Infektionsmedicin

A natural language processing approach to determine whether streamlined health technology assessment for multi-indication medicines is feasible

Luc, Isaiah; Carter, Drew; Bergman, Erik; Westman, Gabriel et al.

Ingår i PLOS Digital Health, 2026

• DOI för A natural language processing approach to determine whether streamlined health technology assessment for multi-indication medicines is feasible
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Antibiotic use and gut microbiome composition links from individual-level prescription data of 14,979 individuals

Baldanzi, Gabriel; Larsson, Anna; Sayols-Baixeras, Sergi; Dekkers, Koen et al.

Ingår i Nature Medicine, s. 1351-1361, 2026

• DOI för Antibiotic use and gut microbiome composition links from individual-level prescription data of 14,979 individuals
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Association between short-term exposure to air pollution and COVID-19: a case-crossover cohort study

Tornevi, Andreas; Janson, Christer; Palm, Andreas; Svartengren, Magnus et al.

Ingår i BMJ Open Respiratory Research, 2026

• DOI för Association between short-term exposure to air pollution and COVID-19: a case-crossover cohort study
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Chronic norovirus infection in a patient with Good's syndrome resolved after fecal microbiota transplantion and improved nutrional status

Edvinsson, Marie; Thelander, Anders; Dimopoulos, Nikolaos; Pauksens, Karlis

Ingår i Infectious Diseases, s. 453-458, 2026

• DOI för Chronic norovirus infection in a patient with Good's syndrome resolved after fecal microbiota transplantion and improved nutrional status
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Detection of human antibody responses to tick-borne Neoehrlichia mikurensis

Alsalihi, Rima; Andersson, Kerstin; Aranburu, Alaitz; Lingblom, Christine et al.

Ingår i Medical Microbiology and Immmunology, 2026

• DOI för Detection of human antibody responses to tick-borne Neoehrlichia mikurensis
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Diagnostic value of RT-PCR for detection of tick-borne encephalitis virus RNA in cerebrospinal fluid

Glans, Hedvig; Bartholdsson, Sofia; Lagerqvist, Nina; Nord, Hampus et al.

Ingår i European Journal of Clinical Microbiology and Infectious Diseases, s. 1133-1140, 2026

• DOI för Diagnostic value of RT-PCR for detection of tick-borne encephalitis virus RNA in cerebrospinal fluid
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Direct ink writing of collagen scaffolds functionalized with antimicrobial peptides: A proof-of-concept study for bone tissue engineering

Palo-Nieto, Carlos; Echeverri Correa, Estefania; Muhammad, Taj; Mourkas, Evangelos et al.

Ingår i Biomaterials Advances, 2026

• DOI för Direct ink writing of collagen scaffolds functionalized with antimicrobial peptides: A proof-of-concept study for bone tissue engineering
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Drug stock-outs in HIV, tuberculosis, and malaria programs: a systematic review

Pandey, Avaneesh Kumar; Bhandari, Ritika Kondel; Charani, Esmita; Cohn, Jennifer et al.

Ingår i eClinicalMedicine, 2026

• DOI för Drug stock-outs in HIV, tuberculosis, and malaria programs: a systematic review
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Effects of antibiotics encapsulated in hyaluronic acid hydrogels on different osteogenic cells and bacteria

Argyrakis, Dimitrios; Nawale, Ganesh N.; Varghese, Oommen P.; Mourkas, Evangelos et al.

Ingår i Cell and Tissue Research, 2026

• DOI för Effects of antibiotics encapsulated in hyaluronic acid hydrogels on different osteogenic cells and bacteria
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Estimation of Plasma Meropenem Concentrations in Patients with Severe Infections Using Ultraviolet and Visible Range Spectrophotometry: A Pilot Study

Skorup, Paul; Sjövall, Fredrik; Huss, Fredrik; Lipcsey, Miklós

Ingår i European journal of drug metabolism and pharmacokinetics, s. 413-420, 2026

• DOI för Estimation of Plasma Meropenem Concentrations in Patients with Severe Infections Using Ultraviolet and Visible Range Spectrophotometry: A Pilot Study
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Experiences of vancomycin-resistant enterococci carriage - varying and insufficient information from healthcare providers and divergent feelings in everyday life: a qualitative study

Uggla, Karin; Razmi, Robin; Järhult, Josef D.; Knudsen, Kati et al.

