Sylvain Glemin

Evolution of crop phenotypic spaces through domestication

Wojcik, Arthur; Belcram, Harry; Rousselet, Agnes; Bouet, Manon et al.

Ingår i New Phytologist, s. 1948-1963, 2026

• DOI för Evolution of crop phenotypic spaces through domestication
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Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation

Nicolas, Léa A.; Berdan, Emma L.; Wellenreuther, Maren; Colinet, Hervé et al.

Ingår i Heredity, s. 162-173, 2026

• DOI för Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation
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An angiosperm-wide perspective on reproductive strategies and floral traits

Helmstetter, Andrew J.; Mendez, Marcos; Schönenberger, Jürg; Burgarella, Concetta et al.

Ingår i New Phytologist, s. 1200-1216, 2026

• DOI för An angiosperm-wide perspective on reproductive strategies and floral traits

A Recipe for a Good π. How to Properly Estimate Population Genetics Summary Statistics and Why we Should Systematically Report Them

Brault, Maxence; Brazier, Thomas; Mackintosh, Alexander; Paupe, Anastasia et al.

Ingår i Genome Biology and Evolution, 2026

• DOI för A Recipe for a Good π. How to Properly Estimate Population Genetics Summary Statistics and Why we Should Systematically Report Them
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Genomic consequences of residual recombination in a hybrid apomictic hickory complex

Zhang, Wei-Ping; Glemin, Sylvain; Pang, Xiao-Xu; Kang, Ming et al.

Ingår i Nature Communications, 2026

• DOI för Genomic consequences of residual recombination in a hybrid apomictic hickory complex
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Evolution of crop phenotypic spaces through domestication

Wojcik, Arthur; Belcram, Harry; Rousselet, Agnes; Bouet, Manon et al.

Ingår i New Phytologist, s. 1948-1963, 2026

• DOI för Evolution of crop phenotypic spaces through domestication
• Ladda ner fulltext (pdf) av Evolution of crop phenotypic spaces through domestication

Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation

Nicolas, Léa A.; Berdan, Emma L.; Wellenreuther, Maren; Colinet, Hervé et al.

Ingår i Heredity, s. 162-173, 2026

• DOI för Parallel clines of chromosomal inversion frequencies in seaweed flies are associated with thermal variation
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An angiosperm-wide perspective on reproductive strategies and floral traits

Helmstetter, Andrew J.; Mendez, Marcos; Schönenberger, Jürg; Burgarella, Concetta et al.

Ingår i New Phytologist, s. 1200-1216, 2026

• DOI för An angiosperm-wide perspective on reproductive strategies and floral traits

Genomic consequences of residual recombination in a hybrid apomictic hickory complex

Zhang, Wei-Ping; Glemin, Sylvain; Pang, Xiao-Xu; Kang, Ming et al.

Ingår i Nature Communications, 2026

• DOI för Genomic consequences of residual recombination in a hybrid apomictic hickory complex
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Estimating the Reduction in Genetic Diversity from Background Selection under Non-equilibrium Demography and Partial Selfing

Mackintosh, Alexander; Brault, Maxence; Roze, Denis; Lascoux, Martin et al.

Ingår i Molecular biology and evolution, 2026

• DOI för Estimating the Reduction in Genetic Diversity from Background Selection under Non-equilibrium Demography and Partial Selfing
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Mating system and the evolution of recombination rates in seed plants

Brazier, Thomas; Stetsenko, Roman; Roze, Denis; Glémin, Sylvain

Ingår i Journal of Evolutionary Biology, s. 920-929, 2025

• DOI för Mating system and the evolution of recombination rates in seed plants
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Sex unfolded: sex, asex, sexes

Roze, Denis; Glemin, Sylvain; Lenormand, Thomas; Van Doninck, Karine

Ingår i Journal of Evolutionary Biology, s. 787-797, 2025

• DOI för Sex unfolded: sex, asex, sexes

Mating systems and recombination landscape strongly shape genetic diversity and selection in wheat relatives

Burgarella, Concetta; Bremaud, Marie-Fleur; Von Hirschheydt, Gesa; Viader, Veronique et al.

