Patrick Micke

Incremental prognostic value of immune cell densities beyond clinical parameters in non-small cell lung cancer

Nordling, Love; Backman, Max; Mezheyeuski, Artur; Lindblad, Joakim et al.

Ingår i Lung Cancer, 2026

• DOI för Incremental prognostic value of immune cell densities beyond clinical parameters in non-small cell lung cancer
• Ladda ner fulltext (pdf) av Incremental prognostic value of immune cell densities beyond clinical parameters in non-small cell lung cancer

In situ mapping of activated PDGFRβ defines a prognostic discrepancy between histological subtypes of NSCLC

Lindberg, Amanda; Hellberg, Louise; Grandon, Anaïs; Yu, Hui et al.

Ingår i Cell Communication and Signaling, 2026

• DOI för In situ mapping of activated PDGFRβ defines a prognostic discrepancy between histological subtypes of NSCLC
• Ladda ner fulltext (pdf) av In situ mapping of activated PDGFRβ defines a prognostic discrepancy between histological subtypes of NSCLC

Spatial TCR clonality and clonal expansion in the in situ microenvironment of non-small cell lung cancer

Yu, Hui; Magoulopoulou, Anastasia; Amini, Rose-Marie; Chatzinikolaou, Maria Paraskevi et al.

Ingår i Journal for ImmunoTherapy of Cancer, 2025

• DOI för Spatial TCR clonality and clonal expansion in the in situ microenvironment of non-small cell lung cancer
• Ladda ner fulltext (pdf) av Spatial TCR clonality and clonal expansion in the in situ microenvironment of non-small cell lung cancer

In situ detection of PD1–PD-L1 interactions as a functional predictor for response to immune checkpoint inhibition in NSCLC

Lindberg, Amanda; Muhl, Lars; Yu, Hui; Hellberg, Louise et al.

Ingår i Journal of Thoracic Oncology, s. 625-640, 2025

• DOI för In situ detection of PD1–PD-L1 interactions as a functional predictor for response to immune checkpoint inhibition in NSCLC
• Ladda ner fulltext (pdf) av In situ detection of PD1–PD-L1 interactions as a functional predictor for response to immune checkpoint inhibition in NSCLC

Isolated Channel Vision Transformers: From Single-Channel Pretraining to Multi-Channel Finetuning

Lian, Wenyi; Micke, Patrick; Lindblad, Joakim; Sladoje, Nataša

2025

Incremental prognostic value of immune cell densities beyond clinical parameters in non-small cell lung cancer

Nordling, Love; Backman, Max; Mezheyeuski, Artur; Lindblad, Joakim et al.

Ingår i Lung Cancer, 2026

• DOI för Incremental prognostic value of immune cell densities beyond clinical parameters in non-small cell lung cancer
• Ladda ner fulltext (pdf) av Incremental prognostic value of immune cell densities beyond clinical parameters in non-small cell lung cancer

In situ mapping of activated PDGFRβ defines a prognostic discrepancy between histological subtypes of NSCLC

Lindberg, Amanda; Hellberg, Louise; Grandon, Anaïs; Yu, Hui et al.

Ingår i Cell Communication and Signaling, 2026

• DOI för In situ mapping of activated PDGFRβ defines a prognostic discrepancy between histological subtypes of NSCLC
• Ladda ner fulltext (pdf) av In situ mapping of activated PDGFRβ defines a prognostic discrepancy between histological subtypes of NSCLC

Spatial TCR clonality and clonal expansion in the in situ microenvironment of non-small cell lung cancer

Yu, Hui; Magoulopoulou, Anastasia; Amini, Rose-Marie; Chatzinikolaou, Maria Paraskevi et al.

Ingår i Journal for ImmunoTherapy of Cancer, 2025

• DOI för Spatial TCR clonality and clonal expansion in the in situ microenvironment of non-small cell lung cancer
• Ladda ner fulltext (pdf) av Spatial TCR clonality and clonal expansion in the in situ microenvironment of non-small cell lung cancer

In situ detection of PD1–PD-L1 interactions as a functional predictor for response to immune checkpoint inhibition in NSCLC

Lindberg, Amanda; Muhl, Lars; Yu, Hui; Hellberg, Louise et al.

Ingår i Journal of Thoracic Oncology, s. 625-640, 2025

• DOI för In situ detection of PD1–PD-L1 interactions as a functional predictor for response to immune checkpoint inhibition in NSCLC
• Ladda ner fulltext (pdf) av In situ detection of PD1–PD-L1 interactions as a functional predictor for response to immune checkpoint inhibition in NSCLC

scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples

Yadav, Ram Prakash; Xing, Pengwei; Zhao, Miao; Hollander, Peter et al.

Ingår i Nature Communications, 2025

• DOI för scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples
• Ladda ner fulltext (pdf) av scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples

Prospective validation of ORACLE, a clonal expression biomarker associated with survival of patients with lung adenocarcinoma

Biswas, Dhruva; Liu, Yun-Hsin; Herrero, Javier; Wu, Yin et al.

Ingår i Nature Cancer, s. 86-101, 2025

• DOI för Prospective validation of ORACLE, a clonal expression biomarker associated with survival of patients with lung adenocarcinoma
• Ladda ner fulltext (pdf) av Prospective validation of ORACLE, a clonal expression biomarker associated with survival of patients with lung adenocarcinoma

The transcription factor LHX2 mediates and enhances oncogenic BMP signaling in medulloblastoma

Ohata, Yae; Ali, Mohamad M.; Tsubakihara, Yutaro; Itoh, Yuka et al.

Ingår i Cell Death and Differentiation, s. 1915-1929, 2025

• DOI för The transcription factor LHX2 mediates and enhances oncogenic BMP signaling in medulloblastoma
• Ladda ner fulltext (pdf) av The transcription factor LHX2 mediates and enhances oncogenic BMP signaling in medulloblastoma

Unlocking novel T cell-based immunotherapy for hepatocellular carcinoma through neoantigen-driven T cell receptor isolation

Maravelia, Panagiota; Yao, Haidong; Cai, Curtis; Silva, Daniela Nascimento et al.

Ingår i Gut, s. 1125-1136, 2025

• DOI för Unlocking novel T cell-based immunotherapy for hepatocellular carcinoma through neoantigen-driven T cell receptor isolation
• Ladda ner fulltext (pdf) av Unlocking novel T cell-based immunotherapy for hepatocellular carcinoma through neoantigen-driven T cell receptor isolation

Tumoral pSMAD2 as a prognostic biomarker in early-stage breast cancer: insights from the randomized SweBCG91RT trial

Tullberg, Axel Stenmark; Thurfjell, Viktoria; Kovacs, Aniko; Micke, Patrick et al.

Ingår i Breast Cancer Research and Treatment, s. 499-509, 2025

• DOI för Tumoral pSMAD2 as a prognostic biomarker in early-stage breast cancer: insights from the randomized SweBCG91RT trial
• Ladda ner fulltext (pdf) av Tumoral pSMAD2 as a prognostic biomarker in early-stage breast cancer: insights from the randomized SweBCG91RT trial

Spatial distribution of tertiary lymphoid structures in the molecular and clinical context of non-small cell lung cancer.

Elfving, Hedvig; Yu, Hui; Kassete Fessehatsio, Kaleab; Brunnström, Hans et al.

Ingår i Cellular Oncology, s. 801-808, 2025

• DOI för Spatial distribution of tertiary lymphoid structures in the molecular and clinical context of non-small cell lung cancer.
• Ladda ner fulltext (pdf) av Spatial distribution of tertiary lymphoid structures in the molecular and clinical context of non-small cell lung cancer.

Predictors of survival and recurrence patterns following definitive chemoradiotherapy in stage III non-small cell lung cancer: a retrospective cohort study

Broström, Erika; Isaksson, Johan; Xanthoulis, Panagiotis; Börjesson, Rebecka et al.

Ingår i Translational Lung Cancer Research, s. 1972-1985, 2025

• DOI för Predictors of survival and recurrence patterns following definitive chemoradiotherapy in stage III non-small cell lung cancer: a retrospective cohort study
• Ladda ner fulltext (pdf) av Predictors of survival and recurrence patterns following definitive chemoradiotherapy in stage III non-small cell lung cancer: a retrospective cohort study

Gene expression-based identification of prognostic markers in lung adenocarcinoma

Salomonsson, Annette; Ehinger, Daniel; Jonsson, Mats; Botling, Johan et al.

Ingår i PLOS ONE, 2025

• DOI för Gene expression-based identification of prognostic markers in lung adenocarcinoma
• Ladda ner fulltext (pdf) av Gene expression-based identification of prognostic markers in lung adenocarcinoma

Diagnostic gastrointestinal markers in primary lung cancer and pulmonary metastases

Malmros, Karina; Lindholm, Andreas; Vidarsdottir, Halla; Jirström, Karin et al.

Ingår i Virchows Archiv, s. 347-357, 2024

• DOI för Diagnostic gastrointestinal markers in primary lung cancer and pulmonary metastases
• Ladda ner fulltext (pdf) av Diagnostic gastrointestinal markers in primary lung cancer and pulmonary metastases

The histological growth patterns in liver metastases from colorectal cancer display differences in lymphoid, myeloid, and mesenchymal cells

Garcia-Vicien, Gemma; Ruiz, Nuria; Micke, Patrick; Ruffinelli, Jose Carlos et al.

Ingår i MEDCOMM, 2024

• DOI för The histological growth patterns in liver metastases from colorectal cancer display differences in lymphoid, myeloid, and mesenchymal cells
• Ladda ner fulltext (pdf) av The histological growth patterns in liver metastases from colorectal cancer display differences in lymphoid, myeloid, and mesenchymal cells

Use of beta-blockers in patients with ductal carcinoma in situ and risk of invasive breast cancer recurrence: a Swedish retrospective cohort study

Strell, Carina; Smith, Daniel Robert; Valachis, Antonis; Woldeyesus, Hellen et al.

Ingår i Breast Cancer Research and Treatment, s. 293-299, 2024

• DOI för Use of beta-blockers in patients with ductal carcinoma in situ and risk of invasive breast cancer recurrence: a Swedish retrospective cohort study
• Ladda ner fulltext (pdf) av Use of beta-blockers in patients with ductal carcinoma in situ and risk of invasive breast cancer recurrence: a Swedish retrospective cohort study

Distinct microRNA Signature and Suppression of ZFP36L1 Define ASCL1-Positive Lung Adenocarcinoma

Enokido, Takayoshi; Horie, Masafumi; Yoshino, Seiko; Suzuki, Hiroshi I. et al.