Ingår i Infection Prevention in Practice, 2026

• DOI för Experiences of vancomycin-resistant enterococci carriage - varying and insufficient information from healthcare providers and divergent feelings in everyday life: a qualitative study
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Fatal European subtype tick-borne encephalitis in a fully vaccinated immunocompetent child: a case report with viral sequencing

Sondén, Klara; Karlsson Lindsjö, Oskar; Vonlanthen, Sofie; Gisslén, Magnus et al.

Ingår i BMC Infectious Diseases, 2026

• DOI för Fatal European subtype tick-borne encephalitis in a fully vaccinated immunocompetent child: a case report with viral sequencing
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Genomic epidemiology of a 2023–2024 Oropouche virus disease outbreak in Iquitos, Peru: descriptive analysis of a case control study for acute febrile illness

Paredes Olortegui, Maribel; Schiaffino, Francesca; Peñataro Yori, Pablo; Colston, Josh M. et al.

Ingår i The Lancet Regional Health - Americas, 2026

• DOI för Genomic epidemiology of a 2023–2024 Oropouche virus disease outbreak in Iquitos, Peru: descriptive analysis of a case control study for acute febrile illness
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How to perform pharmacokinetic research of antimicrobial drugs in critically ill patients undergoing continuous renal replacement therapy: a scoping review of all relevant pharmacokinetic factors

Wieringa, Andre; Smeets, Tim J. L.; ter Horst, Peter G. J.; Hunfeld, Nicole G. M. et al.

Ingår i Clinical Microbiology and Infection, s. 560-571, 2026

• DOI för How to perform pharmacokinetic research of antimicrobial drugs in critically ill patients undergoing continuous renal replacement therapy: a scoping review of all relevant pharmacokinetic factors
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Impact of Regional Hepatic Immunosuppression With Budesonide on Bacterial Elimination in Porcine Abdominal Sepsis

Hanslin, Katja; Skorup, Paul; Wilske, Frida; Larsson, Anders et al.

Ingår i Acta Anaesthesiologica Scandinavica, 2026

• DOI för Impact of Regional Hepatic Immunosuppression With Budesonide on Bacterial Elimination in Porcine Abdominal Sepsis
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Intravenous anti-P. aeruginosa IgY antibodies increase bacterial concentration in porcine septic shock with bacteremia

Otterbeck, Alexander; Skorup, Paul; Larsson, Anders; Stålberg, Johan et al.

Ingår i Intensive Care Medicine Experimental, 2026

• DOI för Intravenous anti-P. aeruginosa IgY antibodies increase bacterial concentration in porcine septic shock with bacteremia

Meeting the 2024 UN General Assembly declaration targets on antimicrobial resistance

Laxminarayan, Ramanan; Limmathurotsakul, Direk; de Abreu, Andre Luiz; Alimi, Yewande et al.

Ingår i The Lancet, s. 195-198, 2026

• DOI för Meeting the 2024 UN General Assembly declaration targets on antimicrobial resistance

Multicenter evaluation of the QuickMIC® rapid AST system in clinical practice: impact on turnaround time compared to routine AST systems

Olsson, Anna; Rafeletou, Alexandra; Aman, Amanda; Athanasiou, Nicolette et al.

Ingår i European Journal of Clinical Microbiology and Infectious Diseases, s. 185-196, 2026

• DOI för Multicenter evaluation of the QuickMIC® rapid AST system in clinical practice: impact on turnaround time compared to routine AST systems
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Pre-existing systemic inflammation impairs bacterial clearance in the spleen

Hanslin, Katja; Skorup, Paul; Wilske, Frida; Larsson, Anders et al.

Ingår i Intensive Care Medicine Experimental, 2026

• DOI för Pre-existing systemic inflammation impairs bacterial clearance in the spleen
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Protocols for genomic epidemiology and source attribution of enteric bacteria causing diarrhoeal disease across Africa

Badji, Henry; Pascoe, Ben; Goforth, Madison P.; Mourkas, Evangelos et al.

