Christian Tellgren-Roth

Functional annotation of a divergent genome using sequence and structure-based similarity

Svedberg, Dennis; Winiger, Rahel R.; Berg, Alexandra; Sharma, Himanshu et al.

Part of BMC Genomics, 2024

• DOI for Functional annotation of a divergent genome using sequence and structure-based similarity
• Download full text (pdf) of Functional annotation of a divergent genome using sequence and structure-based similarity

Long-read whole-genome analysis of human single cells

Hård, Joanna; Mold, Jeff E; Eisfeldt, Jesper; Tellgren-Roth, Christian et al.

Part of Nature Communications, 2023

• DOI for Long-read whole-genome analysis of human single cells
• Download full text (pdf) of Long-read whole-genome analysis of human single cells

The draft genome of the microscopic Nemertoderma westbladi sheds light on the evolution of Acoelomorpha genomes

Abalde, Samuel; Tellgren-Roth, Christian; Heintz, Julia; Vinnere Pettersson, Olga et al.

Part of Frontiers in Genetics, 2023

• DOI for The draft genome of the microscopic Nemertoderma westbladi sheds light on the evolution of Acoelomorpha genomes
• Download full text (pdf) of The draft genome of the microscopic Nemertoderma westbladi sheds light on the evolution of Acoelomorpha genomes

Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles

Kaufmann, Philipp; Wiberg, R. Axel W.; Papachristos, Konstantinos; Scofield, Douglas et al.

Part of Molecular biology and evolution, 2023

• DOI for Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles
• Download full text (pdf) of Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles

Comparative Genomics of Cyclic di-GMP Metabolism and Chemosensory Pathways in Shewanella algae Strains: Novel Bacterial Sensory Domains and Functional Insights into Lifestyle Regulation

Martin-Rodriguez, Alberto J.; Higdon, Shawn M.; Thorell, Kaisa; Tellgren-Roth, Christian et al.

Part of mSystems, 2022

• DOI for Comparative Genomics of Cyclic di-GMP Metabolism and Chemosensory Pathways in Shewanella algae Strains: Novel Bacterial Sensory Domains and Functional Insights into Lifestyle Regulation

Functional annotation of a divergent genome using sequence and structure-based similarity

Svedberg, Dennis; Winiger, Rahel R.; Berg, Alexandra; Sharma, Himanshu et al.

Part of BMC Genomics, 2024

• DOI for Functional annotation of a divergent genome using sequence and structure-based similarity
• Download full text (pdf) of Functional annotation of a divergent genome using sequence and structure-based similarity

Long-read whole-genome analysis of human single cells

Hård, Joanna; Mold, Jeff E; Eisfeldt, Jesper; Tellgren-Roth, Christian et al.

Part of Nature Communications, 2023

• DOI for Long-read whole-genome analysis of human single cells
• Download full text (pdf) of Long-read whole-genome analysis of human single cells

The draft genome of the microscopic Nemertoderma westbladi sheds light on the evolution of Acoelomorpha genomes

Abalde, Samuel; Tellgren-Roth, Christian; Heintz, Julia; Vinnere Pettersson, Olga et al.

Part of Frontiers in Genetics, 2023

• DOI for The draft genome of the microscopic Nemertoderma westbladi sheds light on the evolution of Acoelomorpha genomes
• Download full text (pdf) of The draft genome of the microscopic Nemertoderma westbladi sheds light on the evolution of Acoelomorpha genomes

Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles

Kaufmann, Philipp; Wiberg, R. Axel W.; Papachristos, Konstantinos; Scofield, Douglas et al.

Part of Molecular biology and evolution, 2023

• DOI for Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles
• Download full text (pdf) of Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles

Comparative Genomics of Cyclic di-GMP Metabolism and Chemosensory Pathways in Shewanella algae Strains: Novel Bacterial Sensory Domains and Functional Insights into Lifestyle Regulation

Martin-Rodriguez, Alberto J.; Higdon, Shawn M.; Thorell, Kaisa; Tellgren-Roth, Christian et al.

Part of mSystems, 2022

• DOI for Comparative Genomics of Cyclic di-GMP Metabolism and Chemosensory Pathways in Shewanella algae Strains: Novel Bacterial Sensory Domains and Functional Insights into Lifestyle Regulation

Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae

Tellgren-Roth, Christian; Thorell, Kaisa; Galperin, Michael Y.; Krell, Tino et al.