Ingår i Evolution Letters, s. 866-880, 2024

• DOI för Mating systems and recombination landscape strongly shape genetic diversity and selection in wheat relatives
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Diversity in Recombination Hotspot Characteristics and Gene Structure Shape Fine-Scale Recombination Patterns in Plant Genomes

Brazier, Thomas; Glemin, Sylvain

Ingår i Molecular biology and evolution, 2024

• DOI för Diversity in Recombination Hotspot Characteristics and Gene Structure Shape Fine-Scale Recombination Patterns in Plant Genomes
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RIDGE, a tool tailored to detect gene flow barriers across species pairs

Burban, Ewen; Tenaillon, Maud I.; Glemin, Sylvain

Ingår i Molecular Ecology Resources, 2024

• DOI för RIDGE, a tool tailored to detect gene flow barriers across species pairs
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Polygenic selection to a changing optimum under self-fertilisation

Hartfield, Matthew; Glemin, Sylvain

Ingår i PLOS Genetics, 2024

• DOI för Polygenic selection to a changing optimum under self-fertilisation
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Separating phases of allopolyploid evolution with resynthesized and natural Capsella bursa-pastoris

Duan, Tianlin; Sicard, Adrien; Glemin, Sylvain; Lascoux, Martin

Ingår i eLIFE, 2024

• DOI för Separating phases of allopolyploid evolution with resynthesized and natural Capsella bursa-pastoris
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Parallel loss of sexual reproduction in field populations of a brown alga sheds light on the mechanisms underlying the emergence of asexuality

Hoshino, Masakazu; Cossard, Guillaume; Haas, Fabian B.; Kane, Emma I. et al.

Ingår i Nature Ecology & Evolution, s. 1916-1932, 2024

• DOI för Parallel loss of sexual reproduction in field populations of a brown alga sheds light on the mechanisms underlying the emergence of asexuality
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Joint inference of evolutionary transitions to self-fertilization and demographic history using whole-genome sequences

Strütt, Stefan; Sellinger, Thibaut; Glemin, Sylvain; Tellier, Aurélien et al.

Ingår i eLIFE, 2023

• DOI för Joint inference of evolutionary transitions to self-fertilization and demographic history using whole-genome sequences
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Expression pattern of resynthesized allotetraploid Capsella is determined by hybridization, not whole genome duplication

Duan, Tianlin; Sicard, Adrien; Glémin, Sylvain; Lascoux, Martin

Ingår i New Phytologist, s. 339-353, 2023

• DOI för Expression pattern of resynthesized allotetraploid Capsella is determined by hybridization, not whole genome duplication
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Cosegregation of recombinant chromatids maintains genome-wide heterozygosity in an asexual nematode

Blanc, Caroline; Saclier, Nathanaelle; Le Faou, Ehouarn; Marie-Orleach, Lucas et al.

Ingår i Science Advances, 2023

• DOI för Cosegregation of recombinant chromatids maintains genome-wide heterozygosity in an asexual nematode
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Opposing effects of plant traits on diversification

Anderson, Bruce; Pannell, John; Billiard, Sylvain; Burgarella, Concetta et al.

Ingår i iScience, 2023

• DOI för Opposing effects of plant traits on diversification
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Crop domestication as a step toward reproductive isolation

Tenaillon, Maud I.; Burban, Ewen; Huynh, Stella; Wojcik, Arthur et al.

Ingår i American Journal of Botany, 2023

• DOI för Crop domestication as a step toward reproductive isolation

Trait‐dependent diversification in angiosperms: Patterns, models and data

Helmstetter, Andrew J.; Zenil‐Ferguson, Rosana; Sauquet, Hervé; Otto, Sarah P. et al.

Ingår i Ecology Letters, s. 640-657, 2023

• DOI för Trait‐dependent diversification in angiosperms: Patterns, models and data

Hunting for Beneficial Mutations: Conditioning on SIFT Scores When Estimating the Distribution of Fitness Effect of New Mutations

Chen, Jun; Bataillon, Thomas; Glemin, Sylvain; Lascoux, Martin

Ingår i Genome Biology and Evolution, 2022

• DOI för Hunting for Beneficial Mutations: Conditioning on SIFT Scores When Estimating the Distribution of Fitness Effect of New Mutations
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Diversity and determinants of recombination landscapes in flowering plants

Brazier, Thomas; Glémin, Sylvain

Ingår i PLOS Genetics, 2022

• DOI för Diversity and determinants of recombination landscapes in flowering plants
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Establishment of local adaptation in partly self-fertilizing populations

Trickovic, Bogi; Glemin, Sylvain

Ingår i Genetics, 2022

• DOI för Establishment of local adaptation in partly self-fertilizing populations

Mating system and speciation I: Accumulation of genetic incompatibilities in allopatry

Marie-Orleach, Lucas; Brochmann, Christian; Glemin, Sylvain

Ingår i PLOS Genetics, 2022

• DOI för Mating system and speciation I: Accumulation of genetic incompatibilities in allopatry
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Competitive ability depends on mating system and ploidy level across Capsella species

Orsucci, Marion; Yang, Xuyue; Vanikiotis, Theofilos; Guerrina, Maria et al.

