Marco Cavalli

Risk of venous thromboembolism after SARS-CoV-2 vaccination - evidence from genome-wide association study and population-based observational study

Attelind, Sofia; Eriksson, Niclas; Cavalli, Marco; Xu, Yiyi et al.

2026

Evaluating IL1RA-Autoantibodies Across SARS-CoV-2-Related Diseases

Behere, Anish; Hallberg, Pär; Cederholm, Axel; Cavalli, Marco et al.

Part of Scandinavian Journal of Immunology, 2025

• DOI for Evaluating IL1RA-Autoantibodies Across SARS-CoV-2-Related Diseases
• Download full text (pdf) of Evaluating IL1RA-Autoantibodies Across SARS-CoV-2-Related Diseases

Genome-wide association study of myocarditis and pericarditis following COVID-19 vaccination

Cavalli, Marco; Eriksson, Niclas; Baron, Tomasz; Yalcinkaya, Ahmet et al.

Part of npj Vaccines, 2025

• DOI for Genome-wide association study of myocarditis and pericarditis following COVID-19 vaccination
• Download full text (pdf) of Genome-wide association study of myocarditis and pericarditis following COVID-19 vaccination

No link between type I interferon autoantibody positivity and adverse reactions to COVID-19 vaccines

Yalcinkaya, Ahmet; Cavalli, Marco; Cederholm, Axel; Aranda-Guillen, Maribel et al.

Part of npj Vaccines, 2024

• DOI for No link between type I interferon autoantibody positivity and adverse reactions to COVID-19 vaccines
• Download full text (pdf) of No link between type I interferon autoantibody positivity and adverse reactions to COVID-19 vaccines

Autoantibodies to protein S may explain rare cases of coagulopathy following COVID-19 vaccination

Yalcinkaya, Ahmet; Cavalli, Marco; Aranda-Guillén, Maribel; Cederholm, Axel et al.

Part of Scientific Reports, 2024

• DOI for Autoantibodies to protein S may explain rare cases of coagulopathy following COVID-19 vaccination
• Download full text (pdf) of Autoantibodies to protein S may explain rare cases of coagulopathy following COVID-19 vaccination

Evaluating IL1RA-Autoantibodies Across SARS-CoV-2-Related Diseases

Behere, Anish; Hallberg, Pär; Cederholm, Axel; Cavalli, Marco et al.

Part of Scandinavian Journal of Immunology, 2025

• DOI for Evaluating IL1RA-Autoantibodies Across SARS-CoV-2-Related Diseases
• Download full text (pdf) of Evaluating IL1RA-Autoantibodies Across SARS-CoV-2-Related Diseases

Genome-wide association study of myocarditis and pericarditis following COVID-19 vaccination

Cavalli, Marco; Eriksson, Niclas; Baron, Tomasz; Yalcinkaya, Ahmet et al.

Part of npj Vaccines, 2025

• DOI for Genome-wide association study of myocarditis and pericarditis following COVID-19 vaccination
• Download full text (pdf) of Genome-wide association study of myocarditis and pericarditis following COVID-19 vaccination

No link between type I interferon autoantibody positivity and adverse reactions to COVID-19 vaccines

Yalcinkaya, Ahmet; Cavalli, Marco; Cederholm, Axel; Aranda-Guillen, Maribel et al.

Part of npj Vaccines, 2024

• DOI for No link between type I interferon autoantibody positivity and adverse reactions to COVID-19 vaccines
• Download full text (pdf) of No link between type I interferon autoantibody positivity and adverse reactions to COVID-19 vaccines

Autoantibodies to protein S may explain rare cases of coagulopathy following COVID-19 vaccination

Yalcinkaya, Ahmet; Cavalli, Marco; Aranda-Guillén, Maribel; Cederholm, Axel et al.

Part of Scientific Reports, 2024

• DOI for Autoantibodies to protein S may explain rare cases of coagulopathy following COVID-19 vaccination
• Download full text (pdf) of Autoantibodies to protein S may explain rare cases of coagulopathy following COVID-19 vaccination

A regulatory element associated to NAFLD in the promoter of DIO1 controls LDL-C, HDL-C and triglycerides in hepatic cells

Castillejo-López, Casimiro; Walls, Jose Ramon Barcenas; Cavalli, Marco; Larsson, Anders et al.

Part of Lipids in Health and Disease, 2024

• DOI for A regulatory element associated to NAFLD in the promoter of DIO1 controls LDL-C, HDL-C and triglycerides in hepatic cells
• Download full text (pdf) of A regulatory element associated to NAFLD in the promoter of DIO1 controls LDL-C, HDL-C and triglycerides in hepatic cells

Genome-wide association study of liver enzyme elevation in an extended cohort of rheumatoid arthritis patients starting low-dose methotrexate

Cavalli, Marco; Eriksson, Niclas; Karlsson Sundbaum, Johanna; Wallenberg, Matilda et al.