Ingår i Molecular Cancer Research, s. 29-40, 2024

• DOI för Distinct microRNA Signature and Suppression of ZFP36L1 Define ASCL1-Positive Lung Adenocarcinoma

Tumor Heterogeneity Confounds Lymphocyte Metrics in Diagnostic Lung Cancer Biopsies

Elfving, Hedvig; Thurfjell, Viktoria; Mattsson, Johanna Sofia Margareta; Backman, Max et al.

Ingår i Archives of Pathology & Laboratory Medicine, 2024

• DOI för Tumor Heterogeneity Confounds Lymphocyte Metrics in Diagnostic Lung Cancer Biopsies
• Ladda ner fulltext (pdf) av Tumor Heterogeneity Confounds Lymphocyte Metrics in Diagnostic Lung Cancer Biopsies

Phenotypic characterization of spatial immune infiltration niches in non-small cell lung cancer

Gerdtsson, Anna Sandström; Knulst, Mattis; Botling, Johan; Mezheyeuski, Artur et al.

Ingår i Oncoimmunology, 2023

• DOI för Phenotypic characterization of spatial immune infiltration niches in non-small cell lung cancer
• Ladda ner fulltext (pdf) av Phenotypic characterization of spatial immune infiltration niches in non-small cell lung cancer

An immune score reflecting pro- and anti-tumoural balance of tumour microenvironment has major prognostic impact and predicts immunotherapy response in solid cancers

Mezheyeuski, Artur; Backman, Max; Mattsson, Johanna Sofia Margareta; Martin-Bernabe, Alfonso et al.

Ingår i eBioMedicine, 2023

• DOI för An immune score reflecting pro- and anti-tumoural balance of tumour microenvironment has major prognostic impact and predicts immunotherapy response in solid cancers
• Ladda ner fulltext (pdf) av An immune score reflecting pro- and anti-tumoural balance of tumour microenvironment has major prognostic impact and predicts immunotherapy response in solid cancers

Fibroblast subsets in non-small cell lung cancer: Associations with survival, mutations, and immune features

Pellinen, Teijo; Paavolainen, Lassi; Martín-Bernabé, Alfonso; Papatella Araujo, Renata et al.

Ingår i Journal of the National Cancer Institute, s. 71-82, 2023

• DOI för Fibroblast subsets in non-small cell lung cancer: Associations with survival, mutations, and immune features
• Ladda ner fulltext (pdf) av Fibroblast subsets in non-small cell lung cancer: Associations with survival, mutations, and immune features

Expression of cancer-testis antigens in the immune microenvironment of non-small cell lung cancer

Hikmet Noraddin, Feria; Rassy, Marc; Backman, Max; Méar, Loren et al.

Ingår i Molecular Oncology, s. 2603-2617, 2023

• DOI för Expression of cancer-testis antigens in the immune microenvironment of non-small cell lung cancer
• Ladda ner fulltext (pdf) av Expression of cancer-testis antigens in the immune microenvironment of non-small cell lung cancer

Spatial immunophenotyping of the tumour microenvironment in non-small cell lung cancer

Backman, Max; Strell, Carina; Lindberg, Amanda; Mattsson, Johanna S. M. et al.

Ingår i European Journal of Cancer, s. 40-52, 2023

• DOI för Spatial immunophenotyping of the tumour microenvironment in non-small cell lung cancer
• Ladda ner fulltext (pdf) av Spatial immunophenotyping of the tumour microenvironment in non-small cell lung cancer

Matched Analyses of Brain Metastases versus Primary Non-Small Cell Lung Cancer Reveal a Unique microRNA Signature

Tsakonas, Georgios; Koulouris, Andreas; Kazmierczak, Dominika; Botling, Johan et al.

Ingår i International Journal of Molecular Sciences, 2023

• DOI för Matched Analyses of Brain Metastases versus Primary Non-Small Cell Lung Cancer Reveal a Unique microRNA Signature
• Ladda ner fulltext (pdf) av Matched Analyses of Brain Metastases versus Primary Non-Small Cell Lung Cancer Reveal a Unique microRNA Signature

A Novel Pancreatic Cancer Mini-tumor Model to Study Desmoplasia and Myofibroblastic Cancer-Associated Fibroblast Differentiation

Harryvan, T.J.; Hawinkels, L.J.A.C.; Inderson, A.; van Hooft, J.E. et al.

Ingår i Gastro Hep Advances, s. 678-681, 2022

• DOI för A Novel Pancreatic Cancer Mini-tumor Model to Study Desmoplasia and Myofibroblastic Cancer-Associated Fibroblast Differentiation
• Ladda ner fulltext (pdf) av A Novel Pancreatic Cancer Mini-tumor Model to Study Desmoplasia and Myofibroblastic Cancer-Associated Fibroblast Differentiation

Comparison of ROS1-rearrangement detection methods in a cohort of surgically resected non-small cell lung carcinomas

Thurfjell, Viktoria; Micke, Patrick; Yu, Hui; Krupar, Rosemarie et al.

Ingår i Translational Lung Cancer Research, s. 2477-2494, 2022

• DOI för Comparison of ROS1-rearrangement detection methods in a cohort of surgically resected non-small cell lung carcinomas
• Ladda ner fulltext (pdf) av Comparison of ROS1-rearrangement detection methods in a cohort of surgically resected non-small cell lung carcinomas

Highly elevated systemic inflammation is a strong independent predictor of early mortality in advanced non-small cell lung cancer

Isaksson, Johan; Wennström, Leo; Brandén, Eva; Koyi, Hirsh et al.

Ingår i Cancer Treatment and Research Communications, 2022

• DOI för Highly elevated systemic inflammation is a strong independent predictor of early mortality in advanced non-small cell lung cancer
• Ladda ner fulltext (pdf) av Highly elevated systemic inflammation is a strong independent predictor of early mortality in advanced non-small cell lung cancer

Spatial Immunology in Liver Metastases from Colorectal Carcinoma according to the Histologic Growth Pattern

Garcia-Vicien, Gemma; Mezheyeuski, Artur; Micke, Patrick; Ruiz, Nuria et al.

Ingår i Cancers, 2022

• DOI för Spatial Immunology in Liver Metastases from Colorectal Carcinoma according to the Histologic Growth Pattern
• Ladda ner fulltext (pdf) av Spatial Immunology in Liver Metastases from Colorectal Carcinoma according to the Histologic Growth Pattern

Prognostic Significance of the Loss of Heterozygosity of KRAS in Early-Stage Lung Adenocarcinoma

Khadse, Anand; Haakensen, Vilde D.; Silwal-Pandit, Laxmi; Hamfjord, Julian et al.

Ingår i Frontiers in Oncology, 2022

• DOI för Prognostic Significance of the Loss of Heterozygosity of KRAS in Early-Stage Lung Adenocarcinoma
• Ladda ner fulltext (pdf) av Prognostic Significance of the Loss of Heterozygosity of KRAS in Early-Stage Lung Adenocarcinoma

Difficulties in diagnostics of lung tumours in biopsies: an interpathologist concordance study evaluating the international diagnostic guidelines

Ericson Lindquist, Kajsa; Ciornei, Cristina; Westbom-Fremer, Sofia; Gudinaviciene, Inga et al.

Ingår i Journal of Clinical Pathology, s. 302-309, 2022

• DOI för Difficulties in diagnostics of lung tumours in biopsies: an interpathologist concordance study evaluating the international diagnostic guidelines
• Ladda ner fulltext 1 (pdf) av Difficulties in diagnostics of lung tumours in biopsies: an interpathologist concordance study evaluating the international diagnostic guidelines
• Ladda ner fulltext 2 (pdf) av Difficulties in diagnostics of lung tumours in biopsies: an interpathologist concordance study evaluating the international diagnostic guidelines

Expression of cartilage oligomeric matrix protein in periampullary adenocarcinoma is associated with pancreatobiliary-type morphology, higher levels of fibrosis and immune cell exclusion

Papadakos, Konstantinos S.; Lundgren, Sebastian; Gialeli, Chrysostomi; Micke, Patrick et al.

Ingår i Oncoimmunology, 2022

• DOI för Expression of cartilage oligomeric matrix protein in periampullary adenocarcinoma is associated with pancreatobiliary-type morphology, higher levels of fibrosis and immune cell exclusion
• Ladda ner fulltext (pdf) av Expression of cartilage oligomeric matrix protein in periampullary adenocarcinoma is associated with pancreatobiliary-type morphology, higher levels of fibrosis and immune cell exclusion

Tumour-infiltrating lymphocytes add prognostic information for patients with low-risk DCIS: findings from the SweDCIS randomised radiotherapy trial

Schiza, Aglaia; Thurfjell, Viktoria; Stenmark Tullberg, Axel; Olofsson, Helena et al.

Ingår i European Journal of Cancer, s. 128-137, 2022

• DOI för Tumour-infiltrating lymphocytes add prognostic information for patients with low-risk DCIS: findings from the SweDCIS randomised radiotherapy trial
• Ladda ner fulltext (pdf) av Tumour-infiltrating lymphocytes add prognostic information for patients with low-risk DCIS: findings from the SweDCIS randomised radiotherapy trial

Plasma Proteomic Analysis in Non-Small Cell Lung Cancer Patients Treated with PD-1/PD-L1 Blockade

Eltahir, Mohamed; Isaksson, Johan; Mattsson, Johanna Sofia Margareta; Karre, Klas et al.

Ingår i Cancers, 2021

• DOI för Plasma Proteomic Analysis in Non-Small Cell Lung Cancer Patients Treated with PD-1/PD-L1 Blockade
• Ladda ner fulltext (pdf) av Plasma Proteomic Analysis in Non-Small Cell Lung Cancer Patients Treated with PD-1/PD-L1 Blockade

The prognostic impact of the tumour stroma fraction: A machine learning-based analysis in 16 human solid tumour types

Micke, Patrick; Strell, Carina; Mattsson, Johanna Sofia Margareta; Martin-Bernabe, Alfonso et al.

Ingår i eBioMedicine, 2021

• DOI för The prognostic impact of the tumour stroma fraction: A machine learning-based analysis in 16 human solid tumour types
• Ladda ner fulltext (pdf) av The prognostic impact of the tumour stroma fraction: A machine learning-based analysis in 16 human solid tumour types

Infiltration of NK and plasma cells is associated with a distinct immune subset in non‐small cell lung cancer

Backman, Max; La Fleur, Linnea; Kurppa, Pinja; Djureinovic, Dijana et al.

