Martin Ryberg
Professor at Department of Organismal Biology; Systematic Biology
- Telephone:
- +46 18 471 26 47
- E-mail:
- martin.ryberg@ebc.uu.se
- Visiting address:
- Evolutionsbiologiskt centrum, Norbyv. 18D
75236 Uppsala - Postal address:
- Norbyv. 18D
75236 Uppsala - Available:
- Tillsvidare
- Academic merits:
- PhD, Docent
Short presentation
Researcher in systematic biology with focus on Fungi. Teaching bioinformatics and macroevolution.

Publications
Recent publications
Part of Forest Ecology and Management, 2025
Evolution of a bipolar sexual compatibility system in Marasmius
Part of Mycologia, p. 19-33, 2025
- DOI for Evolution of a bipolar sexual compatibility system in Marasmius
- Download full text (pdf) of Evolution of a bipolar sexual compatibility system in Marasmius
Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)
Part of Journal of Fungi, 2025
- DOI for Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)
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Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum
Part of Fungal Biology, 2025
- DOI for Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum
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Part of New Phytologist, p. 219-234, 2024
- DOI for High rate of gene family evolution in proximity to the origin of ectomycorrhizal symbiosis in Inocybaceae
- Download full text (pdf) of High rate of gene family evolution in proximity to the origin of ectomycorrhizal symbiosis in Inocybaceae
All publications
Articles in journal
Part of Forest Ecology and Management, 2025
Evolution of a bipolar sexual compatibility system in Marasmius
Part of Mycologia, p. 19-33, 2025
- DOI for Evolution of a bipolar sexual compatibility system in Marasmius
- Download full text (pdf) of Evolution of a bipolar sexual compatibility system in Marasmius
Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)
Part of Journal of Fungi, 2025
- DOI for Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)
- Download full text (pdf) of Diversity and Multigene Phylogeny of the Genus Floccularia (Agaricales, Basidiomycota)
Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum
Part of Fungal Biology, 2025
- DOI for Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum
- Download full text (pdf) of Five new species in Piloderma (Atheliales, Basidiomycota) and epitypification of P. byssinum
Part of New Phytologist, p. 219-234, 2024
- DOI for High rate of gene family evolution in proximity to the origin of ectomycorrhizal symbiosis in Inocybaceae
- Download full text (pdf) of High rate of gene family evolution in proximity to the origin of ectomycorrhizal symbiosis in Inocybaceae
Part of MycoKeys, p. 273-285, 2024
- DOI for 20 years of bibliometric data illustrates a lack of concordance between journal impact factor and fungal species discovery in systematic mycology
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The 2024 Outline of Fungi and fungus-like taxa
Part of Mycosphere, p. 5146-6239, 2024
Part of BMC Biology, 2024
- DOI for The evolution of ectomycorrhizal symbiosis and host-plant switches are the main drivers for diversification of Amanitaceae (Agaricales, Basidiomycota)
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How, not if, is the question mycologists should be asking about DNA-based typification
Part of MycoKeys, p. 143-157, 2023
Phylogenetic diversity and affiliation of tropical African ectomycorrhizal fungi
Part of Mycosphere, p. 13-55, 2023
- DOI for Phylogenetic diversity and affiliation of tropical African ectomycorrhizal fungi
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Global consortium for the classification of fungi and fungus-like taxa
Part of Mycosphere, p. 1960-2012, 2023
- DOI for Global consortium for the classification of fungi and fungus-like taxa
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Part of Frontiers in Microbiology, 2023
- DOI for Cytological studies reveal high variation in ascospore number and shape and conidia produced directly from ascospores in Morchella galilaea
- Download full text (pdf) of Cytological studies reveal high variation in ascospore number and shape and conidia produced directly from ascospores in Morchella galilaea
Part of PLOS ONE, 2023
- DOI for A new species of Inosperma, and first record of I. afromelliolens (Inocybaceae, Fungi) from West Africa
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Part of Molecular Phylogenetics and Evolution, 2023
Impact of model assumptions on the inference of the evolution of ectomycorrhizal symbiosis in fungi
Part of Scientific Reports, 2022
- DOI for Impact of model assumptions on the inference of the evolution of ectomycorrhizal symbiosis in fungi
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Stage-specific transposon activity in the life cycle of the fairy-ring mushroom Marasmius oreades
Part of Proceedings of the National Academy of Sciences of the United States of America, 2022
Paxilloboletus gen. nov., a new lamellate bolete genus from tropical Africa
Part of Mycological progress, p. 243-256, 2022
- DOI for Paxilloboletus gen. nov., a new lamellate bolete genus from tropical Africa
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Amanita sect. Phalloideae: two interesting non-lethal species from West Africa
Part of Mycological progress, 2022
Part of Molecular Phylogenetics and Evolution, 2022
- DOI for Phylogeny and evolution of morphological structures in a highly diverse lineage of fruiting-body-forming amoebae, order Trichiales (Myxomycetes, Amoebozoa)
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On the evolution of ectomycorrhizal fungi
Part of Mycosphere, 2022
- DOI for On the evolution of ectomycorrhizal fungi
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The curse of the uncultured fungus
Part of MycoKeys, p. 177-194, 2022
- DOI for The curse of the uncultured fungus
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ARBitR: an overlap-aware genome assembly scaffolder for linked reads
Part of Bioinformatics, p. 2203-2205, 2021
- DOI for ARBitR: an overlap-aware genome assembly scaffolder for linked reads
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Part of Molecular Ecology Resources, p. 1833-1849, 2021
- DOI for Long- and short-read metabarcoding technologies reveal similar spatiotemporal structures in fungal communities
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Part of Fungal Biology, p. 239-255, 2021
- DOI for Multigene phylogeny and taxonomic revision of Atheliales s.l.: Reinstatement of three families and one new family, Lobuliciaceae fam. nov.