Ingår i Annals of Botany, s. 697-708, 2022

• DOI för Competitive ability depends on mating system and ploidy level across Capsella species
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The relative role of plasticity and demographic history in Capsella bursa-pastoris: a common garden experiment in Asia and Europe

Cornille, Amandine; Tiret, Mathieu; Salcedo, Adriana; Huang, Huirun R. et al.

Ingår i AoB Plants, 2022

• DOI för The relative role of plasticity and demographic history in Capsella bursa-pastoris: a common garden experiment in Asia and Europe
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How broad is the selfing syndrome? Insights from convergent evolution of gene expression across species and tissues in the Capsella genus

Zhang, Zebin; Kryvokhyzha, Dmytro; Orsucci, Marion; Glemin, Sylvain et al.

Ingår i New Phytologist, s. 2344-2357, 2022

• DOI för How broad is the selfing syndrome? Insights from convergent evolution of gene expression across species and tissues in the Capsella genus
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The Road to Sorghum Domestication: Evidence From Nucleotide Diversity and Gene Expression Patterns

Burgarella, Concetta; Berger, Angelique; Glemin, Sylvain; David, Jacques et al.

Ingår i Frontiers in Plant Science, 2021

• DOI för The Road to Sorghum Domestication: Evidence From Nucleotide Diversity and Gene Expression Patterns
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Dioecy Is Associated with High Genetic Diversity and Adaptation Rates in the Plant Genus Silene

Muyle, Aline; Martin, Helene; Zemp, Niklaus; Mollion, Maeva et al.

Ingår i Molecular biology and evolution, s. 805-818, 2021

• DOI för Dioecy Is Associated with High Genetic Diversity and Adaptation Rates in the Plant Genus Silene
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Balancing selection in self-fertilizing populations

Glemin, Sylvain

Ingår i Evolution, s. 1011-1029, 2021

• DOI för Balancing selection in self-fertilizing populations

Analysis of diversity-dependent species evolution using concepts in population genetics

Kaj, Ingemar; Glémin, Sylvain; Tahir, Daniah; Lascoux, Martin

Ingår i Journal of Mathematical Biology, 2021

• DOI för Analysis of diversity-dependent species evolution using concepts in population genetics
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From Drift to Draft: How Much Do Beneficial Mutations Actually Contribute to Predictions of Ohta's Slightly Deleterious Model of Molecular Evolution?

Chen, Jun; Glemin, Sylvain; Lascoux, Martin

Ingår i Genetics, s. 1005-1018, 2020

• DOI för From Drift to Draft: How Much Do Beneficial Mutations Actually Contribute to Predictions of Ohta's Slightly Deleterious Model of Molecular Evolution?

Evolution of putative barrier loci at an intermediate stage of speciation with gene flow in campions (Silene)

Liu, Xiaodong; Glemin, Sylvain; Karrenberg, Sophie

Ingår i Molecular Ecology, s. 3511-3525, 2020

• DOI för Evolution of putative barrier loci at an intermediate stage of speciation with gene flow in campions (Silene)
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Shift in ecological strategy helps marginal populations of shepherd's purse (Capsella bursa-pastoris) to overcome a high genetic load

Orsucci, Marion; Milesi, Pascal; Hansen, Johanna; Girodolle, Johanna et al.

Ingår i Proceedings of the Royal Society of London. Biological Sciences, 2020

• DOI för Shift in ecological strategy helps marginal populations of shepherd's purse (Capsella bursa-pastoris) to overcome a high genetic load
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Modeling a trait-dependent diversification process coupled with molecular evolution on a random species tree

Tahir, Daniah; Glemin, Sylvain; Lascoux, Martin; Kaj, Ingemar

Ingår i Journal of Theoretical Biology, s. 189-203, 2019

• DOI för Modeling a trait-dependent diversification process coupled with molecular evolution on a random species tree

Pervasive hybridizations in the history of wheat relatives

Glemin, Sylvain; Scornavacca, Celine; Dainat, Jacques; Burgarella, Concetta et al.