Ingår i Journal of Pathology, s. 243-256, 2021

• DOI för Infiltration of NK and plasma cells is associated with a distinct immune subset in non‐small cell lung cancer
• Ladda ner fulltext (pdf) av Infiltration of NK and plasma cells is associated with a distinct immune subset in non‐small cell lung cancer

PD-L1 amplification is associated with an immune cell rich phenotype in squamous cell cancer of the lung

Goldmann, Torsten; Marwitz, Sebastian; Nitschkowski, Dorte; Krupar, Rosemarie et al.

Ingår i Cancer Immunology and Immunotherapy, s. 2577-2587, 2021

• DOI för PD-L1 amplification is associated with an immune cell rich phenotype in squamous cell cancer of the lung
• Ladda ner fulltext (pdf) av PD-L1 amplification is associated with an immune cell rich phenotype in squamous cell cancer of the lung

Evaluation of NTRK immunohistochemistry as a screening method for NTRK gene fusion detection in non-small cell lung cancer

Elfving, Hedvig; Broström, Erika; Moens, Lotte N.J.; Almlöf, Jonas et al.

Ingår i Lung Cancer, s. 53-59, 2021

• DOI för Evaluation of NTRK immunohistochemistry as a screening method for NTRK gene fusion detection in non-small cell lung cancer

Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene

Doffe, Flora; Carbonnier, Vincent; Tissier, Manon; Leroy, Bernard et al.

Ingår i Cell Death and Differentiation, s. 1477-1492, 2021

• DOI för Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene
• Ladda ner fulltext (pdf) av Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene

Plasma Proteome Fingerprints Reveal Distinctiveness and Clinical Outcome of SARS-CoV-2 Infection

Bauer, Wolfgang; Weber, Marcus; Diehl-Wiesenecker, Eva; Galtung, Noa et al.

Ingår i Viruses, 2021

• DOI för Plasma Proteome Fingerprints Reveal Distinctiveness and Clinical Outcome of SARS-CoV-2 Infection
• Ladda ner fulltext (pdf) av Plasma Proteome Fingerprints Reveal Distinctiveness and Clinical Outcome of SARS-CoV-2 Infection

Targeting hepatocyte growth factor in epithelial-stromal interactions in an in vitro experimental model of human periodontitis

Yamaguchi, Yoko; Saito, Akira; Horie, Masafumi; Aoki, Akira et al.

Ingår i Odontology, s. 912-920, 2021

• DOI för Targeting hepatocyte growth factor in epithelial-stromal interactions in an in vitro experimental model of human periodontitis
• Ladda ner fulltext (pdf) av Targeting hepatocyte growth factor in epithelial-stromal interactions in an in vitro experimental model of human periodontitis

An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation

Sabatier, Pierre; Beusch, Christian M.; Saei, Amir A.; Aoun, Mike et al.

Ingår i Nature Communications, 2021

• DOI för An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation
• Ladda ner fulltext (pdf) av An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation

Stromal FAP is an independent poor prognosis marker in non-small cell lung adenocarcinoma and associated with p53 mutation

Moreno-Ruiz, Pablo; Corvigno, Sara; te Grootenhuis, Nienke C.; La Fleur, Linnéa et al.

Ingår i Lung Cancer, s. 10-19, 2021

• DOI för Stromal FAP is an independent poor prognosis marker in non-small cell lung adenocarcinoma and associated with p53 mutation
• Ladda ner fulltext (pdf) av Stromal FAP is an independent poor prognosis marker in non-small cell lung adenocarcinoma and associated with p53 mutation

FGFR1 overexpression in non-small cell lung cancer is mediated by genetic and epigenetic mechanisms and is a determinant of FGFR1 inhibitor response

Bogatyrova, Olga; Mattsson, Johanna S M; Ross, Edith M.; Sanderson, Michael P. et al.

Ingår i European Journal of Cancer, s. 136-149, 2021

• DOI för FGFR1 overexpression in non-small cell lung cancer is mediated by genetic and epigenetic mechanisms and is a determinant of FGFR1 inhibitor response
• Ladda ner fulltext (pdf) av FGFR1 overexpression in non-small cell lung cancer is mediated by genetic and epigenetic mechanisms and is a determinant of FGFR1 inhibitor response

The Immune Landscape of Colorectal Cancer

Mezheyeuski, Artur; Micke, Patrick; Martin-Bernabe, Alfonso; Backman, Max et al.

Ingår i Cancers, 2021

• DOI för The Immune Landscape of Colorectal Cancer
• Ladda ner fulltext (pdf) av The Immune Landscape of Colorectal Cancer

High Density of NRF2 Expression in Malignant Cells Is Associated with Increased Risk of CNS Metastasis in Early-Stage NSCLC

Tsakonas, Georgios; Martin-Bernabe, Alfonso; Rounis, Konstantinos; Moreno-Ruiz, Pablo et al.

Ingår i Cancers, 2021

• DOI för High Density of NRF2 Expression in Malignant Cells Is Associated with Increased Risk of CNS Metastasis in Early-Stage NSCLC
• Ladda ner fulltext (pdf) av High Density of NRF2 Expression in Malignant Cells Is Associated with Increased Risk of CNS Metastasis in Early-Stage NSCLC

TGF-beta-mediated epithelial-mesenchymal transition and tumor-promoting effects in CMT64 cells are reflected in the transcriptomic signature of human lung adenocarcinoma

Miyashita, Naoya; Enokido, Takayoshi; Horie, Masafumi; Fukuda, Kensuke et al.

Ingår i Scientific Reports, 2021

• DOI för TGF-beta-mediated epithelial-mesenchymal transition and tumor-promoting effects in CMT64 cells are reflected in the transcriptomic signature of human lung adenocarcinoma
• Ladda ner fulltext (pdf) av TGF-beta-mediated epithelial-mesenchymal transition and tumor-promoting effects in CMT64 cells are reflected in the transcriptomic signature of human lung adenocarcinoma

Targeting MARCO and IL-37R on immunosuppressive macrophages in lung cancer blocks regulatory T cells and supports cytotoxic lymphocyte function

La Fleur, Linnea; Botling, Johan; He, Fei; Pelicano, Catarina et al.

Ingår i Cancer Research, s. 956-967, 2021

• DOI för Targeting MARCO and IL-37R on immunosuppressive macrophages in lung cancer blocks regulatory T cells and supports cytotoxic lymphocyte function

Programmed Cell Death Ligand 1 Expression in Resected Non-Small Cell Lung Cancer

Yu, Hui; Brustugun, Odd Terje; Ekman, Simon; Botling, Johan et al.

Ingår i Clinical Lung Cancer, s. 555-562, 2021

• DOI för Programmed Cell Death Ligand 1 Expression in Resected Non-Small Cell Lung Cancer

The protein expression profile of ACE2 in human tissues

Noraddin, Feria Hikmet; Méar, Loren; Edvinsson, Åsa; Micke, Patrick et al.

Ingår i Molecular Systems Biology, 2020

• DOI för The protein expression profile of ACE2 in human tissues

Comprehensive analysis of RNA binding motif protein 3 (RBM3) in non-small cell lung cancer

Salomonsson, Annette; Micke, Patrick; Mattsson, Johanna S M; La Fleur, Linnéa et al.

Ingår i Cancer Medicine, s. 5609-5619, 2020

• DOI för Comprehensive analysis of RNA binding motif protein 3 (RBM3) in non-small cell lung cancer
• Ladda ner fulltext (pdf) av Comprehensive analysis of RNA binding motif protein 3 (RBM3) in non-small cell lung cancer

Topographical Distribution and Spatial Interactions of Innate and Semi-Innate Immune Cells in Pancreatic and Other Periampullary Adenocarcinoma

Lundgren, Sebastian; Micke, Patrick; Elebro, Jacob; Heby, Margareta et al.

Ingår i Frontiers in Immunology, 2020

• DOI för Topographical Distribution and Spatial Interactions of Innate and Semi-Innate Immune Cells in Pancreatic and Other Periampullary Adenocarcinoma
• Ladda ner fulltext (pdf) av Topographical Distribution and Spatial Interactions of Innate and Semi-Innate Immune Cells in Pancreatic and Other Periampullary Adenocarcinoma

The Novel Anti-cMet Antibody seeMet 12 Potentiates Sorafenib Therapy and Radiotherapy in a Colorectal Cancer Model

Spiegelberg, Diana; Lundgren Mortensen, Anja Charlotte; Palupi, Kartika Dyah; Micke, Patrick et al.

Ingår i Frontiers in Oncology, 2020

• DOI för The Novel Anti-cMet Antibody seeMet 12 Potentiates Sorafenib Therapy and Radiotherapy in a Colorectal Cancer Model
• Ladda ner fulltext (pdf) av The Novel Anti-cMet Antibody seeMet 12 Potentiates Sorafenib Therapy and Radiotherapy in a Colorectal Cancer Model

PD-L1 expression in gastroenteropancreatic neuroendocrine neoplasms grade 3

Ali, Abir Salwa; Langer, Seppo W.; Federspiel, Birgitte; Hjortland, Geir Olav et al.

Ingår i PLOS ONE, 2020

• DOI för PD-L1 expression in gastroenteropancreatic neuroendocrine neoplasms grade 3
• Ladda ner fulltext (pdf) av PD-L1 expression in gastroenteropancreatic neuroendocrine neoplasms grade 3

An immune gene expression signature distinguishes central nervous system metastases from primary tumours in non-small-cell lung cancer

Tsakonas, Georgios; Lewensohn, Rolf; Botling, Johan; Ortiz-Villalon, Cristian et al.

Ingår i European Journal of Cancer, s. 24-34, 2020

• DOI för An immune gene expression signature distinguishes central nervous system metastases from primary tumours in non-small-cell lung cancer
• Ladda ner fulltext (pdf) av An immune gene expression signature distinguishes central nervous system metastases from primary tumours in non-small-cell lung cancer

ASCL1 promotes tumor progression through cell-autonomous signaling and immune modulation in a subset of lung adenocarcinoma

Miyashita, Naoya; Horie, Masafumi; Mikami, Yu; Urushiyama, Hirokazu et al.

Ingår i Cancer Letters, s. 121-132, 2020

• DOI för ASCL1 promotes tumor progression through cell-autonomous signaling and immune modulation in a subset of lung adenocarcinoma

Platelet-derived growth factor receptor β activation and regulation in murine myelofibrosis

Kramer, Frederike; Dernedde, Jens; Mezheyeuski, Artur; Tauber, Rudolf et al.