Part of Microbiology Resource Announcements, 2021

• DOI for Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae
• Download full text (pdf) of Complete Genome Sequence and Methylome of the Type Strain of Shewanella algae

Global similarity, and some key differences, in the metagenomes of Swedish varroa-surviving and varroa-susceptible honeybees

Thaduri, Srinivas; Marupakula, Srisailam; Terenius, Olle; Onorati, Piero et al.

Part of Scientific Reports, 2021

• DOI for Global similarity, and some key differences, in the metagenomes of Swedish varroa-surviving and varroa-susceptible honeybees
• Download full text (pdf) of Global similarity, and some key differences, in the metagenomes of Swedish varroa-surviving and varroa-susceptible honeybees

Loss of centromere function drives karyotype evolution in closely related Malassezia species

Sankaranarayanan, Sundar Ram; Ianiri, Giuseppe; Coelho, Marco A.; Reza, Md Hashim et al.

Part of eLIFE, 2020

• DOI for Loss of centromere function drives karyotype evolution in closely related Malassezia species
• Download full text (pdf) of Loss of centromere function drives karyotype evolution in closely related Malassezia species

The honeybee (Apis mellifera) developmental state shapes the genetic composition of the deformed wing virus-A quasispecies during serial transmission

Yanez, Orlando; Chavez-Galarza, Julio; Tellgren-Roth, Christian; Pinto, M. Alice et al.

Part of Scientific Reports, 2020

• DOI for The honeybee (Apis mellifera) developmental state shapes the genetic composition of the deformed wing virus-A quasispecies during serial transmission
• Download full text (pdf) of The honeybee (Apis mellifera) developmental state shapes the genetic composition of the deformed wing virus-A quasispecies during serial transmission

Genome-wide systematic identification of methyltransferase recognition and modification patterns

Jensen, Torbjorn Ölshöj; Tellgren-Roth, Christian; Redl, Stephanie; Maury, Jerome et al.

Part of Nature Communications, 2019

• DOI for Genome-wide systematic identification of methyltransferase recognition and modification patterns
• Download full text (pdf) of Genome-wide systematic identification of methyltransferase recognition and modification patterns

The architecture of the Plasmodiophora brassicae nuclear and mitochondrial genomes

Stjelja, Suzana; Fogelqvist, Johan; Tellgren-Roth, Christian; Dixelius, Christina

Part of Scientific Reports, 2019

• DOI for The architecture of the Plasmodiophora brassicae nuclear and mitochondrial genomes
• Download full text (pdf) of The architecture of the Plasmodiophora brassicae nuclear and mitochondrial genomes

The genomic footprint of sexual conflict

Sayadi, Ahmed; Martínez Barrio, Álvaro; Immonen, Elina; Dainat, Jacques et al.

Part of Nature Ecology & Evolution, p. 1725-1730, 2019

• DOI for The genomic footprint of sexual conflict
• Download full text (pdf) of The genomic footprint of sexual conflict

Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis

Zhu, Yafeng; Engstrom, Par G.; Tellgren-Roth, Christian; Baudo, Charles D. et al.

Part of Nucleic Acids Research, p. 2629-2643, 2017

• DOI for Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis
• Download full text (pdf) of Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis

The Evolution of Dark Matter in the Mitogenome of Seed Beetles

Sayadi, Ahmed; Immonen, Elina; Tellgren-Roth, Christian; Arnqvist, Göran

Part of Genome Biology and Evolution, p. 2697-2706, 2017

• DOI for The Evolution of Dark Matter in the Mitogenome of Seed Beetles
• Download full text (pdf) of The Evolution of Dark Matter in the Mitogenome of Seed Beetles

High frequency of silver resistance genes in invasive isolates of Enterobacter and Klebsiella species

Sütterlin, Susanne; Dahlö, Martin; Tellgren-Roth, Christian; Schaal, Wesley et al.

Part of Journal of Hospital Infection, p. 256-261, 2017

• DOI for High frequency of silver resistance genes in invasive isolates of Enterobacter and Klebsiella species

Complete Genome Sequences of the Xylose-Fermenting Candida intermedia Strains CBS 141442 and PYCC 4715

Moreno, Antonio D.; Tellgren-Roth, Christian; Soler, Lucile; Dainat, Jacques et al.

Part of Microbiology Resource Announcements, 2017

• DOI for Complete Genome Sequences of the Xylose-Fermenting Candida intermedia Strains CBS 141442 and PYCC 4715
• Download full text (pdf) of Complete Genome Sequences of the Xylose-Fermenting Candida intermedia Strains CBS 141442 and PYCC 4715

Fatal acquisition of vanD gene during vancomycin treatment of septicaemia caused by Enterococcus faecium

Starlander, Gustaf; Tellgren-Roth, Christian; Melhus, Åsa

Part of Journal of Hospital Infection, p. 409-410, 2016

• DOI for Fatal acquisition of vanD gene during vancomycin treatment of septicaemia caused by Enterococcus faecium

Second generation sequencing of microRNA in Human Bone Cells treated with Parathyroid Hormone or Dexamethasone

Laxman, Navya; Rubin, Carl-Johan; Mallmin, Hans; Nilsson, Olle et al.

