Fredrik Johansson Swartling
- E-mail:
- fredrik.swartling@igp.uu.se
- Visiting address:
- Dag Hammarskjölds väg 20
751 85 Uppsala - Postal address:
- Rudbecklaboratoriet
751 85 UPPSALA

Publications
Recent publications
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Part of Nature Genetics, p. 143-156, 2026
- DOI for Investigation of a global mouse methylome atlas reveals subtype-specific copy number alterations in pediatric cancer models
- Download full text (pdf) of Investigation of a global mouse methylome atlas reveals subtype-specific copy number alterations in pediatric cancer models
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Childhood brain tumors instruct cranial hematopoiesis and immunotolerance
Part of Nature Genetics, p. 317-328, 2026
- DOI for Childhood brain tumors instruct cranial hematopoiesis and immunotolerance
- Download full text (pdf) of Childhood brain tumors instruct cranial hematopoiesis and immunotolerance
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A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies
Part of Cancer Cell, p. 831-845, 2026
- DOI for A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies
- Download full text (pdf) of A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies
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Part of Biochemical Pharmacology, 2026
- DOI for Albacarcin V adds EPLIN as a novel and promising target for the treatment of female cancers and pediatric medulloblastoma
- Download full text (pdf) of Albacarcin V adds EPLIN as a novel and promising target for the treatment of female cancers and pediatric medulloblastoma
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Part of Nature Communications, 2025
- DOI for scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples
- Download full text (pdf) of scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples
All publications
Articles in journal
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Part of Nature Genetics, p. 143-156, 2026
- DOI for Investigation of a global mouse methylome atlas reveals subtype-specific copy number alterations in pediatric cancer models
- Download full text (pdf) of Investigation of a global mouse methylome atlas reveals subtype-specific copy number alterations in pediatric cancer models
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Childhood brain tumors instruct cranial hematopoiesis and immunotolerance
Part of Nature Genetics, p. 317-328, 2026
- DOI for Childhood brain tumors instruct cranial hematopoiesis and immunotolerance
- Download full text (pdf) of Childhood brain tumors instruct cranial hematopoiesis and immunotolerance
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A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies
Part of Cancer Cell, p. 831-845, 2026
- DOI for A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies
- Download full text (pdf) of A tumor-associated photoreceptor signature unifies distinct central nervous system malignancies
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Part of Biochemical Pharmacology, 2026
- DOI for Albacarcin V adds EPLIN as a novel and promising target for the treatment of female cancers and pediatric medulloblastoma
- Download full text (pdf) of Albacarcin V adds EPLIN as a novel and promising target for the treatment of female cancers and pediatric medulloblastoma
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Part of Nature Communications, 2025
- DOI for scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples
- Download full text (pdf) of scFFPE-ATAC enables high-throughput single cell chromatin accessibility profiling in formalin-fixed paraffin-embedded samples
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Rolling Ultrasharp Microneedle Spheres Enable Topical Delivery of Biologics Through the Skin
Part of Advanced Healthcare Materials, 2025
- DOI for Rolling Ultrasharp Microneedle Spheres Enable Topical Delivery of Biologics Through the Skin
- Download full text (pdf) of Rolling Ultrasharp Microneedle Spheres Enable Topical Delivery of Biologics Through the Skin
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The transcription factor LHX2 mediates and enhances oncogenic BMP signaling in medulloblastoma
Part of Cell Death and Differentiation, p. 1915-1929, 2025
- DOI for The transcription factor LHX2 mediates and enhances oncogenic BMP signaling in medulloblastoma
- Download full text (pdf) of The transcription factor LHX2 mediates and enhances oncogenic BMP signaling in medulloblastoma