Ingår i Haematologica, s. 2083-2094, 2020

• DOI för Platelet-derived growth factor receptor β activation and regulation in murine myelofibrosis
• Ladda ner fulltext (pdf) av Platelet-derived growth factor receptor β activation and regulation in murine myelofibrosis

Quantitative, qualitative and spatial analysis of lymphocyte infiltration in periampullary and pancreatic adenocarcinoma

Lundgren, Sebastian; Elebro, Jacob; Heby, Margareta; Nodin, Björn et al.

Ingår i International Journal of Cancer, s. 3461-3473, 2020

• DOI för Quantitative, qualitative and spatial analysis of lymphocyte infiltration in periampullary and pancreatic adenocarcinoma
• Ladda ner fulltext (pdf) av Quantitative, qualitative and spatial analysis of lymphocyte infiltration in periampullary and pancreatic adenocarcinoma

Multiplex plasma protein profiling identifies novel markers to discriminate patients with adenocarcinoma of the lung

Djureinovic, Dijana; Pontén, Victor; Landelius, Per; Al Sayegh, Sahar et al.

Ingår i BMC Cancer, 2019

• DOI för Multiplex plasma protein profiling identifies novel markers to discriminate patients with adenocarcinoma of the lung
• Ladda ner fulltext (pdf) av Multiplex plasma protein profiling identifies novel markers to discriminate patients with adenocarcinoma of the lung

Programmed Cell Death Ligand 1 Immunohistochemistry: A Concordance Study Between Surgical Specimen, Biopsy, and Tissue Microarray

Elfving, Hedvig; Mattsson, Johanna Sofia Margareta; Lindskog, Cecilia; Backman, Max et al.

Ingår i Clinical Lung Cancer, s. 258-2620, 2019

• DOI för Programmed Cell Death Ligand 1 Immunohistochemistry: A Concordance Study Between Surgical Specimen, Biopsy, and Tissue Microarray

A combined gene expression tool for parallel histological prediction and gene fusion detection in non-small cell lung cancer

Karlsson, Anna; Cirenajwis, Helena; Ericson-Lindquist, Kajsa; Brunnström, Hans et al.

Ingår i Scientific Reports, 2019

• DOI för A combined gene expression tool for parallel histological prediction and gene fusion detection in non-small cell lung cancer
• Ladda ner fulltext (pdf) av A combined gene expression tool for parallel histological prediction and gene fusion detection in non-small cell lung cancer

Mucin staining is of limited value in addition to basic immunohistochemical analyses in the diagnostics of non-small cell lung cancer

Micke, Patrick; Botling, Johan; Mattsson, Johanna Sofia Margareta; Planck, Maria et al.

Ingår i Scientific Reports, 2019

• DOI för Mucin staining is of limited value in addition to basic immunohistochemical analyses in the diagnostics of non-small cell lung cancer
• Ladda ner fulltext (pdf) av Mucin staining is of limited value in addition to basic immunohistochemical analyses in the diagnostics of non-small cell lung cancer

A clonal expression biomarker associates with lung cancer mortality

Biswas, Dhruva; Birkbak, Nicolai J.; Rosenthal, Rachel; Hiley, Crispin T. et al.

Ingår i Nature Medicine, s. 1540-1548, 2019

• DOI för A clonal expression biomarker associates with lung cancer mortality

c-MET as a biomarker in patients with surgically resected non-small cell lung cancer

Tsakonas, Georgios; Botling, Johan; Micke, Patrick; Rivard, Chris et al.

Ingår i Lung Cancer, s. 69-74, 2019

• DOI för c-MET as a biomarker in patients with surgically resected non-small cell lung cancer

Immunohistochemical profiles in primary lung cancers and epithelial pulmonary metastases

Vidarsdottir, Halla; Tran, Lena; Nodin, Björn; Jirström, Karin et al.

Ingår i Human Pathology, s. 221-230, 2019

• DOI för Immunohistochemical profiles in primary lung cancers and epithelial pulmonary metastases

LIPG-promoted lipid storage mediates adaptation to oxidative stress in breast cancer

Cadenas, Cristina; Vosbeck, Sonja; Edlund, Karolina; Grgas, Katharina et al.

Ingår i International Journal of Cancer, s. 901-915, 2019

• DOI för LIPG-promoted lipid storage mediates adaptation to oxidative stress in breast cancer
• Ladda ner fulltext (pdf) av LIPG-promoted lipid storage mediates adaptation to oxidative stress in breast cancer

Prognostic Impact of Tumor Cell Programmed Death Ligand 1 Expression and Immune Cell Infiltration in NSCLC

Edlund, Karolina; Madjar, Katrin; Mattsson, Johanna Sofia Margareta; Djureinovic, Dijana et al.

Ingår i Journal of Thoracic Oncology, s. 628-640, 2019

• DOI för Prognostic Impact of Tumor Cell Programmed Death Ligand 1 Expression and Immune Cell Infiltration in NSCLC
• Ladda ner fulltext (pdf) av Prognostic Impact of Tumor Cell Programmed Death Ligand 1 Expression and Immune Cell Infiltration in NSCLC

Real-world prevalence of programmed death ligand 1 expression in locally advanced or metastatic non small-cell lung cancer: The global, multicenter EXPRESS study

Dietel, M.; Savelov, N.; Salanova, R.; Micke, Patrick et al.

Ingår i Lung Cancer, s. 174-179, 2019

• DOI för Real-world prevalence of programmed death ligand 1 expression in locally advanced or metastatic non small-cell lung cancer: The global, multicenter EXPRESS study

NK- and T-cell subsets in malignant mesothelioma patients: Baseline pattern and changes in the context of anti-CTLA-4 therapy

Sottile, Rosa; Tannazi, Milad; Johansson, Maria H.; Cristiani, Costanza Maria et al.

Ingår i International Journal of Cancer, s. 2238-2248, 2019

• DOI för NK- and T-cell subsets in malignant mesothelioma patients: Baseline pattern and changes in the context of anti-CTLA-4 therapy

Mutation patterns in a population-based non-small cell lung cancer cohort and prognostic impact of concomitant mutations in KRAS and TP53 or STK11

La Fleur, Linnea; Falk-Sörqvist, Elin; Smeds, Patrik; Berglund, Anders et al.

Ingår i Lung Cancer, s. 50-58, 2019

• DOI för Mutation patterns in a population-based non-small cell lung cancer cohort and prognostic impact of concomitant mutations in KRAS and TP53 or STK11
• Ladda ner fulltext (pdf) av Mutation patterns in a population-based non-small cell lung cancer cohort and prognostic impact of concomitant mutations in KRAS and TP53 or STK11

Cancer stemness, intratumoral heterogeneity, and immune response across cancers

Miranda, Alex; Hamilton, Phineas T.; Zhang, Allen W.; Pattnaik, Swetansu et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 9020-9029, 2019

• DOI för Cancer stemness, intratumoral heterogeneity, and immune response across cancers

Multispectral imaging for quantitative and compartment-specific immune infiltrates reveals distinct immune profiles that classify lung cancer patients

Mezheyeuski, Artur; Bergsland, Christian Holst; Backman, Max; Djureinovic, Dijana et al.

Ingår i Journal of Pathology, s. 421-431, 2018

• DOI för Multispectral imaging for quantitative and compartment-specific immune infiltrates reveals distinct immune profiles that classify lung cancer patients

Expression of scavenger receptor MARCO defines a targetable tumor-associated macrophage subset in non-small cell lung cancer

La Fleur, Linnea; Boura, Vanessa F.; Alexeyenko, Andrey; Berglund, Anders et al.

Ingår i International Journal of Cancer, s. 1741-1752, 2018

• DOI för Expression of scavenger receptor MARCO defines a targetable tumor-associated macrophage subset in non-small cell lung cancer

The Heidelberg compact electron beam ion traps

Micke, Patrick; Kühn, S; Buchauer, L; Harries, J R et al.

Ingår i Review of Scientific Instruments, 2018

• DOI för The Heidelberg compact electron beam ion traps

COX-2 expression and effects of celecoxib in addition to standard chemotherapy in advanced non-small cell lung cancer.

Gulyas, Miklos; Mattsson, Johanna Sofia Margareta; Lindgren, Andrea; Ek, Lars et al.

Ingår i Acta Oncologica, s. 244-250, 2018

• DOI för COX-2 expression and effects of celecoxib in addition to standard chemotherapy in advanced non-small cell lung cancer.

Comparison of Three Different TTF-1 Clones in Resected Primary Lung Cancer and Epithelial Pulmonary Metastase

Vidarsdottir, Halla; Tran, Lena; Nodin, Björn; Jirström, Karin et al.

Ingår i American Journal of Clinical Pathology, s. 533-544, 2018

• DOI för Comparison of Three Different TTF-1 Clones in Resected Primary Lung Cancer and Epithelial Pulmonary Metastase

LMO7 and LIMCH1 interact with LRIG proteins in lung cancer, with prognostic implications for early-stage disease

Karlsson, Terese; Kvarnbrink, Samuel; Holmlund, Camilla; Botling, Johan et al.

Ingår i Lung Cancer, s. 174-184, 2018

• DOI för LMO7 and LIMCH1 interact with LRIG proteins in lung cancer, with prognostic implications for early-stage disease

An Integrative Analysis of Transcriptome and Epigenome Features of ASCL1-Positive Lung Adenocarcinomas

Miyashita, Naoya; Horie, Masafumi; Suzuki, Hiroshi I.; Yoshihara, Masahito et al.

Ingår i Journal of Thoracic Oncology, s. 1676-1691, 2018

• DOI för An Integrative Analysis of Transcriptome and Epigenome Features of ASCL1-Positive Lung Adenocarcinomas

An integrative transcriptome analysis reveals a functional role for thyroid transcription factor-1 in small cell lung cancer

Horie, Masafumi; Miyashita, Naoya; Mattsson, Johanna Sofia Margareta; Mikami, Yu et al.

Ingår i Journal of Pathology, s. 154-165, 2018

• DOI för An integrative transcriptome analysis reveals a functional role for thyroid transcription factor-1 in small cell lung cancer

Radionuclide Therapy of HER2-Expressing Human Xenografts Using Affibody-Based Peptide Nucleic Acid-Mediated Pretargeting: In Vivo Proof of Principle

Westerlund, Kristina; Altai, Mohamed; Mitran, Bogdan; Konijnenberg, Mark et al.

Ingår i Journal of Nuclear Medicine, s. 1092-1098, 2018

• DOI för Radionuclide Therapy of HER2-Expressing Human Xenografts Using Affibody-Based Peptide Nucleic Acid-Mediated Pretargeting: In Vivo Proof of Principle

Detection of autoantibodies against cancer-testis antigens in non-small cell lung cancer

Djureinovic, Dijana; Dodig-Crnkovic, Tea; Hellström, Cecilia; Holgersson, Georg et al.