Part of Bone, p. 181-188, 2016

• DOI for Second generation sequencing of microRNA in Human Bone Cells treated with Parathyroid Hormone or Dexamethasone

Fluctuating expression of microRNAs in adenovirus infected cells

Zhao, Hongxing; Chen, Maoshan; Tellgren-Roth, Christian; Pettersson, Ulf

Part of Virology, p. 99-111, 2015

• DOI for Fluctuating expression of microRNAs in adenovirus infected cells

Arabidopsis COP1 SUPPRESSOR 2 Represses COP1 E3 Ubiquitin Ligase Activity through Their Coiled-Coil Domains Association

Xu, Dongqing; Lin, Fang; Jiang, Yan; Ling, Junjie et al.

Part of PLOS Genetics, 2015

• DOI for Arabidopsis COP1 SUPPRESSOR 2 Represses COP1 E3 Ubiquitin Ligase Activity through Their Coiled-Coil Domains Association
• Download full text (pdf) of Arabidopsis COP1 SUPPRESSOR 2 Represses COP1 E3 Ubiquitin Ligase Activity through Their Coiled-Coil Domains Association

Genome and physiology of the ascomycete filamentous fungus Xeromyces bisporus, the most xerophilic organism isolated to date

Leong, Su-lin L.; Lantz, Henrik; Pettersson, Olga Vinnere; Frisvad, Jens C. et al.

Part of Environmental Microbiology, p. 496-513, 2015

• DOI for Genome and physiology of the ascomycete filamentous fungus Xeromyces bisporus, the most xerophilic organism isolated to date
• Download full text (pdf) of Genome and physiology of the ascomycete filamentous fungus Xeromyces bisporus, the most xerophilic organism isolated to date

An Exopolysaccharide-Deficient Mutant of Lactobacillus rhamnosus GG Efficiently Displays a Protective Llama Antibody Fragment against Rotavirus on Its Surface

Alvarez, Beatriz; Krogh-Andersen, Kasper; Tellgren-Roth, Christian; Martinez, Noelia et al.

Part of Applied and Environmental Microbiology, p. 5784-5793, 2015

• DOI for An Exopolysaccharide-Deficient Mutant of Lactobacillus rhamnosus GG Efficiently Displays a Protective Llama Antibody Fragment against Rotavirus on Its Surface

The RING-Finger E3 Ubiquitin Ligase COP1 SUPPRESSOR1 Negatively Regulates COP1 Abundance in Maintaining COP1 Homeostasis in Dark-Grown Arabidopsis Seedlings

Xu, Dongqing; Lin, Fang; Jiang, Yan; Huang, Xi et al.

Part of The Plant Cell, p. 1981-1991, 2014

• DOI for The RING-Finger E3 Ubiquitin Ligase COP1 SUPPRESSOR1 Negatively Regulates COP1 Abundance in Maintaining COP1 Homeostasis in Dark-Grown Arabidopsis Seedlings

Cluster of Infections Caused by Methicillin-Resistant Staphylococcus pseudintermedius in Humans in a Tertiary Hospital

Starlander, Gustaf; Borjesson, Stefan; Gronlund-Andersson, Ulrika; Tellgren-Roth, Christian et al.

Part of Journal of Clinical Microbiology, p. 3118-3120, 2014

• DOI for Cluster of Infections Caused by Methicillin-Resistant Staphylococcus pseudintermedius in Humans in a Tertiary Hospital

Gene rearrangements in hormone receptor negative breast cancers revealed by mate pair sequencing

Jiao, Xiang; Hooper, Sean D.; Djureinovic, Tatjana; Larsson, Chatarina et al.

Part of BMC Genomics, 2013

• DOI for Gene rearrangements in hormone receptor negative breast cancers revealed by mate pair sequencing
• Download full text (pdf) of Gene rearrangements in hormone receptor negative breast cancers revealed by mate pair sequencing

Transcriptome of the Alternative Ethanol Production Strain Dekkera bruxellensis CBS 11270 in Sugar Limited, Low Oxygen Cultivation

Tiukova, Ievgeniia A.; Petterson, Mats E.; Tellgren-Roth, Christian; Bunikis, Ignas et al.