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Part of Cell Death and Disease, 2025
- DOI for Identification of a small molecule targeting EPLIN as a novel strategy for the treatment of pediatric neuroblastoma and medulloblastoma
- Download full text (pdf) of Identification of a small molecule targeting EPLIN as a novel strategy for the treatment of pediatric neuroblastoma and medulloblastoma
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Development of an orthotopic medulloblastoma zebrafish model for rapid drug testing
Part of Neuro-Oncology, p. 779-794, 2025
- DOI for Development of an orthotopic medulloblastoma zebrafish model for rapid drug testing
- Download full text (pdf) of Development of an orthotopic medulloblastoma zebrafish model for rapid drug testing
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An Indolin-3-imine Photobase and pH Sensitive Fluorophore
Part of ChemPhotoChem, 2023
- DOI for An Indolin-3-imine Photobase and pH Sensitive Fluorophore
- Download full text (pdf) of An Indolin-3-imine Photobase and pH Sensitive Fluorophore
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Identification of ATF3 as a novel protective signature of quiescent colorectal tumor cells
Part of Cell Death and Disease, 2023
- DOI for Identification of ATF3 as a novel protective signature of quiescent colorectal tumor cells
- Download full text (pdf) of Identification of ATF3 as a novel protective signature of quiescent colorectal tumor cells
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Photoinduced ring‐opening and phototoxicity of an indolin‐3‐one derivative
Part of Chemistry - A European Journal, 2023
- DOI for Photoinduced ring‐opening and phototoxicity of an indolin‐3‐one derivative
- Download full text (pdf) of Photoinduced ring‐opening and phototoxicity of an indolin‐3‐one derivative
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Part of Nature Communications, 2023
- DOI for ARF suppression by MYC but not MYCN confers increased malignancy of aggressive pediatric brain tumors
- Download full text (pdf) of ARF suppression by MYC but not MYCN confers increased malignancy of aggressive pediatric brain tumors
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Novel cancer gene discovery using a forward genetic screen in RCAS-PDGFB-driven gliomas
Part of Neuro-Oncology, p. 97-107, 2023
- DOI for Novel cancer gene discovery using a forward genetic screen in RCAS-PDGFB-driven gliomas
- Download full text (pdf) of Novel cancer gene discovery using a forward genetic screen in RCAS-PDGFB-driven gliomas
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Part of Cell Reports, 2022
- DOI for Article Basal cell carcinomas acquire secondary mutations to overcome dormancy and progress from microscopic to macroscopic disease
- Download full text (pdf) of Article Basal cell carcinomas acquire secondary mutations to overcome dormancy and progress from microscopic to macroscopic disease
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Dormant SOX9-Positive Cells Facilitate MYC-Driven Recurrence of Medulloblastoma
Part of Cancer Research, p. 4586-4603, 2022
- DOI for Dormant SOX9-Positive Cells Facilitate MYC-Driven Recurrence of Medulloblastoma
- Download full text (pdf) of Dormant SOX9-Positive Cells Facilitate MYC-Driven Recurrence of Medulloblastoma
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Part of Cancers, 2022
- DOI for Iron Chelator VLX600 Inhibits Mitochondrial Respiration and Promotes Sensitization of Neuroblastoma Cells in Nutrition-Restricted Conditions
- Download full text (pdf) of Iron Chelator VLX600 Inhibits Mitochondrial Respiration and Promotes Sensitization of Neuroblastoma Cells in Nutrition-Restricted Conditions
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Profiling chromatin accessibility in formalin-fixed paraffin-embedded samples
Part of Genome Research, p. 150-161, 2022
- DOI for Profiling chromatin accessibility in formalin-fixed paraffin-embedded samples
- Download full text (pdf) of Profiling chromatin accessibility in formalin-fixed paraffin-embedded samples
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Part of RSC Advances, p. 14544-14550, 2022
- DOI for Photophysical characterization and fluorescence cell imaging applications of 4-N-substituted benzothiadiazoles
- Download full text (pdf) of Photophysical characterization and fluorescence cell imaging applications of 4-N-substituted benzothiadiazoles
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Part of Nucleic Acids Research, 2021