Ingår i Lung Cancer, s. 157-163, 2018

• DOI för Detection of autoantibodies against cancer-testis antigens in non-small cell lung cancer

Digital multiplex immunofluorescence analysis identifies immune profiles in the tumor stroma associated with clinical outcome

Mezheyeuski, Artur; Bergsland, Christian; Backman, Max; Sjöblom, Tobias et al.

Ingår i CANCER IMMUNOLOGY RESEARCH, 2018

• DOI för Digital multiplex immunofluorescence analysis identifies immune profiles in the tumor stroma associated with clinical outcome

30O Real-world prevalence of PD-L1 expression in locally advanced or metastatic non-small cell lung cancer (NSCLC): The global, multicentre EXPRESS study

Dietel, M.; Savelov, N.; Salanova, R.; Micke, Patrick et al.

Ingår i Journal of Thoracic Oncology, 2018

• DOI för 30O Real-world prevalence of PD-L1 expression in locally advanced or metastatic non-small cell lung cancer (NSCLC): The global, multicentre EXPRESS study

Digital pathology 2.0: a deep learning image analysis tool to identify lung cancer in human tissue samples

Micke, Patrick; Björk, L.; Backman, M.; Elfving, H. et al.

Ingår i Virchows Archiv, 2018

Real-World Prevalence of PD-L1 Expression in Advanced NoneSmall-Cell Lung Cancer: The Global, Multicenter EXPRESS Study

Salanova, R.; Dietel, M.; Savelov, N.; Micke, Patrick et al.

Ingår i Journal of Thoracic Oncology, 2018

Reaching the limits of prognostication in non-small cell lung cancer: an optimized biomarker panel fails to outperform clinical parameters.

Grinberg, Marianna; Djureinovic, Dijana; Brunnström, Hans R R; Mattsson, Johanna Sofia Margareta et al.

Ingår i Modern Pathology, s. 964-977, 2017

• DOI för Reaching the limits of prognostication in non-small cell lung cancer: an optimized biomarker panel fails to outperform clinical parameters.

The integrative clinical impact of tumor-infiltrating T lymphocytes and NK cells in relation to B lymphocyte and plasma cell density in esophageal and gastric adenocarcinoma

Svensson, Maria C.; Warfvinge, Carl Fredrik; Fristedt, Richard; Hedner, Charlotta et al.

Ingår i Oncotarget, s. 72108-72126, 2017

• DOI för The integrative clinical impact of tumor-infiltrating T lymphocytes and NK cells in relation to B lymphocyte and plasma cell density in esophageal and gastric adenocarcinoma
• Ladda ner fulltext (pdf) av The integrative clinical impact of tumor-infiltrating T lymphocytes and NK cells in relation to B lymphocyte and plasma cell density in esophageal and gastric adenocarcinoma

Integrative analysis of genome-wide gene copy number changes and gene expression in non-small cell lung cancer

Jabs, Verena; Edlund, Karolina; Koenig, Helena; Grinberg, Marianna et al.

Ingår i PLOS ONE, 2017

• DOI för Integrative analysis of genome-wide gene copy number changes and gene expression in non-small cell lung cancer
• Ladda ner fulltext (pdf) av Integrative analysis of genome-wide gene copy number changes and gene expression in non-small cell lung cancer

Whole-tissue biopsy phenotyping of three-dimensional tumours reveals patterns of cancer heterogeneity

Tanaka, Nobuyuki; Kanatani, Shigeaki; Tomer, Raju; Sahlgren, Cecilia et al.

Ingår i Nature Biomedical Engineering, s. 796-806, 2017

• DOI för Whole-tissue biopsy phenotyping of three-dimensional tumours reveals patterns of cancer heterogeneity

PD-L1 immunohistochemistry in clinical diagnostics of lung cancer: inter-pathologist variability is higher than assay variability

Brunnstrom, Hans; Johansson, Anna; Westbom-Fremer, Sofia; Backman, Max et al.

Ingår i Modern Pathology, s. 1411-1421, 2017

• DOI för PD-L1 immunohistochemistry in clinical diagnostics of lung cancer: inter-pathologist variability is higher than assay variability

Somatic Ephrin Receptor Mutations Are Associated with Metastasis in Primary Colorectal Cancer

Mathot, Lucy; Kundu, Snehangshu; Ljungström, Viktor; Svedlund, Jessica et al.

Ingår i Cancer Research, s. 1730-1740, 2017

• DOI för Somatic Ephrin Receptor Mutations Are Associated with Metastasis in Primary Colorectal Cancer

RANK rewires energy homeostasis in lung cancer cells and drives primary lung cancer

Rao, Shuan; Sigl, Verena; Wimmer, Reiner Alois; Novatchkova, Maria et al.

Ingår i Genes & Development, s. 2099-2112, 2017

• DOI för RANK rewires energy homeostasis in lung cancer cells and drives primary lung cancer
• Ladda ner fulltext (pdf) av RANK rewires energy homeostasis in lung cancer cells and drives primary lung cancer

A pathology atlas of the human cancer transcriptome

Uhlen, Mathias; Zhang, Cheng; Lee, Sunjae; Sjöstedt, Evelina et al.

Ingår i Science, 2017

• DOI för A pathology atlas of the human cancer transcriptome

Gene Expression Profiling of Large Cell Lung Cancer Links Transcriptional Phenotypes to the New Histological WHO 2015 Classification

Karlsson, Anna; Brunnström, Hans; Micke, Patrick; Veerla, Srinivas et al.

Ingår i Journal of Thoracic Oncology, s. 1257-1267, 2017

• DOI för Gene Expression Profiling of Large Cell Lung Cancer Links Transcriptional Phenotypes to the New Histological WHO 2015 Classification
• Ladda ner fulltext (pdf) av Gene Expression Profiling of Large Cell Lung Cancer Links Transcriptional Phenotypes to the New Histological WHO 2015 Classification

Mutation Profiling by Targeted Next Generation Sequencing of an Unselected NSCLC Cohort

La Fleur, Linnea; Falk-Sörqvist, Elin; Smeds, Patrik; Sundström, Magnus et al.

Ingår i Journal of Thoracic Oncology, 2017

• DOI för Mutation Profiling by Targeted Next Generation Sequencing of an Unselected NSCLC Cohort

Establishing Reflex NGS Testing in NSCLC in a Regional Network of County Hospitals in Central Sweden

Isaksson, Johan; Willen, Linda; La Fleur, Linnea; Mindus, Stephanie et al.

Ingår i Journal of Thoracic Oncology, 2017

• DOI för Establishing Reflex NGS Testing in NSCLC in a Regional Network of County Hospitals in Central Sweden

PD-L1 immunohistochemistry in clinical diagnostics: Inter-pathologist variability is as high as assay variability

Micke, Patrick; Johansson, Anna; Westbom-Fremer, Anna; Backman, Max et al.

Ingår i Journal of Clinical Oncology, 2017

• DOI för PD-L1 immunohistochemistry in clinical diagnostics: Inter-pathologist variability is as high as assay variability

Integrative CAGE and DNA Methylation Profiling Identify Epigenetically Regulated Genes in NSCLC

Horie, Masafumi; Kaczkowski, Bogumil; Ohshima, Mitsuhiro; Matsuzaki, Hirotaka et al.

Ingår i Molecular Cancer Research, s. 1354-1365, 2017

• DOI för Integrative CAGE and DNA Methylation Profiling Identify Epigenetically Regulated Genes in NSCLC

Antitumoral effect and reduced systemic toxicity in mice after intra-tumoral injection of an in vivo solidifying calcium sulfate formulation with docetaxel

Sandelin, Martin; Gruden, S.; Räsänen, Veera; Micke, Patrick et al.

Ingår i Annals of Oncology, 2017

• DOI för Antitumoral effect and reduced systemic toxicity in mice after intra-tumoral injection of an in vivo solidifying calcium sulfate formulation with docetaxel

The clinical impact of tumour-infiltrating lymphocytes in colorectal cancer differs by anatomical subsite: A cohort study

Berntsson, Jonna; Svensson, Maria C.; Leandersson, Karin; Nodin, Bjorn et al.

Ingår i International Journal of Cancer, s. 1654-1666, 2017

• DOI för The clinical impact of tumour-infiltrating lymphocytes in colorectal cancer differs by anatomical subsite: A cohort study
• Ladda ner fulltext (pdf) av The clinical impact of tumour-infiltrating lymphocytes in colorectal cancer differs by anatomical subsite: A cohort study

Antitumoral effect and reduced systemic toxicity in mice after intra-tumoral injection of an in vivo solidifying calcium sulfate formulation with docetaxel

Grudén, Stefan; Sandelin, Martin; Rasanen, Veera; Micke, Patrick et al.

Ingår i European journal of pharmaceutics and biopharmaceutics, s. 186-193, 2017

• DOI för Antitumoral effect and reduced systemic toxicity in mice after intra-tumoral injection of an in vivo solidifying calcium sulfate formulation with docetaxel
• Ladda ner fulltext (pdf) av Antitumoral effect and reduced systemic toxicity in mice after intra-tumoral injection of an in vivo solidifying calcium sulfate formulation with docetaxel

Prognostic impact of tumour-associated B cells and plasma cells in epithelial ovarian cancer

Lundgren, Sebastian; Berntsson, Jonna; Nodin, Björn; Micke, Patrick et al.

Ingår i Journal of Ovarian Research, 2016

• DOI för Prognostic impact of tumour-associated B cells and plasma cells in epithelial ovarian cancer
• Ladda ner fulltext (pdf) av Prognostic impact of tumour-associated B cells and plasma cells in epithelial ovarian cancer

Transcriptome analysis of periodontitis-associated fibroblasts by CAGE sequencing identified DLX5 and RUNX2 long variant as novel regulators involved in periodontitis

Horie, Masafumi; Yamaguchi, Yoko; Saito, Akira; Nagase, Takahide et al.

Ingår i Scientific Reports, 2016

• DOI för Transcriptome analysis of periodontitis-associated fibroblasts by CAGE sequencing identified DLX5 and RUNX2 long variant as novel regulators involved in periodontitis
• Ladda ner fulltext (pdf) av Transcriptome analysis of periodontitis-associated fibroblasts by CAGE sequencing identified DLX5 and RUNX2 long variant as novel regulators involved in periodontitis

Inconsistent results in the analysis of ALK rearrangements in non-small cell lung cancer

Mattsson, Johanna Sofia Margareta; Brunnström, Hans; Jabs, Verena; Edlund, Karolina et al.

