Hanna Kultima

Inter- and intra-breed genome-wide copy number diversity in a large cohort of European equine breeds

Sole, Marina; Ablondi, Michela; Binzer, Amrei; Velie, Brandon D. et al.

Ingår i BMC Genomics, 2019

• DOI för Inter- and intra-breed genome-wide copy number diversity in a large cohort of European equine breeds
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Primary glioblastoma cells for precision medicine: a quantitative portrait of genomic (in)stability during the first 30 passages

Baskaran, Sathishkumar; Mayrhofer, Markus; Göransson Kultima, Hanna; Bergström, Tobias et al.

Ingår i Neuro-Oncology, s. 1080-1091, 2018

• DOI för Primary glioblastoma cells for precision medicine: a quantitative portrait of genomic (in)stability during the first 30 passages
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DNA METHYLATION PROFILING IN CHRONIC LYMPHOCYTIC LEUKEMIA PATIENTS CARRYING STEREOTYPED B-CELL RECEPTORS: A DIFFERENT CELLULAR ORIGIN FOR SUBSET #2?

Bhoi, Sujata; Mansouri, Larry; Castellano, G.; Sutton, Lesley Ann et al.

Ingår i Haematologica, s. 68-68, 2017

Gene expression profiles in preterm infants on continuous long-term oxygen therapy suggest reduced oxidative stress-dependent signaling during hypoxia

Kalikstad, Betty; Göransson Kultima, Hanna; Andersstuen, Terese Kristoffersen; Klungland, Arne et al.

Ingår i Molecular Medicine Reports, s. 1513-1526, 2017

• DOI för Gene expression profiles in preterm infants on continuous long-term oxygen therapy suggest reduced oxidative stress-dependent signaling during hypoxia
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Intratumoral genome diversity parallels progression and predicts outcome in pediatric cancer

Mengelbier, Linda Holmquist; Karlsson, Jenny; Lindgren, David; Valind, Anders et al.

Ingår i Nature Communications, 2015

• DOI för Intratumoral genome diversity parallels progression and predicts outcome in pediatric cancer

Inter- and intra-breed genome-wide copy number diversity in a large cohort of European equine breeds

Sole, Marina; Ablondi, Michela; Binzer, Amrei; Velie, Brandon D. et al.

Ingår i BMC Genomics, 2019

• DOI för Inter- and intra-breed genome-wide copy number diversity in a large cohort of European equine breeds
• Ladda ner fulltext (pdf) av Inter- and intra-breed genome-wide copy number diversity in a large cohort of European equine breeds

Primary glioblastoma cells for precision medicine: a quantitative portrait of genomic (in)stability during the first 30 passages

Baskaran, Sathishkumar; Mayrhofer, Markus; Göransson Kultima, Hanna; Bergström, Tobias et al.

Ingår i Neuro-Oncology, s. 1080-1091, 2018

• DOI för Primary glioblastoma cells for precision medicine: a quantitative portrait of genomic (in)stability during the first 30 passages
• Ladda ner fulltext (pdf) av Primary glioblastoma cells for precision medicine: a quantitative portrait of genomic (in)stability during the first 30 passages

DNA METHYLATION PROFILING IN CHRONIC LYMPHOCYTIC LEUKEMIA PATIENTS CARRYING STEREOTYPED B-CELL RECEPTORS: A DIFFERENT CELLULAR ORIGIN FOR SUBSET #2?

Bhoi, Sujata; Mansouri, Larry; Castellano, G.; Sutton, Lesley Ann et al.

Ingår i Haematologica, s. 68-68, 2017

Gene expression profiles in preterm infants on continuous long-term oxygen therapy suggest reduced oxidative stress-dependent signaling during hypoxia

Kalikstad, Betty; Göransson Kultima, Hanna; Andersstuen, Terese Kristoffersen; Klungland, Arne et al.

Ingår i Molecular Medicine Reports, s. 1513-1526, 2017

• DOI för Gene expression profiles in preterm infants on continuous long-term oxygen therapy suggest reduced oxidative stress-dependent signaling during hypoxia
• Ladda ner fulltext (pdf) av Gene expression profiles in preterm infants on continuous long-term oxygen therapy suggest reduced oxidative stress-dependent signaling during hypoxia

Intratumoral genome diversity parallels progression and predicts outcome in pediatric cancer

Mengelbier, Linda Holmquist; Karlsson, Jenny; Lindgren, David; Valind, Anders et al.

Ingår i Nature Communications, 2015

• DOI för Intratumoral genome diversity parallels progression and predicts outcome in pediatric cancer

Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer

Birgisson, Helgi; Edlund, Karolina; Wallin, Ulrik; Påhlman, Lars et al.