- DOI for FACT-seq: profiling histone modifications in formalin-fixed paraffin-embedded samples with low cell numbers
- Download full text (pdf) of FACT-seq: profiling histone modifications in formalin-fixed paraffin-embedded samples with low cell numbers
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Part of Molecular Cancer Research, p. 1831-1839, 2021
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Part of Cancer Research, p. 2101-2115, 2021
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Part of RSC Advances, p. 23960-23967, 2021
- DOI for Indolylbenzothiadiazoles as highly tunable fluorophores for imaging lipid droplet accumulation in astrocytes and glioblastoma cells
- Download full text (pdf) of Indolylbenzothiadiazoles as highly tunable fluorophores for imaging lipid droplet accumulation in astrocytes and glioblastoma cells
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Part of Journal for ImmunoTherapy of Cancer, 2021
- DOI for Deep immune profiling reveals targetable mechanisms of immune evasion in immune checkpoint inhibitor-refractory glioblastoma
- Download full text (pdf) of Deep immune profiling reveals targetable mechanisms of immune evasion in immune checkpoint inhibitor-refractory glioblastoma
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A Patient-Derived Cell Atlas Informs Precision Targeting of Glioblastoma
Part of Cell Reports, 2020
- DOI for A Patient-Derived Cell Atlas Informs Precision Targeting of Glioblastoma
- Download full text (pdf) of A Patient-Derived Cell Atlas Informs Precision Targeting of Glioblastoma
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Perturbation-based gene regulatory network inference to unravel oncogenic mechanisms
Part of Scientific Reports, 2020
- DOI for Perturbation-based gene regulatory network inference to unravel oncogenic mechanisms
- Download full text (pdf) of Perturbation-based gene regulatory network inference to unravel oncogenic mechanisms
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Part of Cancers, 2020
- DOI for Nuclear Receptor Binding Protein 2 Is Downregulated in Medulloblastoma, and Reduces Tumor Cell Survival upon Overexpression
- Download full text (pdf) of Nuclear Receptor Binding Protein 2 Is Downregulated in Medulloblastoma, and Reduces Tumor Cell Survival upon Overexpression
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Modeling SHH-driven medulloblastoma with patient iPS cell-derived neural stem cells
Part of Proceedings of the National Academy of Sciences of the United States of America, p. 20127-20138, 2020
- DOI for Modeling SHH-driven medulloblastoma with patient iPS cell-derived neural stem cells
- Download full text (pdf) of Modeling SHH-driven medulloblastoma with patient iPS cell-derived neural stem cells
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BET and Aurora Kinase A inhibitors synergize against MYCN-positive human glioblastoma cells
Part of Cell Death and Disease, 2019
- DOI for BET and Aurora Kinase A inhibitors synergize against MYCN-positive human glioblastoma cells
- Download full text (pdf) of BET and Aurora Kinase A inhibitors synergize against MYCN-positive human glioblastoma cells
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Part of Journal of Pathology, p. 228-240, 2019
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Part of Bioinformatics, p. 3357-3364, 2019
- DOI for Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genes
- Download full text (pdf) of Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genes
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Part of Cell Stem Cell, p. 855-870, 2019
- DOI for Humanized Stem Cell Models of Pediatric Medulloblastoma Reveal an Oct4/mTOR Axis that Promotes Malignancy
- Download full text (pdf) of Humanized Stem Cell Models of Pediatric Medulloblastoma Reveal an Oct4/mTOR Axis that Promotes Malignancy
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Part of Cell Stem Cell, p. 433-+, 2019
- DOI for Engineering Genetic Predisposition in Human Neuroepithelial Stem Cells Recapitulates Medulloblastoma Tumorigenesis
- Download full text (pdf) of Engineering Genetic Predisposition in Human Neuroepithelial Stem Cells Recapitulates Medulloblastoma Tumorigenesis
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Notch1 regulates the initiation of metastasis and self-renewal of Group 3 medulloblastoma
Part of Nature Communications, 2018
- DOI for Notch1 regulates the initiation of metastasis and self-renewal of Group 3 medulloblastoma