Ingår i BMC Cancer, 2016

• DOI för Inconsistent results in the analysis of ALK rearrangements in non-small cell lung cancer
• Ladda ner fulltext (pdf) av Inconsistent results in the analysis of ALK rearrangements in non-small cell lung cancer

The protein kinase LKB1 negatively regulates bone morphogenetic protein receptor signaling

Raja, Erna; Tzavlaki, Kalliopi; Vuilleumier, Robin; Edlund, Karolina et al.

Ingår i Oncotarget, s. 1120-1143, 2016

• DOI för The protein kinase LKB1 negatively regulates bone morphogenetic protein receptor signaling
• Ladda ner fulltext (pdf) av The protein kinase LKB1 negatively regulates bone morphogenetic protein receptor signaling

Epsin Family Member 3 and Ribosome-Related Genes Are Associated with Late Metastasis in Estrogen Receptor-Positive Breast Cancer and Long-Term Survival in Non-Small Cell Lung Cancer Using a Genome-Wide Identification and Validation Strategy

Hellwig, Birte; Madjar, Katrin; Edlund, Karolina; Marchan, Rosemarie et al.

Ingår i PLOS ONE, 2016

• DOI för Epsin Family Member 3 and Ribosome-Related Genes Are Associated with Late Metastasis in Estrogen Receptor-Positive Breast Cancer and Long-Term Survival in Non-Small Cell Lung Cancer Using a Genome-Wide Identification and Validation Strategy
• Ladda ner fulltext (pdf) av Epsin Family Member 3 and Ribosome-Related Genes Are Associated with Late Metastasis in Estrogen Receptor-Positive Breast Cancer and Long-Term Survival in Non-Small Cell Lung Cancer Using a Genome-Wide Identification and Validation Strategy

Various Antibody Clones of Napsin A, Thyroid Transcription Factor 1, and p40 and Comparisons With Cytokeratin 5 and p63 in Histopathologic Diagnostics of Non-Small Cell Lung Carcinoma

Tran, Lena; Mattsson, Johanna Sofia Margareta; Nodin, Björn; Jönsson, Per et al.

Ingår i Applied immunohistochemistry & molecular morphology (Print), s. 648-659, 2016

• DOI för Various Antibody Clones of Napsin A, Thyroid Transcription Factor 1, and p40 and Comparisons With Cytokeratin 5 and p63 in Histopathologic Diagnostics of Non-Small Cell Lung Carcinoma

Profiling cancer testis antigens in non-small-cell lung cancer

Djureinovic, Dijana; Hallström, Bjorn M.; Horie, Masafumi; Mattsson, Johanna Sofia Margareta et al.

Ingår i JCI INSIGHT, 2016

• DOI för Profiling cancer testis antigens in non-small-cell lung cancer

Prognostic impact of tumour-associated B cells and plasma cells in oesophageal and gastric adenocarcinoma

Fristedt, Richard; Borg, David; Hedner, Charlotta; Berntsson, Jonna et al.

Ingår i Journal of Gastrointestinal Oncology, s. 848-859, 2016

• DOI för Prognostic impact of tumour-associated B cells and plasma cells in oesophageal and gastric adenocarcinoma

The Impact of the Fourth Edition of the WHO Classification of Lung Tumours on Histological Classification of Resected Pulmonary NSCCs

Micke, Patrick; Mattsson, Johanna Sofia Margareta; Djureinovic, Dijana; Nodin, Björn et al.

Ingår i Journal of Thoracic Oncology, s. 862-872, 2016

• DOI för The Impact of the Fourth Edition of the WHO Classification of Lung Tumours on Histological Classification of Resected Pulmonary NSCCs

Prognostic impact of tumour-infiltrating B cells and plasma cells in colorectal cancer

Berntsson, Jonna; Nodin, Björn; Eberhard, Jakob; Micke, Patrick et al.

Ingår i International Journal of Cancer, s. 1129-1139, 2016

• DOI för Prognostic impact of tumour-infiltrating B cells and plasma cells in colorectal cancer

Prognostic impact of tumor-associated B-cells and plasma cells in esophageal and gastric adenocarcinoma

Fristedt, Richard; Hedner, Charlotta; Borg, David; Nodin, Björn et al.

Ingår i Journal of Clinical Oncology, 2016

Fibroblast VEGF-receptor 1 expression as molecular target in periodontitis

Ohshima, Mitsuhiro; Yamaguchi, Yoko; Ambe, Kimiharu; Horie, Masafumi et al.

Ingår i Journal of Clinical Periodontology, s. 128-137, 2016

• DOI för Fibroblast VEGF-receptor 1 expression as molecular target in periodontitis

Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer

Birgisson, Helgi; Edlund, Karolina; Wallin, Ulrik; Påhlman, Lars et al.

Ingår i BMC Cancer, 2015

• DOI för Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer
• Ladda ner fulltext (pdf) av Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer

The Identification of Therapeutic Targets in Lung Cancer Based on Transcriptomic and Proteomic Characterization of Cancer-Testis Antigens

Djureinovic, Dijana; Hallström, Björn; Mattsson, Johanna Sofia Margareta; La Fleur, Linnea et al.

Ingår i Journal of Thoracic Oncology, 2015

LRIG1 is a prognostic biomarker in non-small cell lung cancer

Kvarnbrink, Samuel; Karlsson, Terese; Edlund, Karolina; Botling, Johan et al.

Ingår i Acta Oncologica, s. 1113-1119, 2015

• DOI för LRIG1 is a prognostic biomarker in non-small cell lung cancer

Prognostic impact of COX-2 in non-small cell lung cancer: A comprehensive compartment-specific evaluation of tumor and stromal cell expression

Mattsson, Johanna Sofia Margareta; Bergman, Bengt; Grinberg, Marianna; Edlund, Karolina et al.

Ingår i Cancer Letters, s. 837-845, 2015

• DOI för Prognostic impact of COX-2 in non-small cell lung cancer: A comprehensive compartment-specific evaluation of tumor and stromal cell expression

Mutation Profiling by Targeted Next-Generation Sequencing for Diagnostics and Patient Cohort Screening in FFPE NSCLC Samples

La Fleur, Linnea; Moens, Lotte; Falk-Sörqvist, Elin; Sundström, Magnus et al.

Ingår i Journal of Thoracic Oncology, 2015

The role of the p53 target Wig-1 in senescence and cancer

Jerhammar, Fredrik; Bersani, Cinzia; Djureinovic, Dijana; Micke, Patrick et al.

Ingår i Cancer Research, s. 110, 2015

• DOI för The role of the p53 target Wig-1 in senescence and cancer

The Crux of Molecular Prognostications in NSCLC: An Optimized Biomarker Panel Fails to Outperform Clinical Parameters

Djureinovic, Dijana; Grinberg, Marianna; Mattsson, Johanna Sofia Margareta; Edlund, Karolina et al.

Ingår i Journal of Thoracic Oncology, 2015

ALK Rearrangements in Non-Small Cell Lung Cancer: Comprehensive Integration of Genomic, Gene Expression and Protein Analysis

Mattsson, Johanna S. M.; Svensson, Maria A.; Hallström, Björn; Koyi, Hirsh et al.

Ingår i Journal of Thoracic Oncology, 2015

COX-2 Expression Does Not Predict Outcome of Celecoxib in Addition to Standard Chemotherapy in Advanced Non-Small Cell Lung Cancer

Gulyas, Miklos; Mattsson, Johanna S. M.; Lindgren, Andrea; Sederholm, Christer et al.

Ingår i Journal of Thoracic Oncology, 2015

Clinical Validation of HaloPlex Targeted Resequencing in Formalin-Fixed, Paraffin-Embedded (FFPE) Cancer Biopsies

Moens, Lotte. N.; Falk-Sörqvist, Elin; La Fleur, Linnea; Mattsson, Johanna et al.

Ingår i Journal of Molecular Diagnostics, s. 822-822, 2015

HaloPlex Targeted Resequencing for Mutation Detection in Clinical Formalin-Fixed, Paraffin-Embedded Tumor Samples

Moens, Lotte N. J.; Falk-Sörqvist, Elin; Ljungström, Viktor; Mattsson, Johanna et al.

Ingår i Journal of Molecular Diagnostics, s. 729-739, 2015

• DOI för HaloPlex Targeted Resequencing for Mutation Detection in Clinical Formalin-Fixed, Paraffin-Embedded Tumor Samples

Identification of sample annotation errors in gene expression datasets

Lohr, Miriam; Hellwig, Birte; Edlund, Karolina; Mattsson, Johanna S. M. et al.

Ingår i Archives of Toxicology, s. 2265-2272, 2015

• DOI för Identification of sample annotation errors in gene expression datasets
• Ladda ner fulltext (pdf) av Identification of sample annotation errors in gene expression datasets

Patients with Non-small Cell Lung Cancer Analyzed for EGFR: Adherence to Guidelines, Prevalence and Outcome

Sandelin, Martin; Berglund, Anders; Sundström, Magnus; Micke, Patrick et al.

Ingår i Anticancer Research, s. 3979-3985, 2015

1p36 deletion is a marker for tumour dissemination in microsatellite stable stage II-III colon cancer

Mayrhofer, Markus; Kultima, Hanna Göransson; Birgisson, Helgi; Sundström, Magnus et al.

Ingår i BMC Cancer, s. 872, 2014

• DOI för 1p36 deletion is a marker for tumour dissemination in microsatellite stable stage II-III colon cancer
• Ladda ner fulltext (pdf) av 1p36 deletion is a marker for tumour dissemination in microsatellite stable stage II-III colon cancer

Aberrantly activated claudin 6 and 18.2 as potential therapy targets in non-small-cell lung cancer

Micke, Patrick; Mattsson, Johanna Sofia Margareta; Edlund, Karolina; Lohr, Miriam et al.

Ingår i International Journal of Cancer, s. 2206-2214, 2014

• DOI för Aberrantly activated claudin 6 and 18.2 as potential therapy targets in non-small-cell lung cancer

The lung-specific proteome defined by integration of transcriptomics and antibody-based profiling

Lindskog, Cecilia; Fagerberg, Linn; Hallstrom, Bjorn; Edlund, Karolina et al.

Ingår i The FASEB Journal, s. 5184-5196, 2014

• DOI för The lung-specific proteome defined by integration of transcriptomics and antibody-based profiling

Genomic and Transcriptional Alterations in Lung Adenocarcinoma in Relation to Smoking History

Karlsson, Anna; Ringner, Markus; Lauss, Martin; Botling, Johan et al.