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Three new species of Inosperma (Agaricales, Inocybaceae) from Tropical Africa
Part of MycoKeys, p. 97-116, 2021
- DOI for Three new species of Inosperma (Agaricales, Inocybaceae) from Tropical Africa
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Soil fungal communities of ectomycorrhizal dominated woodlands across West Africa
Part of MycoKeys, p. 45-68, 2021
- DOI for Soil fungal communities of ectomycorrhizal dominated woodlands across West Africa
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Mallocybe africana (Inocybaceae, Fungi), the first species of Mallocybe described from Africa
Part of Phytotaxa, p. 49-60, 2021
- DOI for Mallocybe africana (Inocybaceae, Fungi), the first species of Mallocybe described from Africa
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FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles
Part of Fungal diversity, p. 1-16, 2020
Part of Frontiers in Microbiology, 2020
- DOI for Morphology, Multilocus Phylogeny, and Toxin Analysis Reveal Amanita albolimbata, the First Lethal Amanita Species From Benin, West Africa
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Part of IMA Fungus, 2020
- DOI for Naming the untouchable - environmental sequences and niche partitioning as taxonomical evidence in fungi
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Part of Proceedings of the National Academy of Sciences of the United States of America, p. 32528-32534, 2020
- DOI for Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi
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When mycologists describe new species, not all relevant information is provided (clearly enough)
Part of MycoKeys, p. 109-128, 2020
- DOI for When mycologists describe new species, not all relevant information is provided (clearly enough)
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The genus Catathelasma (Catathelasmataceae, Basidiomycota) in China
Part of MycoKeys, p. 123-138, 2020
- DOI for The genus Catathelasma (Catathelasmataceae, Basidiomycota) in China
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Part of Current Biology, p. 2758-2765, 2019
Part of Environmental Microbiology Reports, p. 155-166, 2018
Part of Ecology and Evolution, p. 1019-1030, 2018
- DOI for Complex effects of mammalian grazing on extramatrical mycelial biomass in the Scandes forest-tundra ecotone
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Two new African siblings of Pulveroboletus ravenelii (Boletaceae)
Part of MycoKeys, p. 115-130, 2018
- DOI for Two new African siblings of Pulveroboletus ravenelii (Boletaceae)
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Part of Environmental Microbiology, p. 1641-1650, 2018
Structure and function of the global topsoil microbiome.
Part of Nature, p. 233-237, 2018
High-level classification of the Fungi and a tool for evolutionary ecological analyses
Part of Fungal diversity, p. 135-159, 2018
- DOI for High-level classification of the Fungi and a tool for evolutionary ecological analyses
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New light on names and naming of dark taxa
Part of MycoKeys, p. 31-39, 2018
- DOI for New light on names and naming of dark taxa
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Part of MycoKeys, p. 13-24, 2017
- DOI for Read quality-based trimming of the distal ends of public fungal DNA sequences is nowhere near satisfactory
- Download full text (pdf) of Read quality-based trimming of the distal ends of public fungal DNA sequences is nowhere near satisfactory
Ranking higher taxa using divergence times: a case study in Dothideomycetes
Part of Fungal diversity, p. 75-99, 2017
Part of Molecular Ecology, p. 630-647, 2016
Part of F1000 Research, 2016
Part of MycoKeys, p. 29-40, 2016
Dating the emergence of truffle-like fungi in Australia, by using an augmented meta-analysis
Part of Australian Systematic Botany, p. 284-302, 2016
Part of MycoKeys, p. 1-15, 2016
- DOI for Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard - a report from a May 23-24, 2016 workshop (Gothenburg, Sweden)
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The evolution of Massarineae with Longipedicellataceae fam. nov.
Part of Mycosphere, p. 1713-1731, 2016
- DOI for The evolution of Massarineae with Longipedicellataceae fam. nov.
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Part of MycoKeys, p. 21-33, 2016
Part of Molecular Ecology, p. 5770-5777, 2015
Part of Mycological progress, 2015
Global Multilocus Sequence Type Analysis of Chlamydia trachomatis Strains from 16 Countries
Part of Journal of Clinical Microbiology, p. 2172-2179, 2015
Part of Microbes and Environments, p. 145-150, 2015
Part of Molecular Ecology, p. 4168-4183, 2014
Improving ITS sequence data for identification of plant pathogenic fungi
Part of Fungal diversity, p. 11-19, 2014
Part of Methods in Ecology and Evolution, p. 914-919, 2013
Evolution of the toxins muscarine and psilocybin in a family of mushroom-forming fungi.
Part of PLOS ONE, 2013
Part of Journal of Ecology, p. 1335-1344, 2013
A systematic, morphological and ecological overview of the Clavariaceae (Agaricales).
Part of Mycologia, p. 896-911, 2013
Incorporating molecular data in fungal systematics: a guide for aspiring researchers
Part of Current Research in Environmental & Applied Mycology, p. 1-32, 2013
Asynchronous origins of ectomycorrhizal clades of Agaricales.
Part of Proceedings of the Royal Society of London. Biological Sciences, p. 2003-11, 2012
Towards global patterns in the diversity and community structure of ectomycorrhizal fungi.
Part of Molecular Ecology, p. 4160-70, 2012
Scaling up: examining the macroecology of ectomycorrhizal fungi.
Part of Molecular Ecology, p. 4151-4, 2012
DivBayes and SubT: exploring species diversification using Bayesian statistics.
Part of Bioinformatics, p. 2439-40, 2011
Part of PloS one, 2011
Rethinking taxon sampling in the light of environmental sequencing
Part of Cladistics, p. 197-203, 2011
Part of Evolution, p. 1862-78, 2011
Part of Mycorrhiza, p. 289-96, 2011