- Download full text (pdf) of Notch1 regulates the initiation of metastasis and self-renewal of Group 3 medulloblastoma
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Combined BET bromodomain and CDK2 inhibition in MYC-driven medulloblastoma
Part of Oncogene, p. 2850-2862, 2018
- DOI for Combined BET bromodomain and CDK2 inhibition in MYC-driven medulloblastoma
- Download full text (pdf) of Combined BET bromodomain and CDK2 inhibition in MYC-driven medulloblastoma
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Microglia Induce PDGFRB Expression in Glioma Cells to Enhance Their Migratory Capacity
Part of iScience, p. 71-83, 2018
- DOI for Microglia Induce PDGFRB Expression in Glioma Cells to Enhance Their Migratory Capacity
- Download full text (pdf) of Microglia Induce PDGFRB Expression in Glioma Cells to Enhance Their Migratory Capacity
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Part of Neuro-Oncology, p. 139-139, 2018
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GMYC: A Novel Inducible Transgenic Model of Group 3 Medulloblastoma
Part of Neuro-Oncology, p. 137-137, 2018
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Part of Brain, p. 1300-1319, 2018
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Part of Frontiers in Oncology, 2017
- DOI for Mast Cell Infiltration in Human Brain Metastases Modulates the Microenvironment and Contributes to the Metastatic Potential
- Download full text (pdf) of Mast Cell Infiltration in Human Brain Metastases Modulates the Microenvironment and Contributes to the Metastatic Potential
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Part of Oncotarget, p. 24815-24827, 2017
- DOI for Serglycin as a potential biomarker for glioma: association of serglycin expression, extent of mast cell recruitment and glioblastoma progression
- Download full text (pdf) of Serglycin as a potential biomarker for glioma: association of serglycin expression, extent of mast cell recruitment and glioblastoma progression
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Part of Cancer Research, p. 802-812, 2017
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Targeting SOX9 for degradation to inhibit chemoresistance, metastatic spread, and recurrence
Part of Molecular & Cellular Oncology, 2017
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Loss of Conservation of Graph Centralities in Reverse-engineered Transcriptional Regulatory Networks
Part of Methodology and Computing in Applied Probability, p. 1089-1105, 2017
- DOI for Loss of Conservation of Graph Centralities in Reverse-engineered Transcriptional Regulatory Networks
- Download full text (pdf) of Loss of Conservation of Graph Centralities in Reverse-engineered Transcriptional Regulatory Networks
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Part of PLOS Genetics, 2016
- DOI for Utilizing the Dog Genome in the Search for Novel Candidate Genes Involved in Glioma Development-Genome Wide Association Mapping followed by Targeted Massive Parallel Sequencing Identifies a Strongly Associated Locus
- Download full text (pdf) of Utilizing the Dog Genome in the Search for Novel Candidate Genes Involved in Glioma Development-Genome Wide Association Mapping followed by Targeted Massive Parallel Sequencing Identifies a Strongly Associated Locus
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FBW7 suppression leads to SOX9 stabilization and increased malignancy in medulloblastoma
Part of EMBO Journal, p. 2192-2212, 2016
- DOI for FBW7 suppression leads to SOX9 stabilization and increased malignancy in medulloblastoma
- Download full text (pdf) of FBW7 suppression leads to SOX9 stabilization and increased malignancy in medulloblastoma
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Part of Cancer Cell, p. 72-84, 2015
- DOI for Combined MYC and P53 Defects Emerge at Medulloblastoma Relapse and Define Rapidly Progressive, Therapeutically Targetable Disease
- Download full text (pdf) of Combined MYC and P53 Defects Emerge at Medulloblastoma Relapse and Define Rapidly Progressive, Therapeutically Targetable Disease
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BET Bromodomain Inhibition of MYC-Amplified Medulloblastoma
Part of Clinical Cancer Research, p. 912-925, 2014
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Metastasis and Tumor Recurrence from Rare SOX9-Positive Cells in MYCN-Driven Medulloblastoma
Part of Neuro-Oncology, 2014
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Part of Neuro-Oncology, p. 90-90, 2014
