Marie Wrande

Rapid evolution of Klebsiella pneumoniae biofilms in vitro delineates adaptive changes selected during infection

Zaborskyte, Greta; Coelho, Patrícia; Wrande, Marie; Sandegren, Linus

Part of Nature Communications, 2026

• DOI for Rapid evolution of Klebsiella pneumoniae biofilms in vitro delineates adaptive changes selected during infection
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Strain-Level Typing of Streptococcus pyogenes Using Optical DNA Mapping

Kunnath, Radhika N.; Abbaspour, Zahra; Johnning, Anna; Frykholm, Karolin et al.

Part of ACS - Infectious Diseases, p. 3085-3092, 2025

• DOI for Strain-Level Typing of Streptococcus pyogenes Using Optical DNA Mapping

DOGMA: de novo assembly of densely labelled optical DNA maps using a matrix profile approach

Dvirnas, Albertas; Leal-Garza, Luis Mario; Abbaspour, Zahra; Frobrant, Erik et al.

Part of PLOS ONE, 2025

• DOI for DOGMA: de novo assembly of densely labelled optical DNA maps using a matrix profile approach
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Reduced amplification by phi29 DNA polymerase in the presence of unbound oligos during reaction in RCA

Sánchez Martín, Darío; Li, Tingting; Wrande, Marie; Sandegren, Linus et al.

Part of Biosensors and Bioelectronics: X, 2024

• DOI for Reduced amplification by phi29 DNA polymerase in the presence of unbound oligos during reaction in RCA
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Pathogenic diversification of the gut commensal Providencia alcalifaciens via acquisition of a second type III secretion system

Klein, Jessica A.; Predeus, Alexander V.; Greissl, Aimee R.; Clark-Herrera, Mattie M. et al.

Part of Infection and Immunity, 2024

• DOI for Pathogenic diversification of the gut commensal Providencia alcalifaciens via acquisition of a second type III secretion system
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Rapid evolution of Klebsiella pneumoniae biofilms in vitro delineates adaptive changes selected during infection

Zaborskyte, Greta; Coelho, Patrícia; Wrande, Marie; Sandegren, Linus

Part of Nature Communications, 2026

• DOI for Rapid evolution of Klebsiella pneumoniae biofilms in vitro delineates adaptive changes selected during infection
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Strain-Level Typing of Streptococcus pyogenes Using Optical DNA Mapping

Kunnath, Radhika N.; Abbaspour, Zahra; Johnning, Anna; Frykholm, Karolin et al.

Part of ACS - Infectious Diseases, p. 3085-3092, 2025

• DOI for Strain-Level Typing of Streptococcus pyogenes Using Optical DNA Mapping

DOGMA: de novo assembly of densely labelled optical DNA maps using a matrix profile approach

Dvirnas, Albertas; Leal-Garza, Luis Mario; Abbaspour, Zahra; Frobrant, Erik et al.

Part of PLOS ONE, 2025

• DOI for DOGMA: de novo assembly of densely labelled optical DNA maps using a matrix profile approach
• Download full text (pdf) of DOGMA: de novo assembly of densely labelled optical DNA maps using a matrix profile approach

Reduced amplification by phi29 DNA polymerase in the presence of unbound oligos during reaction in RCA

Sánchez Martín, Darío; Li, Tingting; Wrande, Marie; Sandegren, Linus et al.

Part of Biosensors and Bioelectronics: X, 2024

• DOI for Reduced amplification by phi29 DNA polymerase in the presence of unbound oligos during reaction in RCA
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Pathogenic diversification of the gut commensal Providencia alcalifaciens via acquisition of a second type III secretion system

Klein, Jessica A.; Predeus, Alexander V.; Greissl, Aimee R.; Clark-Herrera, Mattie M. et al.

Part of Infection and Immunity, 2024

• DOI for Pathogenic diversification of the gut commensal Providencia alcalifaciens via acquisition of a second type III secretion system
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Strain-level bacterial typing directly from patient samples using optical DNA mapping

Nyblom, My; Johnning, Anna; Frykholm, Karolin; Wrande, Marie et al.

Part of Communications Medicine, 2023

• DOI for Strain-level bacterial typing directly from patient samples using optical DNA mapping
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Naked-eye detection of antibiotic resistance gene sul1 based on aggregation of magnetic nanoparticles and DNA amplification products

Sánchez Martín, Darío; Wrande, Marie; Sandegren, Linus; Zardán Gómez de la Torre, Teresa

Part of Biosensors and Bioelectronics: X, 2022

• DOI for Naked-eye detection of antibiotic resistance gene sul1 based on aggregation of magnetic nanoparticles and DNA amplification products
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A Parallelized Nanofluidic Device for High-Throughput Optical DNA Mapping of Bacterial Plasmids

KK, Sriram; Lin, Yii-Lih; Sewunet, Tsegaye; Wrande, Marie et al.

Part of Micromachines, 2021

• DOI for A Parallelized Nanofluidic Device for High-Throughput Optical DNA Mapping of Bacterial Plasmids
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Cultivation-Free Typing of Bacteria Using Optical DNA Mapping

Muller, Vilhelm; Nyblom, My; Johnning, Anna; Wrande, Marie et al.

Part of ACS - Infectious Diseases, p. 1076-1084, 2020

• DOI for Cultivation-Free Typing of Bacteria Using Optical DNA Mapping
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Acetate availability and utilization supports the growth of mutant sub-populations on aging bacterial colonies

Bergman, Jessica M; Wrande, Marie; Hughes, Diarmaid

Part of PLOS ONE, 2014

• DOI for Acetate availability and utilization supports the growth of mutant sub-populations on aging bacterial colonies
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Fitness-compensatory mutations in rifampicin-resistant RNA polymerase

Brandis, Gerrit; Wrande, Marie; Liljas, Lars; Hughes, Diarmaid

Part of Molecular Microbiology, p. 142-151, 2012

• DOI for Fitness-compensatory mutations in rifampicin-resistant RNA polymerase

Accumulation of mutants in "aging" bacterial colonies is due to growth under selection, not stress-induced mutagenesis

Wrande, Marie; Roth, John R.; Hughes, Diarmaid

Part of Proceedings of the National Academy of Sciences of the United States of America, p. 11863-11868, 2008

• DOI for Accumulation of mutants in "aging" bacterial colonies is due to growth under selection, not stress-induced mutagenesis

Growth in Aging Colonies: The Importance of Being Different

Wrande, Marie

2012

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Circle to circle amplification for detection of antibiotic resistance genes

Sánchez Martín, Darío; Wrande, Marie; Sandegren, Linus; Zardán Gómez de la Torre, Teresa

Part of Uppsala Antibiotic Days: a multidisciplinary conference, p. 37, 2022