Ingår i BMC Cancer, 2015

• DOI för Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer
• Ladda ner fulltext (pdf) av Microsatellite instability and mutations in BRAF and KRAS are significant predictors of disseminated disease in colon cancer

1p36 deletion is a marker for tumour dissemination in microsatellite stable stage II-III colon cancer

Mayrhofer, Markus; Kultima, Hanna Göransson; Birgisson, Helgi; Sundström, Magnus et al.

Ingår i BMC Cancer, s. 872, 2014

• DOI för 1p36 deletion is a marker for tumour dissemination in microsatellite stable stage II-III colon cancer
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AKN-028 induces cell cycle arrest, downregulation of Myc associated genes and a dose dependent reduction of kinase activity in acute myeloid leukemia

Eriksson, Anna; Kalushkova, Antonia; Jarvius, Malin; Hilhorst, Riet et al.

Ingår i Biochemical Pharmacology, s. 284-291, 2014

• DOI för AKN-028 induces cell cycle arrest, downregulation of Myc associated genes and a dose dependent reduction of kinase activity in acute myeloid leukemia
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Synergistic interactions between camptothecin and EGFR or RAC1 inhibitors and between imatinib and Notch signaling or RAC1 inhibitors in glioblastoma cell lines

Sooman, Linda; Ekman, Simon; Andersson, Claes; Kultima, Hanna Göransson et al.

Ingår i Cancer Chemotherapy and Pharmacology, s. 329-340, 2013

• DOI för Synergistic interactions between camptothecin and EGFR or RAC1 inhibitors and between imatinib and Notch signaling or RAC1 inhibitors in glioblastoma cell lines

450K-array analysis of chronic lymphocytic leukemia cells reveals global DNA methylation to be relatively stable over time and similar in resting and proliferative compartments.

Cahill, Nicola; Bergh, A-C; Kanduri, M; Göransson-Kultima, H et al.

Ingår i Leukemia, s. 150-158, 2013

• DOI för 450K-array analysis of chronic lymphocytic leukemia cells reveals global DNA methylation to be relatively stable over time and similar in resting and proliferative compartments.

Impaired autophagy, chaperone expression, and protein synthesis in response to critical illness interventions in porcine skeletal muscle

Banduseela, Varuna; Chen, Yi-wen; Göransson Kultima, Hanna; Norman, Holly et al.

Ingår i Physiological Genomics, s. 477-486, 2013

• DOI för Impaired autophagy, chaperone expression, and protein synthesis in response to critical illness interventions in porcine skeletal muscle

Mantle cell lymphoma displays a homogenous methylation profile: A comparative analysis with chronic lymphocytic leukemia

Halldorsdottir, Anna Margret; Kanduri, Meena; Marincevic, Millaray; Mansouri, Larry et al.

Ingår i American Journal of Hematology, s. 361-367, 2012

• DOI för Mantle cell lymphoma displays a homogenous methylation profile: A comparative analysis with chronic lymphocytic leukemia

Synergistic Effects of PI3K or P38 MAPK Inhibition in Combination With Vandetanib Treatment in Glioblastoma Cells

Sooman, Linda; Ekman, Simon; Andersson, Claes; Johansson, Fredrik et al.

Ingår i European Journal of Cancer, 2012

• DOI för Synergistic Effects of PI3K or P38 MAPK Inhibition in Combination With Vandetanib Treatment in Glioblastoma Cells

Digital gene expression profiling of primary acute lymphoblastic leukemia cells

Nordlund, Jessica; Kiialainen, Anna; Karlberg, Olof; Berglund, Eva C et al.

Ingår i Leukemia, s. 1218-1227, 2012

• DOI för Digital gene expression profiling of primary acute lymphoblastic leukemia cells

A comprehensive analysis of human gene expression profiles identifies stromal immunoglobulin kappa C as a compatible prognostic marker in human solid tumors

Schmidt, Marcus; Hellwig, Birte; Hammad, Seddik; Othman, Amnah et al.

Ingår i Clinical Cancer Research, s. 2695-2703, 2012

• DOI för A comprehensive analysis of human gene expression profiles identifies stromal immunoglobulin kappa C as a compatible prognostic marker in human solid tumors

Distinct transcriptional control in major immunogenetic subsets of chronic lymphocytic leukemia exhibiting subset-biased global DNA methylation profiles

Kanduri, Meena; Marincevic, Millaray; Halldórsdóttir, Anna M; Mansouri, Larry et al.

Ingår i Epigenetics : official journal of the DNA Methylation Society, s. 1435-1442, 2012

• DOI för Distinct transcriptional control in major immunogenetic subsets of chronic lymphocytic leukemia exhibiting subset-biased global DNA methylation profiles

Allele-specific copy number analysis of tumor samples with aneuploidy and tumor heterogeneity

Rasmussen, Markus; Sundström, Magnus; Kultima, Hanna Göransson; Botling, Johan et al.