Part of Pharmacogenomics (London), p. 813-820, 2022

• DOI for Genome-wide association study of liver enzyme elevation in an extended cohort of rheumatoid arthritis patients starting low-dose methotrexate
• Download full text (pdf) of Genome-wide association study of liver enzyme elevation in an extended cohort of rheumatoid arthritis patients starting low-dose methotrexate

scSPLAT, a scalable plate-based protocol for single cell WGBS library preparation

Raine, Amanda; Lundmark, Anders; Annett, Alva; Wiman, Ann-Christin et al.

Part of Scientific Reports, 2022

• DOI for scSPLAT, a scalable plate-based protocol for single cell WGBS library preparation
• Download full text (pdf) of scSPLAT, a scalable plate-based protocol for single cell WGBS library preparation

Organ-specific metabolic pathways distinguish prediabetes, type 2 diabetes, and normal tissues

Diamanti, Klev; Cavalli, Marco; Pereira, Maria J.; Pan, Gang et al.

Part of Cell Reports Medicine, 2022

• DOI for Organ-specific metabolic pathways distinguish prediabetes, type 2 diabetes, and normal tissues
• Download full text (pdf) of Organ-specific metabolic pathways distinguish prediabetes, type 2 diabetes, and normal tissues

Multifaceted regulation of hepatic lipid metabolism by YY1

Pan, Gang; Diamanti, Klev; Cavalli, Marco; Gutierrez, Ariadna Lara et al.

Part of Life Science Alliance, 2021

• DOI for Multifaceted regulation of hepatic lipid metabolism by YY1
• Download full text (pdf) of Multifaceted regulation of hepatic lipid metabolism by YY1

The Thioesterase ACOT1 as a Regulator of Lipid Metabolism in Type 2 Diabetes Detected in a Multi-Omics Study of Human Liver

Cavalli, Marco; Diamanti, Klev; Dang, Yonglong; Xing, Pengwei et al.

Part of Omics, p. 652-659, 2021

• DOI for The Thioesterase ACOT1 as a Regulator of Lipid Metabolism in Type 2 Diabetes Detected in a Multi-Omics Study of Human Liver
• Download full text (pdf) of The Thioesterase ACOT1 as a Regulator of Lipid Metabolism in Type 2 Diabetes Detected in a Multi-Omics Study of Human Liver

Genome-wide association study of liver enzyme elevation in rheumatoid arthritis patients starting methotrexate

Karlsson Sundbaum, Johanna; Baecklund, Eva; Eriksson, Niclas; Kohnke, Hugo et al.

Part of Pharmacogenomics (London), p. 973-982, 2021

• DOI for Genome-wide association study of liver enzyme elevation in rheumatoid arthritis patients starting methotrexate
• Download full text (pdf) of Genome-wide association study of liver enzyme elevation in rheumatoid arthritis patients starting methotrexate

Single nucleus transcriptomics data integration recapitulates the major cell types in human liver

Diamanti, Klev; Inda Díaz, Juan Salvador; Raine, Amanda; Pan, Gang et al.

Part of Hepatology Research, p. 233-238, 2021

• DOI for Single nucleus transcriptomics data integration recapitulates the major cell types in human liver
• Download full text (pdf) of Single nucleus transcriptomics data integration recapitulates the major cell types in human liver

Variable degree of mosaicism for tetrasomy 18p in phenotypically discordant monozygotic twins-Diagnostic implications

Rydzanicz, Malgorzata; Olszewski, Pawel; Kedra, Darek; Davies, Hanna et al.

Part of Molecular Genetics & Genomic Medicine, 2021

• DOI for Variable degree of mosaicism for tetrasomy 18p in phenotypically discordant monozygotic twins-Diagnostic implications
• Download full text (pdf) of Variable degree of mosaicism for tetrasomy 18p in phenotypically discordant monozygotic twins-Diagnostic implications

Polymorphisms rs55710213 and rs56334587 regulate SCD1 expression by modulating HNF4A binding

Pan, Gang; Cavalli, Marco; Wadelius, Claes

Part of Biochimica et Biophysica Acta. Gene Regulatory Mechanisms, 2021

• DOI for Polymorphisms rs55710213 and rs56334587 regulate SCD1 expression by modulating HNF4A binding
• Download full text (pdf) of Polymorphisms rs55710213 and rs56334587 regulate SCD1 expression by modulating HNF4A binding

Integration of whole-body [¹⁸F]FDG PET/MRI with non-targeted metabolomics can provide new insights on tissue-specific insulin resistance in type 2 diabetes

Diamanti, Klev; Visvanathar, Robin; Pereira, Maria J.; Cavalli, Marco et al.