Part of PLOS ONE, 2013

• DOI for Transcriptome of the Alternative Ethanol Production Strain Dekkera bruxellensis CBS 11270 in Sugar Limited, Low Oxygen Cultivation
• Download full text (pdf) of Transcriptome of the Alternative Ethanol Production Strain Dekkera bruxellensis CBS 11270 in Sugar Limited, Low Oxygen Cultivation

Fine-Mapping of Restless Legs Locus 4 (RLS4) Identifies a Haplotype over the SPATS2L and KCTD18 Genes

Pichler, Irene; Schwienbacher, Christine; Zanon, Alessandra; Fuchsberger, Christian et al.

Part of Journal of Molecular Neuroscience, p. 600-605, 2013

• DOI for Fine-Mapping of Restless Legs Locus 4 (RLS4) Identifies a Haplotype over the SPATS2L and KCTD18 Genes

Genome-wide sequencing for the identification of rearrangements associated with Tourette syndrome and obsessive-compulsive disorder

Hooper, Sean D.; Johansson, Anna C. V.; Tellgren-Roth, Christian; Stattin, Eva-Lena et al.

Part of BMC Medical Genetics, p. 123, 2012

• DOI for Genome-wide sequencing for the identification of rearrangements associated with Tourette syndrome and obsessive-compulsive disorder
• Download full text (pdf) of Genome-wide sequencing for the identification of rearrangements associated with Tourette syndrome and obsessive-compulsive disorder

Evidence for Small RNAs Homologous to Effector-Encoding Genes and Transposable Elements in the Oomycete Phytophthora infestans

Vetukuri, Ramesh R.; Asman, Anna K. M.; Tellgren-Roth, Christian; Jahan, Sultana N. et al.

Part of PLOS ONE, 2012

• DOI for Evidence for Small RNAs Homologous to Effector-Encoding Genes and Transposable Elements in the Oomycete Phytophthora infestans
• Download full text (pdf) of Evidence for Small RNAs Homologous to Effector-Encoding Genes and Transposable Elements in the Oomycete Phytophthora infestans

The plastid redox insensitive 2 mutant of Arabidopsis is impaired in PEP activity and high light-dependent plastid redox signalling to the nucleus

Kindgren, Peter; Kremnev, Dmitry; Blanco, Nicolas E.; Lopez, Juan de Dios Barajas et al.

Part of The Plant Journal, p. 279-291, 2012

• DOI for The plastid redox insensitive 2 mutant of Arabidopsis is impaired in PEP activity and high light-dependent plastid redox signalling to the nucleus

A novel gammaherpesvirus isolated from a black-tailed prairie dog (Cynomys ludovicianus)

Nagamine, Brandy; Jones, Leandro; Tellgren-Roth, Christian; Cavender, Jacqueline et al.

Part of Archives of Virology, p. 1835-1840, 2011

• DOI for A novel gammaherpesvirus isolated from a black-tailed prairie dog (Cynomys ludovicianus)

Structural Alterations from Multiple Displacement Amplification of a Human Genome Revealed by Mate-Pair Sequencing

Jiao, Xiang; Rosenlund, Magnus; Hooper, Sean D.; Tellgren-Roth, Christian et al.

Part of PLOS ONE, 2011

• DOI for Structural Alterations from Multiple Displacement Amplification of a Human Genome Revealed by Mate-Pair Sequencing
• Download full text (pdf) of Structural Alterations from Multiple Displacement Amplification of a Human Genome Revealed by Mate-Pair Sequencing

Dual Targeting to Mitochondria and Chloroplasts: Characterization of Thr–tRNA Synthetase Targeting Peptide

Berglund, Anna-Karin; Spånning, Erika; Biverståhl, Henrik; Maddalo, Gianluca et al.

Part of Molecular Plant, p. 1298-1309, 2009

• DOI for Dual Targeting to Mitochondria and Chloroplasts: Characterization of Thr–tRNA Synthetase Targeting Peptide

Interpreting translocations detected by paired-end sequencing of cancer samples

Hooper, Sean D; Jiao, Xiang; Rosenlund, Magnus; Tellgren-Roth, Christian et al.

The Initial Epidemiology of a Major Clonal Outbreak Caused by VanB-Carrying Enterococcus faecium Clone ST192

Starlander, Gustaf; Sütterlin, Susanne; Tellgren-Roth, Christian; Melhus, Åsa

Assembly of polymorphic Y chromosomes reveals molecular basis of variation in male body size

Kaufmann, Philipp; Wiberg, R. Axel. W.; Paida, Varvara; Papachristos, Konstantinos et al.