Ingår i Genome Biology, 2011

• DOI för Allele-specific copy number analysis of tumor samples with aneuploidy and tumor heterogeneity
• Ladda ner fulltext (pdf) av Allele-specific copy number analysis of tumor samples with aneuploidy and tumor heterogeneity

Muscle wasting and the temporal gene expression pattern in a novel rat intensive care unit model

Llano-Diez, Monica; Gustafson, Ann-Marie; Olsson, Carl; Göransson, Hanna et al.

Ingår i BMC Genomics, s. 602, 2011

• DOI för Muscle wasting and the temporal gene expression pattern in a novel rat intensive care unit model
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High-resolution genomic screening in mantle cell lymphoma: specific changes correlate with genomic complexity, the proliferation signature and survival

Halldórsdóttir, Anna M.; Sander, Birgitta; Göransson, Hanna; Isaksson, Anders et al.

Ingår i Genes, Chromosomes and Cancer, s. 113-121, 2011

• DOI för High-resolution genomic screening in mantle cell lymphoma: specific changes correlate with genomic complexity, the proliferation signature and survival

Targeted resequencing of candidate genes using Selector Probes

Johansson, Henrik; Isaksson, Magnus; Sörqvist, Elin Falk; Roos, F. et al.

Ingår i Nucleic Acids Research, 2011

• DOI för Targeted resequencing of candidate genes using Selector Probes

Gene Copy Number Aberrations Are Associated with Survival in Histologic Subgroups of Non-small Cell Lung Cancer

Micke, Patrick; Edlund, Karolina; Holmberg, Lars; Göransson Kultima, Hanna et al.

Ingår i Journal of Thoracic Oncology, s. 1833-1840, 2011

• DOI för Gene Copy Number Aberrations Are Associated with Survival in Histologic Subgroups of Non-small Cell Lung Cancer

Array-based genomic screening at diagnosis and during follow-up in chronic lymphocytic leukemia

Gunnarsson, Rebeqa; Mansouri, Larry; Isaksson, Anders; Göransson, Hanna et al.

Ingår i Haematologica, s. 1161-1169, 2011

• DOI för Array-based genomic screening at diagnosis and during follow-up in chronic lymphocytic leukemia

Mechanisms underlying the sparing of masticatory versus limb muscle function in an experimental critical illness model

Aare, Sudhakar; Ochala, Julien; Norman, Holly S; Radell, Peter et al.

Ingår i Physiological Genomics, s. 1334-1350, 2011

• DOI för Mechanisms underlying the sparing of masticatory versus limb muscle function in an experimental critical illness model

Differential genome-wide array-based methylation profiles in prognostic subsets of chronic lymphocytic leukemia

Kanduri, Meena; Cahill, Nicola; Göransson, Hanna; Enström, Camilla et al.

Ingår i Blood, s. 296-305, 2010

• DOI för Differential genome-wide array-based methylation profiles in prognostic subsets of chronic lymphocytic leukemia

Distinct gene expression profiles in subsets of chronic lymphocytic leukemia expressing stereotyped IGHV4-34 B cell receptors

Marincevic, Millaray; Mansouri, Mahmoud; Kanduri, Meena; Isaksson, Anders et al.

Ingår i Haematologica, s. 2072-2079, 2010

• DOI för Distinct gene expression profiles in subsets of chronic lymphocytic leukemia expressing stereotyped IGHV4-34 B cell receptors

Alpha Terpineol: A Potential Anticancer Agent which Acts through Suppressing NF-kappa B Signalling

Hassan, Saadia Bashir; Gali-Muhtasib, Hala; Göransson, Hanna; Larsson, Rolf

Ingår i Anticancer Research, s. 1911-1919, 2010

High-density screening reveals a different spectrum of genomic aberrations in chronic lymphocytic leukemia patients with 'stereotyped' IGHV3-21 and IGHV4-34 B-cell receptors

Marincevic, Millaray; Cahill, Nicola; Isaksson, Anders; Mansouri, Mahmoud Reza et al.

Ingår i Haematologica, s. 1519-1525, 2010

• DOI för High-density screening reveals a different spectrum of genomic aberrations in chronic lymphocytic leukemia patients with 'stereotyped' IGHV3-21 and IGHV4-34 B-cell receptors

Improving Bayesian credibility intervals for classifier error rates using maximum entropy empirical priors

Gustafsson, Mats G.; Wallman, Mikael; Wickenberg-Bolin, Ulrika; Göransson, Hanna et al.

Ingår i Artificial Intelligence in Medicine, s. 93-104, 2010

• DOI för Improving Bayesian credibility intervals for classifier error rates using maximum entropy empirical priors

Extensive expression of craniofacial related homeobox genes in canine mammary sarcomas

Wensman, Helena; Göransson, Hanna; Leuchowius, Karl-Johan; Strömberg, Sara et al.