Part of Scientific Reports, 2020

• DOI for Integration of whole-body [¹⁸F]FDG PET/MRI with non-targeted metabolomics can provide new insights on tissue-specific insulin resistance in type 2 diabetes
• Download full text (pdf) of Integration of whole-body [¹⁸F]FDG PET/MRI with non-targeted metabolomics can provide new insights on tissue-specific insulin resistance in type 2 diabetes

Genome-wide association study of angioedema induced by angiotensin-converting enzyme inhibitor and angiotensin receptor blocker treatment.

Rasmussen, Eva Rye; Hallberg, Pär; Baranova, Ekaterina V; Eriksson, Niclas et al.

Part of The Pharmacogenomics Journal, p. 770-783, 2020

• DOI for Genome-wide association study of angioedema induced by angiotensin-converting enzyme inhibitor and angiotensin receptor blocker treatment.
• Download full text (pdf) of Genome-wide association study of angioedema induced by angiotensin-converting enzyme inhibitor and angiotensin receptor blocker treatment.

A Multi-Omics Approach to Liver Diseases: Integration of Single Nuclei Transcriptomics with Proteomics and HiCap Bulk Data in Human Liver

Cavalli, Marco; Diamanti, Klev; Pan, Gang; Spalinskas, Rapolas et al.

Part of Omics, p. 180-194, 2020

• DOI for A Multi-Omics Approach to Liver Diseases: Integration of Single Nuclei Transcriptomics with Proteomics and HiCap Bulk Data in Human Liver
• Download full text (pdf) of A Multi-Omics Approach to Liver Diseases: Integration of Single Nuclei Transcriptomics with Proteomics and HiCap Bulk Data in Human Liver

rs953413 Regulates Polyunsaturated Fatty Acid Metabolism by Modulating ELOVL2 Expression

Pan, Gang; Cavalli, Marco; Carlsson, Björn; Skrtic, Stanko et al.

Part of iScience, 2020

• DOI for rs953413 Regulates Polyunsaturated Fatty Acid Metabolism by Modulating ELOVL2 Expression
• Download full text (pdf) of rs953413 Regulates Polyunsaturated Fatty Acid Metabolism by Modulating ELOVL2 Expression

Studies of liver tissue identify functional gene regulatory elements associated to gene expression, type 2 diabetes, and other metabolic diseases

Cavalli, Marco; Baltzer, Nicholas; Pan, Gang; Walls, Jose Ramon Barcenas et al.

Part of Human Genomics, 2019

• DOI for Studies of liver tissue identify functional gene regulatory elements associated to gene expression, type 2 diabetes, and other metabolic diseases
• Download full text (pdf) of Studies of liver tissue identify functional gene regulatory elements associated to gene expression, type 2 diabetes, and other metabolic diseases

Allele specific chromatin signals, 3D interactions, and motif predictions for immune and B cell related diseases

Cavalli, Marco; Baltzer, Nicholas; Umer, Husen Muhammad; Grau, Jan et al.

Part of Scientific Reports, 2019

• DOI for Allele specific chromatin signals, 3D interactions, and motif predictions for immune and B cell related diseases
• Download full text (pdf) of Allele specific chromatin signals, 3D interactions, and motif predictions for immune and B cell related diseases

Intra- and inter-individual metabolic profiling highlights carnitine and lysophosphatidylcholine pathways as key molecular defects in type 2 diabetes

Diamanti, Klev; Cavalli, Marco; Pan, Gang; Pereira, Maria J et al.

Part of Scientific Reports, 2019

• DOI for Intra- and inter-individual metabolic profiling highlights carnitine and lysophosphatidylcholine pathways as key molecular defects in type 2 diabetes
• Download full text (pdf) of Intra- and inter-individual metabolic profiling highlights carnitine and lysophosphatidylcholine pathways as key molecular defects in type 2 diabetes

Pandemrix-induced narcolepsy is associated with genes related to immunity and neuronal survival

Hallberg, Pär; Smedje, Hans; Eriksson, Niclas; Kohnke, Hugo et al.

Part of EBioMedicine, p. 595-604, 2019

• DOI for Pandemrix-induced narcolepsy is associated with genes related to immunity and neuronal survival
• Download full text (pdf) of Pandemrix-induced narcolepsy is associated with genes related to immunity and neuronal survival

Genetic prevention of hepatitis C virus-induced liver fibrosis by allele-specific downregulation of MERTK

Cavalli, Marco; Pan, Gang; Nord, Helena; Wallén Arzt, Emelie et al.