Ingår i Science Advances, 2019

• DOI för Pervasive hybridizations in the history of wheat relatives
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Estimating the Fitness Effect of Deleterious Mutations During the Two Phases of the Life Cycle: A New Method Applied to the Root-Rot Fungus Heterobasidion parviporum

Clergeot, Pierre-Henri; Rode, Nicolas O.; Glemin, Sylvain; Durling, Mikael Brandstrom et al.

Ingår i Genetics, s. 963-976, 2019

• DOI för Estimating the Fitness Effect of Deleterious Mutations During the Two Phases of the Life Cycle: A New Method Applied to the Root-Rot Fungus Heterobasidion parviporum

Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication

Gros-Balthazard, Muriel; Besnard, Guillaume; Sarah, Gautier; Holtz, Yan et al.

Ingår i The Plant Journal, s. 143-157, 2019

• DOI för Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication
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Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae)

Kryvokhyzha, Dmytro; Salcedo, Adriana; Eriksson, Mimmi C.; Duan, Tianlin et al.

Ingår i PLOS Genetics, 2019

• DOI för Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae)
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Towards the new normal: Transcriptomic convergence and genomic legacy of the two subgenomes of an allopolyploid weed (Capsella bursa-pastoris)

Kryvokhyzha, Dmytro; Milesi, Pascal; Duan, Tianlin; Orsucci, Marion et al.

Ingår i PLOS Genetics, 2019

• DOI för Towards the new normal: Transcriptomic convergence and genomic legacy of the two subgenomes of an allopolyploid weed (Capsella bursa-pastoris)
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Codon Usage Bias in Animals: Disentangling the Effects of Natural Selection, Effective Population Size, and GC-Biased Gene Conversion

Galtier, Nicolas; Roux, Camille; Rousselle, Marjolaine; Romiguier, Jonathan et al.

Ingår i Molecular biology and evolution, s. 1092-1103, 2018

• DOI för Codon Usage Bias in Animals: Disentangling the Effects of Natural Selection, Effective Population Size, and GC-Biased Gene Conversion

Competitive ability of Capsella species with different mating systems and ploidy levels

Mendoza, Sandra Petrone; Lascoux, Martin; Glemin, Sylvain

Ingår i Annals of Botany, s. 1257-1264, 2018

• DOI för Competitive ability of Capsella species with different mating systems and ploidy levels

Evolutionary forces affecting synonymous variations in plant genomes

Clement, Yves; Sarah, Gautier; Holtz, Yan; Homa, Felix et al.

Ingår i PLOS Genetics, 2017

• DOI för Evolutionary forces affecting synonymous variations in plant genomes
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Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data

Tataru, Paula; Mollion, Maeva; Glemin, Sylvain; Bataillon, Thomas

Ingår i Genetics, s. 1103-1119, 2017

• DOI för Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data
• Ladda ner fulltext (pdf) av Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data

Using the Ornstein-Uhlenbeck process to model the evolution of interacting populations

Bartoszek, Krzysztof; Glemin, Sylvain; Kaj, Ingemar; Lascoux, Martin

Ingår i Journal of Theoretical Biology, s. 35-45, 2017

• DOI för Using the Ornstein-Uhlenbeck process to model the evolution of interacting populations

Experimental Evidence for the Negative Effects of Self-Fertilization on the Adaptive Potential of Populations

Noel, Elsa; Jarne, Philippe; Glemin, Sylvain; MacKenzie, Alicia et al.

Ingår i Current Biology, s. 237-242, 2017

• DOI för Experimental Evidence for the Negative Effects of Self-Fertilization on the Adaptive Potential of Populations

Domestication rewired gene expression and nucleotide diversity patterns in tomato

Sauvage, Christopher; Rau, Andrea; Aichholz, Charlotte; Chadoeuf, Joel et al.