Ingår i Breast Cancer Research and Treatment, s. 333-343, 2009

• DOI för Extensive expression of craniofacial related homeobox genes in canine mammary sarcomas

Quantification of normal cell fraction and copy number neutral LOH in clinical lung cancer samples using SNP array data

Göransson, Hanna; Edlund, Karolina; Rydåker, Maria; Rasmussen, Markus et al.

Ingår i PloS one, 2009

• DOI för Quantification of normal cell fraction and copy number neutral LOH in clinical lung cancer samples using SNP array data

Gene expression and muscle fiber function in a porcine ICU model

Banduseela, Varuna C.; Ochala, Julien; Chen, Yi-Wen; Göransson, Hanna et al.

Ingår i Physiological Genomics, s. 141-159, 2009

• DOI för Gene expression and muscle fiber function in a porcine ICU model

Gene Expression Analysis of Kidneys From Transgenic Mice Expressing Fibroblast Growth Factor-23

Marsell, Richard; Krajisnik, Tijana; Göransson, Hanna; Ohlsson, Claes et al.

Ingår i Nephrology, Dialysis and Transplantation, s. 827-833, 2008

• DOI för Gene Expression Analysis of Kidneys From Transgenic Mice Expressing Fibroblast Growth Factor-23

Segmentation-based detection of allelic imbalance and loss-of-heterozygosity in cancer cells using whole genome SNP arrays.

Staaf, Johan; Lindgren, David; Vallon-Christersson, Johan; Isaksson, Anders et al.

Ingår i Genome biology, 2008

• DOI för Segmentation-based detection of allelic imbalance and loss-of-heterozygosity in cancer cells using whole genome SNP arrays.

Gene expression signature-based chemcial genomics and activity pattern in a panel of tumour cell lines propose linalyl acetate as a protein kinase/NF-κB inhibitor

Hassan, Saadia; Lindhagen, Elin; Göransson, Hanna; Fryknäs, Mårten et al.

Ingår i Gene Therapy and Molecular Biology, s. 359-370, 2008

Cross-validation and bootstrapping are unreliable in small sample classification

Isaksson, Anders; Wallman, M.; Göransson, Hanna; Gustafsson, Mats.G.

Ingår i Pattern Recognition Letters, s. 1960-1965, 2008

• DOI för Cross-validation and bootstrapping are unreliable in small sample classification

Screening for copy-number alterations and loss of heterozygosity in chronic lymphocytic leukemia-A comparative study of four differently designed, high resolution microarray platforms

Gunnarsson, Rebeqa; Staaf, Johan; Jansson, Mattias; Ottesen, Anne Marie et al.

Ingår i Genes, Chromosomes and Cancer, s. 697-711, 2008

• DOI för Screening for copy-number alterations and loss of heterozygosity in chronic lymphocytic leukemia-A comparative study of four differently designed, high resolution microarray platforms

Gene expression analysis identifies a genetic signature potentially associated with response to alpha-IFN in chronic phase CML patients

Hagberg, Anette; Olsson-Strömberg, Ulla; Wickenberg-Bolin, Ulrika; Göransson, Hanna et al.

Ingår i Leukemia Research, s. 931-938, 2007

• DOI för Gene expression analysis identifies a genetic signature potentially associated with response to alpha-IFN in chronic phase CML patients

STAT1 signaling is associated with acquired crossresistance to doxorubicin and radiation in myeloma cell lines

Fryknäs, Mårten; Dhar, Sumeer; Öberg, Fredrik; Rickardson, Linda et al.

Ingår i International Journal of Cancer, s. 189-195, 2007

• DOI för STAT1 signaling is associated with acquired crossresistance to doxorubicin and radiation in myeloma cell lines

Improved variance estimation of classification performance via reduction of bias caused by small sample size

Wickenberg Bolin, Ulrika; Göransson, Hanna; Fryknäs, Mårten; Gustafsson, Mats G et al.

Ingår i BMC Bioinformatics, s. 127, 2006

Molecular markers for discrimination of benign and malignant follicular thyroid tumors

Fryknäs, Mårten; Wickenberg Bolin, Ulrika; Göransson, Hanna; Gustafsson, Mats G et al.

Ingår i Tumor Biology, s. 211-220, 2006

• DOI för Molecular markers for discrimination of benign and malignant follicular thyroid tumors

Expression analysis of genes involved in brain tumor progression driven by retroviral insertional mutagenesis in mice

Johansson, Fredrik K; Göransson, Hanna; Westermark, Bengt

Ingår i Oncogene, s. 3896-3905, 2005

• DOI för Expression analysis of genes involved in brain tumor progression driven by retroviral insertional mutagenesis in mice