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Glial origin for MYCN-driven medulloblastoma and targeted prosenescence therapies
Part of Cancer Research, 2014
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Metastasis and tumor recurrence from rare SOX9-positive cells in Group 4 medulloblastoma
Part of Cancer Research, 2014
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Part of Cancer Research, 2014
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Targeting the Translational Apparatus in Mycn-Driven Medulloblastoma
Part of Neuro-Oncology, p. 16-16, 2013
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Humanized Mouse Models for Medulloblastoma
Part of Neuro-Oncology, p. 30-30, 2013
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A glial origin for medulloblastoma and inhibition of MYCN stabilization
Part of Cancer Research, 2013
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miRNA-21 is developmentally regulated in mouse brain and is co-expressed with SOX2 in glioma
Part of BMC Cancer, p. 378, 2012
- DOI for miRNA-21 is developmentally regulated in mouse brain and is co-expressed with SOX2 in glioma
- Download full text (pdf) of miRNA-21 is developmentally regulated in mouse brain and is co-expressed with SOX2 in glioma
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Distinct Neural Stem Cell Populations Give Rise to Disparate Brain Tumors in Response to N-MYC
Part of Cancer Cell, p. 601-613, 2012
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Pleiotropic role for MYCN in medulloblastoma
Part of Genes & Development, p. 1059-1072, 2010
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Part of Oncogene, p. 3121-3131, 2009
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Part of Oncogene, p. 3896-3905, 2005
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Identification of candidate cancer-causing genes in mouse brain tumors by retroviral tagging
Part of Proceedings of the National Academy of Sciences of the United States of America, p. 11334-11337, 2004
Articles, review/survey
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Drivers Underlying Metastasis and Relapse in Medulloblastoma and Targeting Strategies
Part of Cancers, 2024
- DOI for Drivers Underlying Metastasis and Relapse in Medulloblastoma and Targeting Strategies
- Download full text (pdf) of Drivers Underlying Metastasis and Relapse in Medulloblastoma and Targeting Strategies
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Targeting MYCN in Molecularly Defined Malignant Brain Tumors
Part of Frontiers in Oncology, 2021
- DOI for Targeting MYCN in Molecularly Defined Malignant Brain Tumors
- Download full text (pdf) of Targeting MYCN in Molecularly Defined Malignant Brain Tumors
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Medulloblastomics revisited: biological and clinical insights from thousands of patients
Part of Nature Reviews. Cancer, p. 42-56, 2020
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Modeling and Targeting MYC Genes in Childhood Brain Tumors
Part of Genes, 2017
- DOI for Modeling and Targeting MYC Genes in Childhood Brain Tumors
- Download full text (pdf) of Modeling and Targeting MYC Genes in Childhood Brain Tumors
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Medulloblastoma: experimental models and reality
Part of Acta Neuropathologica, p. 679-689, 2017
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Deregulated proliferation and differentiation in brain tumors
Part of Cell and Tissue Research, p. 225-254, 2015
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Signals that regulate the oncogenic fate of neural stem cells and progenitors
Part of Experimental Neurology, p. 56-68, 2014
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Oncoprotein stabilization in brain tumors
Part of Oncogene, p. 4709-4721, 2014
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What underlies the diversity of brain tumors?
Part of Cancer Metastasis Review, p. 5-24, 2013
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Myc proteins in brain tumor development and maintenance
Part of Upsala Journal of Medical Sciences, p. 122-131, 2012
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Identifying Candidate Genes Involved in Brain Tumor Formation
Part of Upsala Journal of Medical Sciences, p. 1-38, 2008
Conference papers
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Comparing the Landcapes of Common Retroviral Insertion Sites across Tumor Models
Part of ICNPAA 2016 WORLD CONGRESS, 2017