Ingår i BMJ Open, 2026

• DOI för Protocols for genomic epidemiology and source attribution of enteric bacteria causing diarrhoeal disease across Africa
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Rapid AST in practice - a workflow analysis of the QuickMIC^® rapid AST system at multiple clinical laboratories in Europe

Åhman, Amanda Kindvall; Englöf, Victor; Knagge, Kajsa; Reibenspies, Lucas et al.

Ingår i Frontiers in Cellular and Infection Microbiology, 2026

• DOI för Rapid AST in practice - a workflow analysis of the QuickMIC^® rapid AST system at multiple clinical laboratories in Europe
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The wild, wild west of plasmids: First insights into comparative genomics of Borrelia burgdorferi sensu lato

Hepner, Sabrina; Rollins, Robert E.; Mourkas, Evangelos; Kuleshov, Konstantin et al.

Ingår i PLOS ONE, 2026

• DOI för The wild, wild west of plasmids: First insights into comparative genomics of Borrelia burgdorferi sensu lato
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Time to rethink Blastocystis in faecal microbiota transplantation

Krifors, Anders; Larsson, Torbjörn; Wangdah, Andreas; Stensvold, C. Rune

Ingår i Trends in Parasitology, s. 439-441, 2026

• DOI för Time to rethink Blastocystis in faecal microbiota transplantation

Using Ongoing Wildlife Surveillance Programs to Monitor Antibiotic Resistant Bacteria in the Environment

Rincon-Gracia, Maria; Borjesson, Stefan; Soderlund, Robert; Woksepp, Hanna et al.

Ingår i Environmental Microbiology Reports, 2026

• DOI för Using Ongoing Wildlife Surveillance Programs to Monitor Antibiotic Resistant Bacteria in the Environment
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A core genome MLST scheme for Borrelia burgdorferi sensu lato improves insights into the evolutionary history of the species complex

Hepner, Sabrina; Jolley, Keith A.; Castillo-Ramirez, Santiago; Mourkas, Evangelos et al.

Ingår i Cell Reports Methods, s. 100935, 2025

• DOI för A core genome MLST scheme for Borrelia burgdorferi sensu lato improves insights into the evolutionary history of the species complex
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A human pan-disease blood atlas of the circulating proteome

Álvez, María Bueno; Bergström, Sofia; Kenrick, Josefin; Johansson, Emil et al.

Ingår i Science, 2025

• DOI för A human pan-disease blood atlas of the circulating proteome

A systematic review of antibiotic drug shortages and the strategies employed for managing these shortages

Pandey, Avaneesh Kumar; Cohn, Jennifer; Nampoothiri, Vrinda; Gadde, Uttara et al.

Ingår i Clinical Microbiology and Infection, s. 345-353, 2025

• DOI för A systematic review of antibiotic drug shortages and the strategies employed for managing these shortages
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Adverse drug reactions following SARS-CoV-2 vaccination of 3805 healthcare workers cause substantial sick-leave and are correlated to vaccine regimen, age, sex and serological response

Lidström, Anna-Karin; Albinsson, Bo; Sund, Fredrik; Lindbäck, Johan et al.

Ingår i Vaccine, 2025

• DOI för Adverse drug reactions following SARS-CoV-2 vaccination of 3805 healthcare workers cause substantial sick-leave and are correlated to vaccine regimen, age, sex and serological response
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An integrative and translational PKPD modelling approach to explore the combined effect of polymyxin B and minocycline against Klebsiella pneumoniae

Zhao, Chenyan; van den Berg, Sanne; Wang, Zhigang; Olsson, Anna et al.

Ingår i International Journal of Antimicrobial Agents, 2025

• DOI för An integrative and translational PKPD modelling approach to explore the combined effect of polymyxin B and minocycline against Klebsiella pneumoniae
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Comprised access to antibiotics d the growing problem of availability and responsible use

Tängdén, Thomas; Charani, Esmita

Ingår i Clinical Microbiology and Infection, s. 331-332, 2025

• DOI för Comprised access to antibiotics d the growing problem of availability and responsible use

Enhancing glioblastoma therapy: unveiling synergistic anticancer effects of Onalespib - radiotherapy combination therapy

Uffenorde, Julia; Hariri, Mehran; Papalanis, Eleftherios; Staffas, Annika et al.