Part of Hepatology Research, p. 826-830, 2017

• DOI for Genetic prevention of hepatitis C virus-induced liver fibrosis by allele-specific downregulation of MERTK

Genetic variants associated with angiotensin-converting enzyme inhibitor-induced cough: a genome-wide association study in a Swedish population

Hallberg, Pär; Persson, Matilda; Axelsson, Tomas; Cavalli, Marco et al.

Part of Pharmacogenomics (London), p. 201-213, 2017

• DOI for Genetic variants associated with angiotensin-converting enzyme inhibitor-induced cough: a genome-wide association study in a Swedish population
• Download full text (pdf) of Genetic variants associated with angiotensin-converting enzyme inhibitor-induced cough: a genome-wide association study in a Swedish population

PATZ1 down-regulates FADS1 by binding to rs174557 and is opposed by SP1/SREBP1c

Pan, Gang; Ameur, Adam; Enroth, Stefan; Bysani, Madhusudhan et al.

Part of Nucleic Acids Research, p. 2408-2422, 2017

• DOI for PATZ1 down-regulates FADS1 by binding to rs174557 and is opposed by SP1/SREBP1c

Maps of context-dependent putative regulatory regions and genomic signal interactions

Diamanti, Klev; Umer, Husen M.; Kruczyk, Marcin; Dabrowski, Michal J. et al.

Part of Nucleic Acids Research, p. 9110-9120, 2016

• DOI for Maps of context-dependent putative regulatory regions and genomic signal interactions
• Download full text (pdf) of Maps of context-dependent putative regulatory regions and genomic signal interactions

Looking beyond GWAS: allele-specific transcription factor binding drives the association of GALNT2 to HDL-C plasma levels

Cavalli, Marco; Pan, Gang; Nord, Helena; Wadelius, Claes

Part of Lipids in Health and Disease, 2016

• DOI for Looking beyond GWAS: allele-specific transcription factor binding drives the association of GALNT2 to HDL-C plasma levels
• Download full text (pdf) of Looking beyond GWAS: allele-specific transcription factor binding drives the association of GALNT2 to HDL-C plasma levels

Allele-specific transcription factor binding in liver and cervix cells unveils many likely drivers of GWAS signals

Cavalli, Marco; Pan, Gang; Nord, Helena; Arzt, Emelie Wallén et al.

Part of Genomics, p. 248-254, 2016

• DOI for Allele-specific transcription factor binding in liver and cervix cells unveils many likely drivers of GWAS signals
• Download full text (pdf) of Allele-specific transcription factor binding in liver and cervix cells unveils many likely drivers of GWAS signals

Allele-specific transcription factor binding to common and rare variants associated with disease and gene expression

Cavalli, Marco; Pan, Gang; Nord, Helena; Wallerman, Ola et al.

Part of Human Genetics, p. 485-497, 2016

• DOI for Allele-specific transcription factor binding to common and rare variants associated with disease and gene expression
• Download full text (pdf) of Allele-specific transcription factor binding to common and rare variants associated with disease and gene expression

Novel regulatory variant detected on the VKORC1 haplotype that is associated with warfarin dose

Cavalli, Marco; Pan, Gang; Nord, Helena; Eriksson, Niclas et al.

Part of Pharmacogenomics (London), p. 1305-1314, 2016

• DOI for Novel regulatory variant detected on the VKORC1 haplotype that is associated with warfarin dose
• Download full text (pdf) of Novel regulatory variant detected on the VKORC1 haplotype that is associated with warfarin dose

A Significant Regulatory Mutation Burden at a High-Affinity Position of the CTCF Motif in Gastrointestinal Cancers

Umer, Husen M.; Cavalli, Marco; Dabrowski, Michal J.; Diamanti, Klev et al.

Part of Human Mutation, p. 904-913, 2016

• DOI for A Significant Regulatory Mutation Burden at a High-Affinity Position of the CTCF Motif in Gastrointestinal Cancers

Single Nuclei Transcriptome Analysis of Human Liver with Integration of Proteomics and Capture Hi-C Bulk Tissue Data

Cavalli, Marco; Diamanti, Klev; Pan, Gang; Rapolas, Spalinskas et al.

Risk of venous thromboembolism after SARS-CoV-2 vaccination - evidence from genome-wide association study and population-based observational study

Attelind, Sofia; Eriksson, Niclas; Cavalli, Marco; Xu, Yiyi et al.

2026

Integration of whole-body PET/MRI with non-targeted metabolomics provides new insights into insulin sensitivity of various tissues

Diamanti, Klev; Visvanathar, Robin; Pereira, Maria J; Cavalli, Marco et al.