Ingår i Clinical Cancer Research, s. 4912-4924, 2014

• DOI för Genomic and Transcriptional Alterations in Lung Adenocarcinoma in Relation to Smoking History

An Integrative Analysis of the Tumorigenic Role of TAZ in Human Non-Small Cell Lung Cancer

Noguchi, Satoshi; Saito, Akira; Horie, Masafumi; Mikami, Yu et al.

Ingår i Clinical Cancer Research, s. 4660-4672, 2014

• DOI för An Integrative Analysis of the Tumorigenic Role of TAZ in Human Non-Small Cell Lung Cancer

A systematic analysis of commonly used antibodies in cancer diagnostics

Gremel, Gabriela; Bergman, Julia; Djureinovic, Dijana; Edqvist, Per-Henrik et al.

Ingår i Histopathology, s. 293-305, 2014

• DOI för A systematic analysis of commonly used antibodies in cancer diagnostics

In situ mutation detection and visualization of intratumor heterogeneity for cancer research and diagnostics

Grundberg, Ida; Kiflemariam, Sara; Mignardi, Marco; Imgenberg-Kreuz, Juliana et al.

Ingår i Oncotarget, s. 2407-2418, 2013

The prognostic relevance of tumour-infiltrating plasma cells and immunoglobulin kappa C indicates an important role of the humoral immune response in non-small cell lung cancer

Lohr, Miriam; Edlund, Karolina; Botling, Johan; Hammad, Seddik et al.

Ingår i Cancer Letters, s. 222-228, 2013

• DOI för The prognostic relevance of tumour-infiltrating plasma cells and immunoglobulin kappa C indicates an important role of the humoral immune response in non-small cell lung cancer

Biomarker discovery in non-small cell lung cancer: integrating gene expression profiling, meta-analysis and tissue microarray validation

Botling, Johan; Edlund, Karolina; Lohr, Miriam; Hellwig, Birte et al.

Ingår i Clinical Cancer Research, s. 194-204, 2013

• DOI för Biomarker discovery in non-small cell lung cancer: integrating gene expression profiling, meta-analysis and tissue microarray validation

Genomic and Transcriptional Alterations in Lung Adenocarcinoma in Relation to EGFR and KRAS Mutation Status

Planck, Maria; Edlund, Karolina; Botling, Johan; Micke, Patrick et al.

Ingår i PLOS ONE, 2013

• DOI för Genomic and Transcriptional Alterations in Lung Adenocarcinoma in Relation to EGFR and KRAS Mutation Status
• Ladda ner fulltext (pdf) av Genomic and Transcriptional Alterations in Lung Adenocarcinoma in Relation to EGFR and KRAS Mutation Status

Landscape of somatic allelic imbalances and copy number alterations in human lung carcinoma

Staaf, Johan; Isaksson, Sofi; Karlsson, Anna; Jönsson, Mats et al.

Ingår i International Journal of Cancer, s. 2020-2031, 2013

• DOI för Landscape of somatic allelic imbalances and copy number alterations in human lung carcinoma

IGKC and Prognosis in Breast Cancer-Letter

Schmidt, Marcus; Micke, Patrick; Hengstler, Jan G.

Ingår i Clinical Cancer Research, s. 304-304, 2013

• DOI för IGKC and Prognosis in Breast Cancer-Letter

Targeted Resequencing of Formalin-Fixed, Paraffin-Embedded (FFPE) Specimens for Mutation Diagnostics in Solid Tumors

Botling, Johan; Moens, Lotte N.; Sorqvist, Elin Falk; Sundström, Magnus et al.

Ingår i Journal of Molecular Diagnostics, s. 916-916, 2013

Interactions between LRIG proteins and LMO7 and the expression of LMO7 in human lung cancer.

Karlsson, Terese; Kvarnbrink, Samuel; Holmlund, Camilla; Botling, Johan et al.

Ingår i Cancer Research, 2013

• DOI för Interactions between LRIG proteins and LMO7 and the expression of LMO7 in human lung cancer.

In vitro autoradiography of carcinoembryonic antigen in tissue from patients with colorectal cancer using multifunctional antibody TF2 and ^67/68Ga-labeled haptens by pretargeting

Hall, Håkan; Velikyan, Irina; Blom, Elisabeth; Ulin, Johan et al.

Ingår i American journal of nuclear medicine and molecular imaging, s. 141-150, 2012

CD99 is a novel prognostic stromal marker in non-small cell lung cancer

Edlund, Karolina; Lindskog, Cecilia; Saito, Akira; Berglund, Anders et al.

Ingår i International Journal of Cancer, s. 2264-2273, 2012

• DOI för CD99 is a novel prognostic stromal marker in non-small cell lung cancer

Consistent mutation status within histologically heterogeneous lung cancer lesions

Mattsson, Johanna Sofia Margareta; Imgenberg-Kreuz, Juliana; Edlund, Karolina; Botling, Johan et al.

Ingår i Histopathology, s. 744-748, 2012

• DOI för Consistent mutation status within histologically heterogeneous lung cancer lesions

A comprehensive analysis of human gene expression profiles identifies stromal immunoglobulin kappa C as a compatible prognostic marker in human solid tumors

Schmidt, Marcus; Hellwig, Birte; Hammad, Seddik; Othman, Amnah et al.

Ingår i Clinical Cancer Research, s. 2695-2703, 2012

• DOI för A comprehensive analysis of human gene expression profiles identifies stromal immunoglobulin kappa C as a compatible prognostic marker in human solid tumors

Data-driven unbiased curation of the TP53 tumor suppressor gene mutation database and validation by ultradeep sequencing of human tumors

Edlund, Karolina; Larsson, Ola; Ameur, Adam; Bunikis, Ignas et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 9551-9556, 2012

• DOI för Data-driven unbiased curation of the TP53 tumor suppressor gene mutation database and validation by ultradeep sequencing of human tumors

Immunoglobulin kappa chain as an immunologic biomarker of prognosis and chemotherapy response in solid tumors

Schmidt, Marcus; Micke, Patrick; Gehrmann, Mathias; Hengstler, Jan G

Ingår i Oncoimmunology, s. 1156-1158, 2012

• DOI för Immunoglobulin kappa chain as an immunologic biomarker of prognosis and chemotherapy response in solid tumors

Allele-specific copy number analysis of tumor samples with aneuploidy and tumor heterogeneity

Rasmussen, Markus; Sundström, Magnus; Kultima, Hanna Göransson; Botling, Johan et al.

Ingår i Genome Biology, 2011

• DOI för Allele-specific copy number analysis of tumor samples with aneuploidy and tumor heterogeneity
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Gene Copy Number Aberrations Are Associated with Survival in Histologic Subgroups of Non-small Cell Lung Cancer

Micke, Patrick; Edlund, Karolina; Holmberg, Lars; Göransson Kultima, Hanna et al.

Ingår i Journal of Thoracic Oncology, s. 1833-1840, 2011

• DOI för Gene Copy Number Aberrations Are Associated with Survival in Histologic Subgroups of Non-small Cell Lung Cancer

Traditional European Medicine: Hildegard von Bingen and beyond

Micke, O.; Büntzel, J.; Mücke, R.; Micke, Patrick et al.

Ingår i Trace elements and electrolytes, s. 150-155, 2011

• DOI för Traditional European Medicine: Hildegard von Bingen and beyond

Targeted resequencing of candidate genes using Selector Probes

Johansson, Henrik; Isaksson, Magnus; Sörqvist, Elin Falk; Roos, F. et al.

Ingår i Nucleic Acids Research, 2011

• DOI för Targeted resequencing of candidate genes using Selector Probes

Fresh frozen tissue: RNA extraction and quality control

Botling, Johan; Micke, Patrick

Ingår i Methods in Molecular Biology, s. 405-413, 2011

• DOI för Fresh frozen tissue: RNA extraction and quality control

Biobanking of fresh frozen tissue from clinical surgical specimens: transport logistics, sample selection, and histologic characterization.

Botling, Johan; Micke, Patrick

Ingår i Methods in Molecular Biology, s. 299-306, 2011

• DOI för Biobanking of fresh frozen tissue from clinical surgical specimens: transport logistics, sample selection, and histologic characterization.

KRAS analysis in colorectal carcinoma: analytical aspects of Pyrosequencing and allele-specific PCR in clinical practice

Sundström, Magnus; Edlund, Karolina; Lindell, Monica; Glimelius, Bengt et al.

Ingår i BMC Cancer, s. 660, 2010

• DOI för KRAS analysis in colorectal carcinoma: analytical aspects of Pyrosequencing and allele-specific PCR in clinical practice

TGF-beta Signaling in Gingival Fibroblast-Epithelial Interaction

Ohshima, M.; Yamaguchi, Y.; Matsumoto, N.; Micke, Patrick et al.

Ingår i Journal of Dental Research, s. 1315-1321, 2010

• DOI för TGF-beta Signaling in Gingival Fibroblast-Epithelial Interaction

Forkhead box F1 regulates tumor-promoting properties of cancer-associated fibroblasts in lung cancer

Saito, Roy-Akira; Micke, Patrick; Paulsson, Janna; Augsten, Martin et al.

Ingår i Cancer Research, s. 2644-2654, 2010

• DOI för Forkhead box F1 regulates tumor-promoting properties of cancer-associated fibroblasts in lung cancer

Gene Copy Number Aberrations are Associated with Survival in Histological Subgroups of Non Small Cell Lung Cancer

Micke, Patrick; Holmberg, L.; Edlund, Karolina; Lambe, M. et al.

Ingår i Journal of Molecular Diagnostics, s. 909-909, 2010

Complementary and alternative medicine in lung cancer patients: a neglected phenomenon?

Micke, O.; Buntzel, J.; Kisters, K.; Schafer, U. et al.

Ingår i Frontiers of radiation therapy and oncology, s. 198-205, 2010

• DOI för Complementary and alternative medicine in lung cancer patients: a neglected phenomenon?

CXCL14 is an autocrine growth factor for fibroblasts and acts as a multi-modal stimulator of prostate tumor growth

Augsten, Martin; Hägglöf, Christina; Olsson, Eleonor; Stolz, Claudia et al.

Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 3414-3419, 2009

• DOI för CXCL14 is an autocrine growth factor for fibroblasts and acts as a multi-modal stimulator of prostate tumor growth

TA-MUC1 epitope in non-small cell lung cancer

Kuemmel, Andreas; Single, Kristjan; Bittinger, Fernando; Faldum, Andreas et al.

Ingår i Lung Cancer, s. 98-105, 2009

• DOI för TA-MUC1 epitope in non-small cell lung cancer

Regulation of tyrosine phosphatases in the adventitia during vascular remodelling

Micke, Patrick; Hackbusch, Daniel; Mercan, Sibel; Stawowy, Philipp et al.