Ingår i The Plant Journal, s. 631-645, 2017

• DOI för Domestication rewired gene expression and nucleotide diversity patterns in tomato

Genetic Diversity and the Efficacy of Purifying Selection across Plant and Animal Species

Chen, Jun; Glemin, Sylvain; Lascoux, Martin

Ingår i Molecular biology and evolution, s. 1417-1428, 2017

• DOI för Genetic Diversity and the Efficacy of Purifying Selection across Plant and Animal Species

The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae)

Kryvokhyzha, Dmytro; Holm, Karl; Chen, Jun; Cornille, Amandine et al.

Ingår i Molecular Ecology, s. 1106-1121, 2016

• DOI för The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae)

Evolution of sex chromosomes prior to speciation in the dioecious Phoenix species

Cherif, E.; Zehdi-Azouzi, S.; Crabos, A.; Castillo, K. et al.

Ingår i Journal of Evolutionary Biology, s. 1513-1522, 2016

• DOI för Evolution of sex chromosomes prior to speciation in the dioecious Phoenix species

Limits to Adaptation in Partially Selfing Species

Hartfield, Matthew; Glemin, Sylvain

Ingår i Genetics, s. 959-+, 2016

• DOI för Limits to Adaptation in Partially Selfing Species

Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd's purse (Capsella bursa-pastoris)

Cornille, Amandine; Salcedo, A.; Kryvokhyzha, Dmytro; Glemin, Sylvain et al.

Ingår i Molecular Ecology, s. 616-629, 2016

• DOI för Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd's purse (Capsella bursa-pastoris)

Quantification of GC-biased gene conversion in the human genome

Glemin, Sylvain; Arndt, Peter F.; Messer, Philipp W.; Petrov, Dmitri et al.

Ingår i Genome Research, s. 1215-1228, 2015

• DOI för Quantification of GC-biased gene conversion in the human genome
• Ladda ner fulltext (pdf) av Quantification of GC-biased gene conversion in the human genome

Extreme Recombination Frequencies Shape Genome Variation and Evolution in the Honeybee, Apis mellifera

Wallberg, Andreas; Glemin, Sylvain; Webster, Matthew T.

Ingår i PLOS Genetics, 2015

• DOI för Extreme Recombination Frequencies Shape Genome Variation and Evolution in the Honeybee, Apis mellifera
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Introns Structure Patterns of Variation in Nucleotide Composition in Arabidopsis thaliana and Rice Protein-Coding Genes

Ressayre, Adrienne; Glemin, Sylvain; Montalent, Pierre; Serre-Giardi, Laurana et al.

Ingår i Genome Biology and Evolution, s. 2913-2928, 2015

• DOI för Introns Structure Patterns of Variation in Nucleotide Composition in Arabidopsis thaliana and Rice Protein-Coding Genes
• Ladda ner fulltext (pdf) av Introns Structure Patterns of Variation in Nucleotide Composition in Arabidopsis thaliana and Rice Protein-Coding Genes

A Recipe for a Good π. How to Properly Estimate Population Genetics Summary Statistics and Why we Should Systematically Report Them

Brault, Maxence; Brazier, Thomas; Mackintosh, Alexander; Paupe, Anastasia et al.

Ingår i Genome Biology and Evolution, 2026

• DOI för A Recipe for a Good π. How to Properly Estimate Population Genetics Summary Statistics and Why we Should Systematically Report Them
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How Does Selfing Affect the Pace and Process of Speciation?

Marie-Orleach, Lucas; Glémin, Sylvain; Brandrud, Marie K.; Brysting, Anne K. et al.

Ingår i Cold Spring Harbor Perspectives in Biology, 2024

• DOI för How Does Selfing Affect the Pace and Process of Speciation?

What does the distribution of fitness effects of new mutations reflect?: Insights from plants

Chen, Jun; Bataillon, Thomas; Glemin, Sylvain; Lascoux, Martin

Ingår i New Phytologist, s. 1613-1619, 2022

• DOI för What does the distribution of fitness effects of new mutations reflect?: Insights from plants
• Ladda ner fulltext (pdf) av What does the distribution of fitness effects of new mutations reflect?: Insights from plants

The Evolutionary Interplay between Adaptation and Self-Fertilization

Hartfield, Matthew; Bataillon, Thomas; Glemin, Sylvain

Ingår i Trends in Genetics, s. 420-431, 2017

• DOI för The Evolutionary Interplay between Adaptation and Self-Fertilization

Genomic divergence and reproductive isolation in Silene

Liu, Xiaodong; Glemin, Sylvain; Karrenberg, Sophie