Limnology
The study of inland water ecosystems

Limnology is the study of inland water ecosystems, including interactions of communities and populations, organisms ranging from microorganisms to predatory fish and the biogeochemical cycling of nutrients. Our research includes fundamental scientific questions, as well as applied topics of concern for the protection and management of the aquatic environment. The department includes three major research groups, which have a considerable amount of synergy and cooperation between them:

What is Limnology?
Perhaps the most common comment when we say "I am a limnologist" is something like "You're a what?". So let us try to answer this question here.
The term "limnology" comes from the Greek words limne, "lake", and logos, "knowledge". Limnology encompasses not only lakes but includes all forms of inland waters. Inland waters exist in a variety of forms: they include lakes and reservoirs, streams and rivers, ponds and wetlands, and even a roadside ditch. Most lakes contain fresh water, but it is actually not uncommon that the water has high salinity. For example, the world's largest lake, the Caspian Sea, is salty.
We investigate how various organisms living in inland waters interact with their environment. By doing so, we deal with fundamental ecological questions that have relevance for real-world issues like water quality, drinking water safety and the impact of hydropower dams. Limnology is about understanding entire ecosystems, so our work spans from physical and chemical processes to population ecology. We participate in long-term ecological observations through our field station at Lake Erken, which is part of a national network of research stations (SITES) and a worldwide global observation program of lakes (GLEON).
One example of the processes we study is the transport of organic substances by water flowing via streams, rivers and lakes to the sea. These organic substances are flushed into streams and lakes from the surrounding soils, but what happens to them in the water? Are they stored in the sediment at the bottom of the lakes? Are they just flushed by rivers to the sea, or are they degraded to gases on the way, and evaded to the atmosphere, for example as carbon dioxide?
We also do a lot of research on the activity and diversity of microorganisms in inland waters. Even though microbes may not be the first thing that comes to your mind when looking at a lake, they play a key role in the functioning of inland water ecosystems. At the other end of the size spectrum, we investigate the shape of fish shape, and how fish are shaped by ecological processes.
A limnologist's skills are needed in a number of applications, for example in tackling drinking water quality issues, finding measures to reduce algal blooms, developing sustainable fishing practices, and the restoration of rivers and wetlands.
Welcome to the exciting world of Limnology!

Erken Field Station
The Erken laboratory, is our field station located at Lake Erken. Since the 1940s, Erken has functioned as an important site for both research and teaching at Uppsala University. This rich history has resulted in one of the world's longest monitoring programs including important time series of lake environmental conditions! Accredited chemical water analyses are carried out at the research station. There are also many ongoing activities with society to teach children about aquatic ecosystems, ranging from preschool students to upper secondary school.
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Education
At Limnology, we are responsible for the specialisation on Ecosystems and Aquatic Ecology within the MSc program in Biology. The specialisation includes one year of courses, and the MSc thesis can be performed within one of our research groups. There is a lot of freedom to tailor your studies according to your interests!
Contact information
Head of program
Prof. Silke Langenheder
018-471 27 10
silke.langenheder@ebc.uu.se
Visiting address
Limnology
Department of Ecology and Genetics
Evolutionary Biology Centre (EBC)
Uppsala University
Norbyvägen 18D
752 36 Uppsala
Delivery address
Limnology
Department of Ecology and Genetics
Evolutionary Biology Centre (EBC)
Kåbovägen 4, hus 7
752 36 Uppsala
People
Publications
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Part of Limnology and Oceanography Letters, 2026
- DOI for The Zooplankton International Geospatial dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research
- Download full text (pdf) of The Zooplankton International Geospatial dataset: A global repository of spatiotemporal freshwater zooplankton community composition data from lakes and reservoirs to support ecological research
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Part of Journal of Hazardous Materials Advances, 2026
- DOI for Seasonal trends of PFAS concentrations in surface waters and fate during managed aquifer recharge (MAR)
- Download full text (pdf) of Seasonal trends of PFAS concentrations in surface waters and fate during managed aquifer recharge (MAR)
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A consolidated database of mercury observations for permafrost regions
Part of Earth System Science Data, p. 4509-4522, 2026
- DOI for A consolidated database of mercury observations for permafrost regions
- Download full text (pdf) of A consolidated database of mercury observations for permafrost regions
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Part of ISME Communications, 2026
- DOI for Coupling of nutrient bioavailability and nutrient ratios to microbial community structure and functional potential in lakes
- Download full text (pdf) of Coupling of nutrient bioavailability and nutrient ratios to microbial community structure and functional potential in lakes
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Legacy permafrost conditions limit deep carbon decomposition in thermokarst peatlands and ponds
Part of Communications Earth & Environment, 2026
- DOI for Legacy permafrost conditions limit deep carbon decomposition in thermokarst peatlands and ponds
- Download full text (pdf) of Legacy permafrost conditions limit deep carbon decomposition in thermokarst peatlands and ponds
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Part of Environmental Science and Technology, p. 16607-16617, 2026
- DOI for Universal Apparent Quantum Yield Model Manifests a Dual Role of Dissolved Organic Matter as Sensitizer and Inhibitor of Methylmercury Photodegradation in Lakes
- Download full text (pdf) of Universal Apparent Quantum Yield Model Manifests a Dual Role of Dissolved Organic Matter as Sensitizer and Inhibitor of Methylmercury Photodegradation in Lakes
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Part of Sustainability Science, p. 1023-1038, 2026
- DOI for Learn to listen and listen to learn: reflections from a co-production process between researchers and composers
- Download full text (pdf) of Learn to listen and listen to learn: reflections from a co-production process between researchers and composers
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Part of GoodIT '22, p. 236-243, 2022
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A lightweight deepwater oxygen model for investigating lake responses to future climate
Part of Environmental Modelling & Software, p. 106941-106941, 2026
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Part of Geoscientific Model Development, p. 4095-4135, 2026
- DOI for Scenario set-up and the new CMIP6-based climate-related forcings provided within the third round of the Inter-Sectoral Model Intercomparison Project (ISIMIP3b, group I and II)
- Download full text (pdf) of Scenario set-up and the new CMIP6-based climate-related forcings provided within the third round of the Inter-Sectoral Model Intercomparison Project (ISIMIP3b, group I and II)