Ingår i Biochemical and Biophysical Research Communications - BBRC, s. 678-684, 2009

• DOI för Regulation of tyrosine phosphatases in the adventitia during vascular remodelling

bFGF rescues imatinib/STI571-induced apoptosis of sis-NIH3T3 fibroblasts.

Ohshima, Mitsuhiro; Yamaguchi, Yoko; Kappert, Kai; Micke, Patrick et al.

Ingår i Biochemical and Biophysical Research Communications - BBRC, s. 165-170, 2009

• DOI för bFGF rescues imatinib/STI571-induced apoptosis of sis-NIH3T3 fibroblasts.

Quantification of normal cell fraction and copy number neutral LOH in clinical lung cancer samples using SNP array data

Göransson, Hanna; Edlund, Karolina; Rydåker, Maria; Rasmussen, Markus et al.

Ingår i PloS one, 2009

• DOI för Quantification of normal cell fraction and copy number neutral LOH in clinical lung cancer samples using SNP array data

Predictive factors for the use of complementary and alternative medicine (CAM) in radiation oncology

Micke, Oliver; Bruns, Frank; Glatzel, Michael; Schoenekaes, Klaus et al.

Ingår i European Journal of Integrative Medicine, s. 19-25, 2009

• DOI för Predictive factors for the use of complementary and alternative medicine (CAM) in radiation oncology

A novel strategy based on histological protein profiling in-silico for identifying potential biomarkers in urinary bladder cancer

Segersten, M. Ulrika; Edlund, E. Karolina; Micke, Patrick; de la Torre, Manuel et al.

Ingår i BJU International, s. 1780-1785, 2009

• DOI för A novel strategy based on histological protein profiling in-silico for identifying potential biomarkers in urinary bladder cancer

Prognostic significance of stromal platelet-derived growth factor beta-receptor expression in human breast cancer

Paulsson, Janna; Sjöblom, Tobias; Micke, Patrick; Pontén, Fredrik et al.

Ingår i American Journal of Pathology, s. 334-341, 2009

• DOI för Prognostic significance of stromal platelet-derived growth factor beta-receptor expression in human breast cancer

Impact of thawing on RNA integrity and gene expression analysis in fresh frozen tissue

Botling, Johan; Edlund, Karolina; Segersten, Ulrika; Tahmasebpoor, Simin et al.

Ingår i Diagnostic molecular pathology (Print), s. 44-52, 2009

• DOI för Impact of thawing on RNA integrity and gene expression analysis in fresh frozen tissue

In vitro characterization of the cytokine profile of the epithelial cell rests of Malassez

Ohshima, Mitsuhiro; Yamaguchi, Yoko; Micke, Patrick; Abiko, Yoshimitsu et al.

Ingår i Journal of Periodontology, s. 912-919, 2008

• DOI för In vitro characterization of the cytokine profile of the epithelial cell rests of Malassez

An open-label, prospective phase I/II study evaluating the immunogenicity and safety of a ras peptide vaccine plus GM-CSF in patients with non-small cell lung cancer

Meyer, Ralf G.; Korn, Stephanie; Micke, Patrick; Becker, Kai et al.

Ingår i Lung Cancer, s. 88-94, 2007

• DOI för An open-label, prospective phase I/II study evaluating the immunogenicity and safety of a ras peptide vaccine plus GM-CSF in patients with non-small cell lung cancer

In Situ Identification of Genes Regulated Specifically in Fibroblasts of Human Basal Cell Carcinoma

Micke, Patrick; Kappert, Kai; Ohshima, Mitsuhiro; Sundquist, Christina et al.

Ingår i Journal of Investigative Dermatology, s. 1516-1523, 2007

• DOI för In Situ Identification of Genes Regulated Specifically in Fibroblasts of Human Basal Cell Carcinoma

Dynamic changes in the expression of DEP-1 and other PDGF receptor-antagonizing PTPs during onset and termination of neointima formation

Kappert, Kai; Paulsson, Janna; Sparwel, Jan; Leppänen, Olli et al.

Ingår i The FASEB Journal, s. 523-534, 2007

• DOI för Dynamic changes in the expression of DEP-1 and other PDGF receptor-antagonizing PTPs during onset and termination of neointima formation

Biobanking of fresh frozen tissue: RNA is stable in nonfixed surgical specimens.

Micke, Patrick; Ohshima, Mitsuhiro; Tahmasebpoor, Simin; Ren, Zhi-Ping et al.

Ingår i Lab Invest, s. 202-11, 2006

Cytokine profile in synovial fluid from patients with internal derangement of the temporomandibular joint: a preliminary study.

Matsumoto, K; Honda, K; Ohshima, M; Yamaguchi, Y et al.

Ingår i Dentomaxillofac Radiol, s. 432-41, 2006

Exploring the tumour environment: cancer-associated fibroblasts as targets in cancer therapy.

Micke, Patrick; Ostman, Arne

Ingår i Expert Opin Ther Targets, s. 1217-33, 2005

Laser-assisted cell microdissection using the PALM system.

Micke, Patrick; Östman, Arne; Lundeberg, Joakim; Ponten, Fredrik

Ingår i Methods Mol Biol, s. 151-66, 2005

A fluid cover medium provides superior morphology and preserves RNA integrity in tissue sections for laser microdissection and pressure catapulting

Micke, Patrick; Bjørnsen, Tone; Scheidl, Stefan; Strömberg, Sara et al.

Ingår i J Pathol, s. 130-8, 2004

Platelet-derived growth factor production by B16 melanoma cells leads to increased pericyte abundance in tumors and an associated increase in tumor growth rate

Furuhashi, Masao; Sjöblom, Tobias; Abramsson, Alexandra; Ellingsen, Jens et al.

Ingår i Cancer Research, s. 2725-2733, 2004

• DOI för Platelet-derived growth factor production by B16 melanoma cells leads to increased pericyte abundance in tumors and an associated increase in tumor growth rate

Zinc-based fixative improves preservation of genomic DNA and proteins in histoprocessing of human tissues.

Wester, Kenneth; Asplund, Anna; Bäckvall, Helena; Micke, Patrick et al.

Ingår i Lab Invest, s. 889-99, 2003

Characterization of c-kit expression in small cell lung cancer: prognostic and therapeutic implications

Micke, Patrick; Basrai, Maryam; Faldum, Andreas; Bittinger, Fernando et al.

Ingår i Clinical Cancer Research, s. 188-194, 2003

Downregulation of bradykinin B2 receptor in human fibroblasts during prolonged agonist exposure

Blaukat, Andree; Micke, Patrick; Kalatskaya, Irina; Faussner, Alexander et al.

Ingår i American Journal of Physiology. Heart and Circulatory Physiology, 2003

• DOI för Downregulation of bradykinin B2 receptor in human fibroblasts during prolonged agonist exposure

COX-2 expression and effects of celecoxib in addition to standard chemotherapy in advanced non-small cell lung cancer.

Gulyas, Miklos; Mattsson, Johanna Sofia Margareta; Lindgren, Andrea; Ek, Lars et al.

Diagnostic Value of Insulinoma-Associated Protein 1 (INSM1) and Comparison With Established Neuroendocrine Markers in Pulmonary Cancers: A Comprehensive Study and Review of the Literature

Staaf, Johan; Tran, Lena; Söderlund, Linnea; Nodin, Björn et al.

Ingår i Archives of Pathology & Laboratory Medicine, s. 1075-1085, 2020

• DOI för Diagnostic Value of Insulinoma-Associated Protein 1 (INSM1) and Comparison With Established Neuroendocrine Markers in Pulmonary Cancers: A Comprehensive Study and Review of the Literature

The Role of TGF- Signaling in Lung Cancer Associated with Idiopathic Pulmonary Fibrosis

Saito, Akira; Horie, Masafumi; Micke, Patrick; Nagase, Takahide

Ingår i International Journal of Molecular Sciences, 2018

• DOI för The Role of TGF- Signaling in Lung Cancer Associated with Idiopathic Pulmonary Fibrosis
• Ladda ner fulltext (pdf) av The Role of TGF- Signaling in Lung Cancer Associated with Idiopathic Pulmonary Fibrosis

Immunohistochemistry-based prognostic biomarkers in NSCLC: novel findings on the road to clinical use?

Lindskog, Cecilia; Edlund, Karolina; Mattsson, Johanna Sofia Margareta; Micke, Patrick

Ingår i Expert Review of Molecular Diagnostics, s. 471-490, 2015

• DOI för Immunohistochemistry-based prognostic biomarkers in NSCLC: novel findings on the road to clinical use?

Prognostic relevance of cancer-associated fibroblasts in human cancer

Paulsson, Janna; Micke, Patrick

Ingår i Seminars in Cancer Biology, s. 61-68, 2014

• DOI för Prognostic relevance of cancer-associated fibroblasts in human cancer

Tumour-stroma interaction: cancer-associated fibroblasts as novel targets in anti-cancer therapy?

Micke, Patrick; Östman, Arne

Ingår i Lung Cancer, 2004

Isolated Channel Vision Transformers: From Single-Channel Pretraining to Multi-Channel Finetuning

Lian, Wenyi; Micke, Patrick; Lindblad, Joakim; Sladoje, Nataša

2025

Extending the immune phenotypes of lung cancer: Oasis in the desert

Backman, Max; La Fleur, Linnea; Kurppa, Pinja; Djureinovic, Dijana et al.

Antibody targeting of tumor associated macrophages in lung cancer remodel the tumor microenvironment and revives immune targeting of tumor cells

Sarhan, Dhifaf; La Fleur, Linnea; LI, Shuijie; Palano, Giorgia et al.

Plasma proteomic analysis in non-small cell lung cancer patients treated with PD1/PD-L1 blockade

Eltahir, Mohamed; Isaksson, Johan; Mattsson, Johanna Sofia Margareta; Kärre, Klas et al.

Highly selective in situ detection of mutant transcripts with gap-fill padlock probes and superRCA

Wang, Mengqi; Chen, Lei; Micke, Patrick; Strell, Carina et al.

From Cells to Survival: Hierarchical Analysis of Cell Inter-Relations in Multiplex Microscopy for Lung Cancer Prognosis

Edgren Schüllerqvist, Olle; Baumann, Jens; Lindblad, Joakim; Nordling, Love et al.

• DOI för From Cells to Survival: Hierarchical Analysis of Cell Inter-Relations in Multiplex Microscopy for Lung Cancer Prognosis
• Ladda ner fulltext (pdf) av From Cells to Survival: Hierarchical Analysis of Cell Inter-Relations in Multiplex Microscopy for Lung Cancer Prognosis