mohammad; Hallström, Erik; Kaya, Kerem et al.

Ingår i npj Digital Medicine, 2025

• DOI för Culture-free detection of bacteria from blood for rapid sepsis diagnosis
• Ladda ner fulltext (pdf) av Culture-free detection of bacteria from blood for rapid sepsis diagnosis

Bimodality in E. coli gene expression: Sources and robustness to genome-wide stresses

Baptista, Ines S. C.; Dash, Suchintak; Arsh, Amir M.; Kandavalli, Vinodh et al.

Ingår i PloS Computational Biology, 2025

• DOI för Bimodality in E. coli gene expression: Sources and robustness to genome-wide stresses
• Ladda ner fulltext (pdf) av Bimodality in E. coli gene expression: Sources and robustness to genome-wide stresses

Anti-correlation of LacI association and dissociation rates observed in living cells

Kandavalli, Vinodh; Zikrin, Spartak; Elf, Johan; Jones, Daniel

Ingår i Nature Communications, 2025

• DOI för Anti-correlation of LacI association and dissociation rates observed in living cells
• Ladda ner fulltext (pdf) av Anti-correlation of LacI association and dissociation rates observed in living cells

A library of reporters of the global regulators of gene expression in Escherichia coli

Dash, Suchintak; Jagadeesan, Rahul; Baptista, Ines S. C.; Chauhan, Vatsala et al.

Ingår i mSystems, s. 1-21, 2024

• DOI för A library of reporters of the global regulators of gene expression in Escherichia coli
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Label-free deep learning-based species classification of bacteria imaged by phase-contrast microscopy

Hallström, Erik; Kandavalli, Vinodh; Ranefall, Petter; Elf, Johan et al.

Ingår i PloS Computational Biology, 2023

• DOI för Label-free deep learning-based species classification of bacteria imaged by phase-contrast microscopy
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Analytical kinetic model of native tandem promoters in E. coli

Chauhan, Vatsala; Bahrudeen, Mohamed N.M.; Palma, Cristina S.D.; Baptista, Ines S.C. et al.

Ingår i PloS Computational Biology, 2022

• DOI för Analytical kinetic model of native tandem promoters in E. coli
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Sequence-dependent model of genes with dual s factor preference

Baptista, Ines S. C.; Kandavalli, Vinodh; Chauhan, Vatsala; Bahrudeen, Mohamed N. M. et al.

Ingår i Biochimica et Biophysica Acta. Gene Regulatory Mechanisms, 2022

• DOI för Sequence-dependent model of genes with dual s factor preference
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The transcription factor network of E. coli steers global responses to shifts in RNAP concentration

L. B. Almeida, Bilena; M. Bahrudeen, Mohamed N.; Chauhan, Vatsala; Dash, Suchintak et al.

Ingår i Nucleic Acids Research, s. 6801-6819, 2022

• DOI för The transcription factor network of E. coli steers global responses to shifts in RNAP concentration
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Rapid antibiotic susceptibility testing and species identification for mixed samples

Kandavalli, Vinodh; Karempudi, Praneeth; Larsson, Jimmy; Elf, Johan

Ingår i Nature Communications, 2022

• DOI för Rapid antibiotic susceptibility testing and species identification for mixed samples
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An Optical Pooled Screening Platform for Single-Molecule Measurements in Live Cells: A Pilot Study

Yuan, Jinwen; Kandavalli, Vinodh; Sirman, Dvir; Zikrin, Spartak et al.