Ingår i Frontiers in Oncology, 2025

• DOI för Enhancing glioblastoma therapy: unveiling synergistic anticancer effects of Onalespib - radiotherapy combination therapy
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Enteric bacteria from a One Health perspective: fecal indicators and antibiotic resistance

Daabag Elmarghani, Ebraheem

2025

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Evaluation of ceftazidime/avibactam in combination with colistin against KPC-2-producing Klebsiella pneumoniae in static and dynamic time-kill experiments

Allander, Lisa; Vikdahl, Emma; Chatzopoulou, Margarita; O'Jeanson, Amaury et al.

Ingår i JAC - Antimicrobial Resistance, 2025

• DOI för Evaluation of ceftazidime/avibactam in combination with colistin against KPC-2-producing Klebsiella pneumoniae in static and dynamic time-kill experiments
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Explainability for NLP in Pharmacovigilance: A Study on Adverse Event Report Triage in Swedish

Dürlich, Luise; Bergman, Erik; Larsson, Maria; Dalianis, Hercules et al.

Ingår i Proceedings of the Second Workshop on Patient-Oriented Language Processing (CL4Health), s. 46-68, 2025

• DOI för Explainability for NLP in Pharmacovigilance: A Study on Adverse Event Report Triage in Swedish

Factors associated with health-related quality of life 1 year after COVID-19: a cross-sectional study in Sweden

Kisiel, Marta; Janols, Helena; Hiller, Adriana-Maria; Forsell, Christoffer et al.

Ingår i Upsala Journal of Medical Sciences, 2025

• DOI för Factors associated with health-related quality of life 1 year after COVID-19: a cross-sectional study in Sweden
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Genomic insights into extended-spectrum β-lactamase- and plasmid-borne AmpC-producing Escherichia coli transmission between humans and livestock in rural Cambodia

Elmarghani, Ebraheem D.; Pettersson, John H.-O.; Atterby, Clara; Hickman, Rachel A. et al.

Ingår i Journal of Medical Microbiology, 2025

• DOI för Genomic insights into extended-spectrum β-lactamase- and plasmid-borne AmpC-producing Escherichia coli transmission between humans and livestock in rural Cambodia
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Global distribution of antimicrobial resistance genes in Escherichia coli isolated from wild animals using genomes available in public databases

Assefa, Andnet Yirga; Garcias, Biel; Mourkas, Evangelos; Molina-López, Rafael A. et al.

Ingår i Science of the Total Environment, 2025

• DOI för Global distribution of antimicrobial resistance genes in Escherichia coli isolated from wild animals using genomes available in public databases
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HDV RNA Assays: Performance characteristics, clinical utility and challenges

Wedemeyer, Heiner; Leus, Mitchell; Battersby, Thomas R.; Glenn, Jeffrey et al.

Ingår i Hepatology, s. 637-650, 2025

• DOI för HDV RNA Assays: Performance characteristics, clinical utility and challenges
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Heterogeneity and metabolic diversity among Enterococcus species during long-term colonization

Karlsson, Philip A.; Zhang, Taoran; Järhult, Josef D.; Joffré, Enrique et al.

Ingår i Microbiology Spectrum, 2025

• DOI för Heterogeneity and metabolic diversity among Enterococcus species during long-term colonization
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Immunomodulation by extracorporeal ozone-based bactericide system in porcine Pseudomonas aeruginosa septic shock

Rundgren, Henrik; Sjoholm, Johan; Juric, Sanja; Janson, Pellina et al.

Ingår i Scientific Reports, 2025

• DOI för Immunomodulation by extracorporeal ozone-based bactericide system in porcine Pseudomonas aeruginosa septic shock
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Impact of a smartphone application for appropriate antibiotic prescribing at three tertiary hospitals: an international, multicentre stepped-wedge cluster randomized trial

Helou, Ramzy I.; Catho, Gaud; Faxén, Lisa; Hulscher, Marlies et al.

Ingår i Clinical Microbiology and Infection, s. 1172-1179, 2025

• DOI för Impact of a smartphone application for appropriate antibiotic prescribing at three tertiary hospitals: an international, multicentre stepped-wedge cluster randomized trial
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Introducing new antibiotics for multidrug-resistant bacteria: obstacles and the way forward

Tängdén, Thomas; Carrara, Elena; Hellou, Mona Mustafa; Yahav, Dafna et al.

Ingår i Clinical Microbiology and Infection, s. 354-359, 2025

• DOI för Introducing new antibiotics for multidrug-resistant bacteria: obstacles and the way forward
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'Introducing new antibiotics for multidrug-resistant bacteria: obstacles and the way forward' - author's response

Tängdén, Thomas; Carrara, Elena; Hellou, Mona Mustafa; Yahav, Dafna et al.

Ingår i Clinical Microbiology and Infection, s. 871-872, 2025

• DOI för 'Introducing new antibiotics for multidrug-resistant bacteria: obstacles and the way forward' - author's response

Isolation, characterization and phylogenetic analyses of avian influenza A (H9N2) viruses isolated from poultry between 2019 and 2023 in Egypt

Mosaad, Zienab; Hagag, Naglaa M.; Elsayed, Moataz M.; Mady, Wesam H. et al.

Ingår i BMC Veterinary Research, 2025

• DOI för Isolation, characterization and phylogenetic analyses of avian influenza A (H9N2) viruses isolated from poultry between 2019 and 2023 in Egypt
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Low frequency of N-methyl-D-aspartate receptor autoimmunity in tick-borne encephalitis

Moren, Jakob; Persson, Barbro; Sörman, Anna; Lundkvist, Åke et al.

Ingår i PLOS ONE, 2025

• DOI för Low frequency of N-methyl-D-aspartate receptor autoimmunity in tick-borne encephalitis
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Maximum lifespan and brain size in mammals are associated with gene family size expansion related to immune system functions

Kilili, Huseyin; Padilla-Morales, Benjamin; Castillo-Morales, Atahualpa; Monzón-Sandoval, Jimena et al.

Ingår i Scientific Reports, 2025

• DOI för Maximum lifespan and brain size in mammals are associated with gene family size expansion related to immune system functions
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Model-informed precision dosing of vancomycin in clinical practice: an intervention development study

Swartling, Maria; Hamberg, Anna-Karin; Furebring, Mia; Tängdén, Thomas et al.

Ingår i International Journal of Clinical Pharmacy, s. 178-186, 2025

• DOI för Model-informed precision dosing of vancomycin in clinical practice: an intervention development study
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Mortality in epilepsy following brain infections in adults: A register-based population-wide study

Zelano, Johan; Westman, Gabriel

Ingår i Seizure, s. 180-184, 2025

• DOI för Mortality in epilepsy following brain infections in adults: A register-based population-wide study
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Prevalence, misclassification, and clinical consequences of the heteroresistant phenotype in Escherichia coli bloodstream infections in patients in Uppsala, Sweden: a retrospective cohort study

Heyman, Gabriel; Jonsson, Sofia; Fatsis-Kavalopoulos, Nikos; Hjort, Karin et al.

Ingår i The Lancet Microbe, 2025

• DOI för Prevalence, misclassification, and clinical consequences of the heteroresistant phenotype in Escherichia coli bloodstream infections in patients in Uppsala, Sweden: a retrospective cohort study
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Refractory and Resistant Herpes Simplex Virus Mucocutaneous Infections in Immunocompromised Patients: Literature Review and Proposed Definitions for Use in Clinical Trials

Chemaly, Roy F.; Shafat, Tali; Wald, Anna; Kotton, Camille N. et al.

Ingår i Clinical Infectious Diseases, s. 593-601, 2025

• DOI för Refractory and Resistant Herpes Simplex Virus Mucocutaneous Infections in Immunocompromised Patients: Literature Review and Proposed Definitions for Use in Clinical Trials